| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,412,385 | G→T | 100% | N34K (AAC→AAA) | kilR ← | Rac prophage; inhibitor of ftsZ, killing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,412,385 | 0 | G | T | 93.8% | 671.7 / 31.5 | 237 | N34K (AAC→AAA) | kilR | Rac prophage; inhibitor of ftsZ, killing protein |
| Reads supporting (aligned to +/- strand): ref base G (6/9); new base T (98/122); total (104/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Polymorphic base substitution creates a homopolymer stretch. | |||||||||||
Only 100 of 239 total aligned reads displayed.
TAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTGTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACTTTGTTGATGCGGTGT > CP009273/1412240‑1412528 | tAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATtttt > 1:1411487/1‑148 (MQ=255) gCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGc > 2:286723/1‑148 (MQ=255) gCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGc < 2:2034972/148‑1 (MQ=255) acaTTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCg < 1:2861548/148‑1 (MQ=255) caTTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGa > 1:3161481/1‑148 (MQ=255) caTTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTGTTTGCCGa > 2:1113629/1‑148 (MQ=255) ttttattttCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAgg > 1:2898546/1‑148 (MQ=255) ttttattttCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAgg > 1:2781245/1‑148 (MQ=255) ttttattttCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAgg > 1:712725/1‑148 (MQ=255) tttattttCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGACGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGc > 1:2491987/1‑148 (MQ=255) tttattttCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGc > 1:313026/1‑148 (MQ=255) tttattttCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGc > 2:2123776/1‑148 (MQ=255) ttattttCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTGTTTGCCGAGGCa < 1:3226143/148‑1 (MQ=255) tattttCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCaa < 2:235753/148‑1 (MQ=255) attttCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAat > 2:1799604/1‑148 (MQ=255) attttCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAat > 1:661511/1‑148 (MQ=255) tttCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAatat < 1:228172/148‑1 (MQ=255) cTTAGTCATCACCATGACTCCGCCATTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATg < 2:2927201/148‑1 (MQ=255) ttAGTCATCACCATGACTCCGCCTTTACAGGTAAACAATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGt < 2:2558336/148‑1 (MQ=255) tAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTc > 1:2428444/1‑148 (MQ=255) aGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTcc < 1:1524842/148‑1 (MQ=255) gTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCg < 1:303519/148‑1 (MQ=255) catcaCCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGc < 1:2165952/148‑1 (MQ=255) atcaCCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGcc > 2:1713297/1‑148 (MQ=255) ccATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCa > 2:3299331/1‑148 (MQ=255) gACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATgaa < 1:211056/148‑1 (MQ=255) gACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATgaa > 2:657409/1‑148 (MQ=255) cTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATgaaga > 1:2388497/1‑148 (MQ=255) cTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATgaaga < 1:1834323/148‑1 (MQ=255) cGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACa < 2:2013637/148‑1 (MQ=255) ccTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATa < 2:1523805/148‑1 (MQ=255) ccTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATa < 2:1524325/148‑1 (MQ=255) tttACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAAt < 2:2424971/148‑1 (MQ=255) tttACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAAt < 1:1786191/148‑1 (MQ=255) ttACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGACGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATc > 2:1881167/1‑148 (MQ=255) tACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCg < 1:2212157/148‑1 (MQ=255) ggTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCAGGCCTTCATGAAGAACATAATCGCCAg > 2:1840852/1‑148 (MQ=255) aaaCCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAg > 2:2264338/1‑148 (MQ=255) aaCCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGt < 1:1907271/148‑1 (MQ=255) cATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTcac < 2:948355/148‑1 (MQ=255) cACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTcacaca > 1:1290028/1‑148 (MQ=255) aCGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATTTTTTTGTGGTCAGTTTACTAATATATAGTTTTCGATTTTTAATATTTTTTGACGAGGCAATATATGTCCGGCCTTCATGAAGAAAATAATCGCCAGGAGTCacacac < 1:562046/148‑1 (MQ=255) cGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACg > 1:19994/1‑148 (MQ=255) ggAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTgg > 2:3058445/1‑148 (MQ=255) ggAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTgg > 1:1195483/1‑148 (MQ=255) gAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGt > 1:2316725/1‑148 (MQ=255) aGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGTCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTAt < 2:2680665/148‑1 (MQ=255) aGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTAt < 1:755175/148‑1 (MQ=255) aGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTAt < 1:1612677/148‑1 (MQ=255) aGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTGTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTAt < 2:781502/148‑1 (MQ=255) aaTCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTtcatca < 2:1054282/148‑1 (MQ=255) aTCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAg > 1:588465/1‑148 (MQ=255) tCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGt > 2:2166978/1‑148 (MQ=255) tCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGt > 1:3019183/1‑148 (MQ=255) aTGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTc < 2:217838/148‑1 (MQ=255) tCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGt < 2:97785/148‑1 (MQ=255) tCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGt < 2:528087/148‑1 (MQ=255) tAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGAtg > 1:1299138/1‑148 (MQ=255) tAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGAtg > 1:1467526/1‑148 (MQ=255) aatgTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCaa < 2:263553/148‑1 (MQ=255) atgTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAAt < 2:41781/148‑1 (MQ=255) atgTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAAt < 2:1063050/148‑1 (MQ=255) atgTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAAt < 2:1469781/148‑1 (MQ=255) gTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCa < 2:3076552/148‑1 (MQ=255) tttttGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCAt > 1:1001266/1‑148 (MQ=255) tttttGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCAt > 1:2636215/1‑148 (MQ=255) tttttGGGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCAt < 2:2082396/148‑1 (MQ=255) tttGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCTAAGTGATGTGCAATCATaa < 2:411481/148‑1 (MQ=255) tttGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATaa < 1:105908/148‑1 (MQ=255) tCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTAtctc < 2:1164706/148‑1 (MQ=255) tCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTAtctc < 2:627836/148‑1 (MQ=255) ggTTACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTACAt > 2:3174134/1‑148 (MQ=255) ttACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGTAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCAttt > 1:769220/1‑148 (MQ=255) ttACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCAttt < 1:98420/148‑1 (MQ=255) ttACGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCAttt > 1:769361/1‑148 (MQ=255) aCGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCAttttt < 2:1282582/148‑1 (MQ=255) aCGAATATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCAttttt < 1:2463366/148‑1 (MQ=255) aaTATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACa > 2:2108763/1‑148 (MQ=255) aaTATATAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACa > 2:726259/1‑148 (MQ=255) atatatAGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACaa < 2:100557/148‑1 (MQ=255) atataGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCAtt > 1:1088772/1‑139 (MQ=255) atataGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAAt < 1:261357/148‑1 (MQ=255) atataGTTTTCGCTTTTTAATATT‑TTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATg < 1:1268750/148‑1 (MQ=255) tataGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATg > 2:474952/1‑148 (MQ=255) ataGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGa < 1:1169815/148‑1 (MQ=255) ataGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGa < 1:2584474/148‑1 (MQ=255) taGTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGaa < 2:712725/148‑1 (MQ=255) gTTTTCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACt < 2:3019183/148‑1 (MQ=255) ttttCTTTTTTTAATATTTTTTTCCGAGGCAATTTATGTGCGGACTTCATTATTTAAATAATCGCCATGAGTCACACACTGACGTGGTATTTCATCAGTTCCGATGTGTTGTGCAATCATAATTATCTCCATTTTTACATATGAACtt < 1:3057434/148‑1 (MQ=255) ttttCGATTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACtt < 1:2551913/148‑1 (MQ=255) tttCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACttt > 2:2944171/1‑148 (MQ=255) tttCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACttt > 2:932962/1‑148 (MQ=255) ttCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACTttg < 1:1881167/148‑1 (MQ=255) tCGCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACTttgt > 2:2779234/1‑148 (MQ=255) gCTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACTttgttg < 2:661512/148‑1 (MQ=255) cTTTTTAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACTTTGTTGa > 2:866253/1‑148 (MQ=255) ttttAATATTTTTTGCCGAGGCTATATATGTCCGGCATTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACTTTGTTGATg < 1:2123776/148‑1 (MQ=255) tttAATATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACTTTGTTGATGc > 2:3134359/1‑148 (MQ=255) aaTATTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACTTTGTTGATGCGgt > 2:1646118/1‑148 (MQ=255) tatTTTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACTTTGTTGATGCGgtgt > 2:3078248/1‑148 (MQ=255) | TAAGCACATTTTATTTTCTTAGTCATCACCATGACTCCGCCTTTACAGGTAAACCATCACGACCGAGGAAGACTTTAATCATGCGGTCAGTAATGAATGTTTTTGTGGTCAGGTTACGAATATATAGTTTTCGCTTTTTAATATTGTTTGCCGAGGCAATATATGTCCGGCCTTCATGAAGAACATAATCGCCAGGAGTCACACACTGACGTGGTATTTCATCAGTTCCGAAGTGATGTGCAATCATAATTATCTCCATTTTTACAAATGAACTTTGTTGATGCGGTGT > CP009273/1412240‑1412528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |