| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,335,172 | G→T | 9.0% | A120S (GCC→TCC) | yciM → | envelope integrity maintenance protein; EnvC‑interacting protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,335,172 | 0 | G | T | 9.0% | 634.3 / 25.1 | 177 | A120S (GCC→TCC) | yciM | envelope integrity maintenance protein; EnvC‑interacting protein |
| Reads supporting (aligned to +/- strand): ref base G (64/97); new base T (10/6); total (74/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 181 total aligned reads displayed.
GCCCACCTTACGCTCGGAAACCTGTTCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAACGCCTGGTGA > CP009273/1335025‑1335319 | ccTTACGCTCGGAAACCTGTTCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCggg > 1:1607078/1‑148 (MQ=255) ccTTACGCTCGGAAACCTGTTCCGTTCGCGTGGCGAAGTTGATCGCGATATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCggg < 1:2501986/148‑1 (MQ=255) aCGCTCGGAAACCTGTTCCGTTAGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTACTGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTtat < 1:2087251/148‑1 (MQ=255) gCTCGGAAACCTGTTCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTatat < 1:538695/148‑1 (MQ=255) cTCGGAAACCTGTTCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATg > 2:1686599/1‑148 (MQ=255) tCGGAAACCTGTTCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGa < 1:1549640/148‑1 (MQ=255) gAAACCTGTTCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACcg > 2:2366601/1‑148 (MQ=255) aaaCCTGTTCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACcgc > 1:2107357/1‑148 (MQ=255) aaCCTGTTCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACcgcg < 2:829605/148‑1 (MQ=255) cTGTTCCGTTCGCATGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCgg > 2:307244/1‑148 (MQ=255) tGTTCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGa > 2:278417/1‑148 (MQ=255) ttCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAg < 2:429487/148‑1 (MQ=255) ttCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAg < 2:429523/148‑1 (MQ=255) tCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGa > 2:1408616/1‑148 (MQ=255) ttCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATg > 1:811369/1‑148 (MQ=255) ttCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATg < 1:12024/148‑1 (MQ=255) cgcgTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGtt < 1:2428575/148‑1 (MQ=255) cgcgTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGtt < 1:328410/148‑1 (MQ=255) cgcgTGGCGAAGTTGATCGCGCTATTCGCATCCATCACACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGtt < 1:171385/148‑1 (MQ=255) tGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCATAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAAt < 1:2487426/148‑1 (MQ=255) ggCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTCATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATc > 1:419851/1‑148 (MQ=255) cGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAg < 2:298194/148‑1 (MQ=255) gAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGc < 2:54475/148‑1 (MQ=255) aTCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGa < 2:2568447/148‑1 (MQ=255) cgcgCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATg > 1:1253827/1‑148 (MQ=255) gcTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGaaa < 2:249730/148‑1 (MQ=255) ttCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGa < 1:2922290/148‑1 (MQ=255) ttCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGa < 1:2922268/148‑1 (MQ=255) ttCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGa > 2:1694617/1‑148 (MQ=255) gCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACtt < 1:3286354/148‑1 (MQ=255) gCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACtt < 1:3286394/148‑1 (MQ=255) gCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACtt < 2:860328/148‑1 (MQ=255) gCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACtt < 1:1800263/148‑1 (MQ=255) ccatcAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGc > 2:2460014/1‑148 (MQ=255) ccatcAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGc > 1:382896/1‑148 (MQ=255) catcAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCa < 1:2036590/148‑1 (MQ=255) catcAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCa < 1:3016214/148‑1 (MQ=255) atcAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCAt > 2:1458652/1‑148 (MQ=255) tcAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCAtt > 1:794232/1‑148 (MQ=255) cccTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGgcgc > 2:2696153/1‑148 (MQ=255) cccTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGgcgc > 1:468575/1‑148 (MQ=255) cTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGgcgcgc < 2:1220899/148‑1 (MQ=255) tAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCt > 2:317193/1‑148 (MQ=255) aaTGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCTCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTg > 1:1852297/1‑148 (MQ=255) aaTGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCTCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTg > 1:1852308/1‑148 (MQ=255) aaTGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTg > 2:797186/1‑148 (MQ=255) ggAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCTCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTACGCATTGGCGCGCTGCaa > 2:603658/1‑148 (MQ=255) ggAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCaa < 2:1427676/148‑1 (MQ=255) ggAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCaa < 2:1763631/148‑1 (MQ=255) gAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAAc > 1:2477906/1‑148 (MQ=255) aaGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAg < 1:1251639/148‑1 (MQ=255) aGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGt < 1:2944211/148‑1 (MQ=255) aGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGt > 1:2644223/1‑148 (MQ=255) gcgcCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGtt < 2:2264717/148‑1 (MQ=255) cGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACa > 2:2087755/1‑148 (MQ=255) gCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACaa < 1:282854/148‑1 (MQ=255) cTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACaaa > 1:511401/1‑148 (MQ=255) cTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACaaa > 1:917867/1‑148 (MQ=255) cTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACaaa > 1:1319459/1‑148 (MQ=255) cTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACaaa < 1:2711553/148‑1 (MQ=255) cTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTAc < 2:624445/148‑1 (MQ=255) cTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTAc > 1:131511/1‑148 (MQ=255) tATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTAcc < 1:1539389/148‑1 (MQ=255) tGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAg > 2:3302258/1‑148 (MQ=255) gAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAgg < 1:2900463/148‑1 (MQ=255) gTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCag < 1:2542918/148‑1 (MQ=255) tCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCagt < 1:2229330/148‑1 (MQ=255) cTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCagtg < 1:1686599/148‑1 (MQ=255) ggCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTgg < 1:1466800/148‑1 (MQ=255) cGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTggaa < 1:1027029/148‑3 (MQ=255) aTTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCAGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGa < 2:585939/148‑1 (MQ=255) ttCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGaa > 2:2711743/1‑148 (MQ=255) caacaaCTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAg < 2:1565222/148‑1 (MQ=255) caacTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCaa > 2:699690/1‑148 (MQ=255) aacTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAAt > 2:1251337/1‑148 (MQ=255) acTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACATCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAAtt > 2:1304169/1‑148 (MQ=255) ggggCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGAt < 2:1137791/148‑1 (MQ=255) ggggCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGAt < 2:1137781/148‑1 (MQ=255) ggggCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGAt > 2:295528/1‑148 (MQ=255) gggCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATg > 1:2228254/1‑148 (MQ=255) gggCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATg < 1:2788025/148‑1 (MQ=255) ggCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGt < 1:1497472/148‑1 (MQ=255) ggCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGt > 1:3133786/1‑148 (MQ=255) cGTGATTACATGGCCTCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTg < 2:1253546/148‑1 (MQ=255) cGTGATTACATGGCCTCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTg < 2:2900879/148‑1 (MQ=255) cGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTg > 1:672117/1‑148 (MQ=255) gTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGc < 1:2460824/148‑1 (MQ=255) aTTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGa < 1:1012039/148‑1 (MQ=255) aTTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGa < 1:2666377/148‑1 (MQ=255) ttACATGGCCTCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGaa > 1:96188/1‑148 (MQ=255) ttACATGGCCTCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGaa > 1:95545/1‑148 (MQ=255) ttACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGaa < 1:354918/148‑1 (MQ=255) tACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAAc > 2:2651490/1‑148 (MQ=255) tACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAAc > 2:2637408/1‑148 (MQ=255) tGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAACGCCt > 1:192229/1‑148 (MQ=255) tGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAACGCCt > 1:2346708/1‑148 (MQ=255) ggCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAACGCCTg < 2:3023287/148‑1 (MQ=255) ggCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAACGCCTg < 2:478434/148‑1 (MQ=255) gccgccGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAACGCCTgg > 1:3070689/1‑148 (MQ=255) gccgGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAACGCCTGGTGa < 2:1484275/148‑1 (MQ=255) | GCCCACCTTACGCTCGGAAACCTGTTCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAACGCCTGGTGA > CP009273/1335025‑1335319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |