| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,506,046 | G→T | 8.9% | E46* (GAA→TAA) | ydcS → | polyhydroxybutyrate (PHB) synthase, ABC transporter periplasmic binding protein homolog |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,506,046 | 0 | G | T | 8.9% | 525.6 / 15.1 | 175 | E46* (GAA→TAA) | ydcS | polyhydroxybutyrate (PHB) synthase, ABC transporter periplasmic binding protein homolog |
| Reads supporting (aligned to +/- strand): ref base G (76/78); new base T (6/13); total (82/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 175 total aligned reads displayed.
AGTAAGACCTTATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTGGTTACGGCATC > CP009273/1505900‑1506191 | gTAAGACCTTATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGaa < 2:2564354/148‑1 (MQ=255) tAAGACCTTATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAAc > 1:2695063/1‑148 (MQ=255) aGACCTTATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAAcgc > 1:1012232/1‑148 (MQ=255) gACCTTATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCTAAcgcg > 1:2008581/1‑148 (MQ=255) gACCTTATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAAcgcg < 1:709045/148‑1 (MQ=255) ccTTATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGa > 1:106834/1‑148 (MQ=255) tATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACaa > 2:1947397/1‑148 (MQ=255) tATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACaa > 2:2685954/1‑148 (MQ=255) tGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAAc > 2:262231/1‑148 (MQ=255) aGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTg > 2:1672429/1‑148 (MQ=255) gCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGGTATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGa > 2:1290684/1‑148 (MQ=255) gCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGa < 1:1315759/148‑1 (MQ=255) gACATTTGCCCGCAGCATCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATaaa < 2:2477534/148‑1 (MQ=255) gACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATaaa > 2:221777/1‑148 (MQ=255) gACAATTGCCCGCAGCAGCCAGTGTGCGCTCAGCATGACAAAAATGACCGCTCACGCCGCCGAACCGCCTACCAAATTAGATAAACCGGAAGGCCGACTGCAAATAATCGCCTCGCCGGGAAACATCGAACGCGGACAAAcacaaaaa > 2:1255045/1‑141 (MQ=255) cATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCTAACGCGGACAAACTGATAAACa < 2:2405068/148‑1 (MQ=255) cATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACa < 1:1673678/148‑1 (MQ=255) tttGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAAt > 1:817990/1‑148 (MQ=255) ttGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATa < 1:1870975/148‑1 (MQ=255) ttGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATa < 2:313720/148‑1 (MQ=255) ttGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATa < 1:204060/148‑1 (MQ=255) agcCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTaa < 2:2730751/148‑1 (MQ=255) cTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGATGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGc < 1:233816/148‑1 (MQ=255) gtgtgCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAg > 1:1600518/1‑148 (MQ=255) gtgCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGTATATTATCGCCTGGCCGGTATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGtt < 1:2814343/148‑1 (MQ=255) tgCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCTAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTc > 1:3088984/1‑148 (MQ=255) tgCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTc > 1:2726059/1‑148 (MQ=255) cTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGaaa < 2:2356678/148‑1 (MQ=255) tCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATACACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGaaaa < 1:2030591/148‑1 (MQ=255) cAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGaaaaa < 2:2744655/148‑1 (MQ=255) aGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAag < 1:3024465/148‑1 (MQ=255) gCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCACTTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAaga < 2:2564882/148‑1 (MQ=255) gCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAaga > 2:1896993/1‑148 (MQ=255) cATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACTTCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAagag < 2:2749114/148‑1 (MQ=255) cATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAagag < 2:381101/148‑1 (MQ=255) aTGACATTAATGACCGCTCTGGCCGCCGAACCGCTTACCATTTTAGATAAACGGGTAGGGGGACTGTATATTTTCGCGTGGCGGGTTTACTTCTAACGCGGAAAAACTTATAAACAATACGACTGGGTAACGCAGTTCGAAAAAgaga < 2:1142902/148‑1 (MQ=255) aTGACAATAATGACCCCTCACGCCGCCGAACCGCATACAAATTTAGATAAACGGGACGGGCGACTGTATATTATCGCCGGGCGGGTATACATCGAACGCGGACAAACTCATAAACAATACGACTGGGTAACGCAGTTCGAAAAAgaga < 1:857655/148‑1 (MQ=255) tGACAATAATGACCGCTCACGCCGCCGAACCGCATACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATAAATCGAACGCGCAAAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGAc < 1:2001723/148‑1 (MQ=255) gACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACa > 2:3291660/1‑148 (MQ=255) gACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACa < 1:1630185/148‑1 (MQ=255) cAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGTACAAACTTATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAgg < 2:3089521/148‑1 (MQ=255) aataatGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAACAAGAGACAGGc > 1:2465112/1‑148 (MQ=255) ataatGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCt > 2:691994/1‑148 (MQ=255) ataatGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCt > 2:506295/1‑148 (MQ=255) aatGACCGCTCACGCCGCCGAACCGCCTGCCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTgc > 1:2803936/1‑148 (MQ=255) atGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTgcg < 1:1786242/148‑1 (MQ=255) ccGCTCACGCCGCCGAACCGCCTACCAATGTAGATAAACCGGAAGGGCGACTGGAAATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGt > 2:3199595/1‑148 (MQ=255) cACGCCGCCTAACCGCCTACAAATTTATATAAACCGGATAGGCGACTGTATATTATCGCCTGGCCGGTATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAAtg < 1:618859/148‑1 (MQ=255) gcctAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGaaaa < 1:1215277/148‑1 (MQ=255) gAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAAccg < 2:1483264/148‑1 (MQ=255) aaCCGCCTACCAATTTAGATAAACCGGATGGGCGACTGTATTTTATCGCCGGGCGGGGATACATCTAACGCGGAAAAACTTATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAAccgc < 1:926842/148‑1 (MQ=255) aaCCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAAccgc > 1:3113983/1‑148 (MQ=255) aCCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAAccgcc > 2:92598/1‑148 (MQ=255) cGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACcgccgc > 1:3203890/1‑148 (MQ=255) ccTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCTAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGa > 1:3287847/1‑148 (MQ=255) ccAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTc < 2:2085214/148‑1 (MQ=255) caattttAGATAAACCGGATGGGCGACTGTATATTATCGCGTGGCGGTTATACATCTAACGCGTAAAAACTTATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTc < 1:2916035/144‑1 (MQ=255) cAATTTAGATAACCCGGACGGGCGACTGGATATTATCGCGTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTcc < 1:3247047/148‑1 (MQ=255) cAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTcc > 1:2424799/1‑148 (MQ=255) aaTTTAGATAAACCGGACGGGCGACTGGATATTATCGCCGGGCCGGTATACATCTAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCg < 1:1090695/148‑1 (MQ=255) aGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGaa < 1:1947397/148‑1 (MQ=255) aTAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCTAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAAt > 1:228707/1‑148 (MQ=255) aaaCCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATgg > 1:3312988/1‑148 (MQ=255) aaaCCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATgg > 1:3313136/1‑148 (MQ=255) aCCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTc > 1:841549/1‑148 (MQ=255) ccGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCa > 2:740346/1‑148 (MQ=255) gtaaGGGCGACTGTATATTATCGCCTGGCCGTGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGt < 2:2395330/146‑1 (MQ=255) ggAAGGGCGACTGGATATTATCGCCTGGCCGGTATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGt < 2:681929/148‑1 (MQ=255) ggAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCAAACGCGGACAAACTGATAAAAAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGt < 2:847991/148‑1 (MQ=255) gAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTc > 2:1574366/1‑148 (MQ=255) gAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTc < 2:2953922/148‑1 (MQ=255) gAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTc > 1:1273540/1‑148 (MQ=255) gAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTCCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTc > 2:1098497/1‑148 (MQ=255) aaGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCt > 2:2893725/1‑148 (MQ=255) aaGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCt > 1:446556/1‑148 (MQ=255) gCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCtgatg < 2:1505385/148‑1 (MQ=255) aCTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGAcc > 2:1642112/1‑148 (MQ=255) tGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCaa > 1:972884/1‑148 (MQ=255) tGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCaa > 1:2625993/1‑148 (MQ=255) ggATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCaaa > 2:545218/1‑148 (MQ=255) atatTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAgg > 2:1967244/1‑148 (MQ=255) atatTATCGCCTGGCCGGCATACATCGAACGCGCAAAAACTTATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAgg < 1:1560385/148‑1 (MQ=255) ttatCGCCTGGCCGGTAAACATATAACGCGCACAAACTTAAAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAggggg < 1:667786/148‑1 (MQ=255) ttatCGCCGGGCCGGTATACATCGACCGCGCACAAACTTATAAACAATCCGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAggggg < 1:2291408/148‑1 (MQ=255) tatCGCCTGGCCGGTATAAATCTAACGGTGACAAACTGTTAAACAATACGACGTGGTAACGCTGTTCGAAAAAGAGACAGGATGCGCGGTGATTGTTAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGt < 1:1603935/148‑1 (MQ=255) atCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGtt < 2:1600518/148‑1 (MQ=255) accGCCGGGCCGGGACACATCGACCCCGCACAAACTGATAAACCACACGACTGGGTAACGCAGTTCGAAAAAGAGACCGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGtt < 1:2125939/146‑1 (MQ=255) gCCTGGCCGGGATACATCGAACGCGGACAAACTCAAAAACAATCCGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACg < 1:1014129/148‑1 (MQ=255) cTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGAt < 1:1669291/148‑1 (MQ=255) cTGGCCGGGATAAATCGAACGCGTACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGAt < 1:1669393/148‑1 (MQ=255) ggCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCt > 2:965320/1‑148 (MQ=255) gCCGGGATACATCTAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTg < 2:1182808/148‑1 (MQ=255) gCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTg > 1:2047239/1‑148 (MQ=255) gCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTg > 1:1588240/1‑148 (MQ=255) ccGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTgg < 2:751499/148‑1 (MQ=255) cGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTGGt < 2:205164/148‑1 (MQ=255) cGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTGGt < 2:1569506/148‑1 (MQ=255) cGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTGGt < 2:818079/148‑1 (MQ=255) aCATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTGGTTACGGc > 2:1265498/1‑148 (MQ=255) cATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTGGTTACGGCa > 2:1758622/1‑148 (MQ=255) | AGTAAGACCTTATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTGGTTACGGCATC > CP009273/1505900‑1506191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |