| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,569,502 | T→G | 88.2% | intergenic (‑43/+2) | pqqL ← / ← yddB | putative periplasmic M16 family zinc metalloendopeptidase/putative TonB‑dependent outer membrane receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,569,502 | 0 | T | G | 88.2% | 767.2 / 49.0 | 231 | intergenic (‑43/+2) | pqqL/yddB | putative periplasmic M16 family zinc metalloendopeptidase/putative TonB‑dependent outer membrane receptor |
| Reads supporting (aligned to +/- strand): ref base T (16/12); new base G (101/102); total (117/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 233 total aligned reads displayed.
TAACTTTTCATCCTGCGGTAAGGCGGCGGCAATCAGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACTATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTTTGTTGTTGCAGAAATT > CP009273/1569355‑1569649 | ttttCATCCTGCGGTAAGGCGGCGGCAATCAGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTa > 1:3306108/1‑148 (MQ=255) ttttCATCCTGCGGTAAGGCGGCGGCAATCAGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTa > 1:2384484/1‑148 (MQ=255) ttCATCCTGCGGTAAGGCGGCGGCAATCAGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTaaa < 1:3180618/148‑1 (MQ=255) tCCTGCGGTAAGGCGGCGGCAATCAGCCGCCCGGGGATCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACTATTAAAAttt < 1:965689/148‑1 (MQ=255) tGCGGTAAGGCGGCGGCAATCAGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCAt > 2:56736/1‑148 (MQ=255) tAAGGCGGCGGCAATCAGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGACCGATTAAAATTTCATGCTGa > 2:1708120/1‑148 (MQ=255) ggcggcggcAATCAGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACAt > 2:2449270/1‑148 (MQ=255) ggcAATCAGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGAGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGcc < 2:1455539/148‑1 (MQ=255) cAATCAGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAg > 2:857048/1‑148 (MQ=255) cAATCAGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAg > 2:3073049/1‑148 (MQ=255) aGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGt < 1:1561834/148‑1 (MQ=255) aGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGt < 1:3206144/148‑1 (MQ=255) aGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGt < 2:2561336/148‑1 (MQ=255) aGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGt < 2:3168438/148‑1 (MQ=255) gccCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACgg < 1:1350741/148‑1 (MQ=255) gccCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACgg < 1:2998445/148‑1 (MQ=255) cccGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGc > 1:1103717/1‑148 (MQ=255) cGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCa < 2:1095552/148‑1 (MQ=255) ggggAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCAc < 2:55873/148‑1 (MQ=255) ggggAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCAc < 2:211467/148‑1 (MQ=255) gCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCg > 2:2601943/1‑148 (MQ=255) cAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGt > 2:2254380/1‑148 (MQ=255) cAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGt > 1:3111683/1‑148 (MQ=255) aCAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAg < 1:56787/148‑1 (MQ=255) aCAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAg < 1:1988683/148‑1 (MQ=255) cAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAgg > 2:1097547/1‑148 (MQ=255) agTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCAGGTTAAGTAAAATCCGAACGATTAAAATTACATGCTGACAACAATCCAGAAAGTACGGCCACTGGCGTAGGTCg > 1:2885327/1‑148 (MQ=255) tAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCgg < 1:1422996/148‑1 (MQ=255) tAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCgg > 1:365547/1‑148 (MQ=255) aCGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGgtg < 2:3262569/148‑1 (MQ=255) aCGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGgtg > 1:393893/1‑148 (MQ=255) cGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGgtgt < 1:2550552/148‑1 (MQ=255) cAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCg < 2:2685414/148‑1 (MQ=255) cAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCg < 1:2151261/148‑1 (MQ=255) aGTAAGAAACAGAGGTTTCTCATAATTCTCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGt < 2:603426/148‑1 (MQ=255) gTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGtt < 1:2371757/148‑1 (MQ=255) tAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTg > 2:907013/1‑148 (MQ=255) aGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACTATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTa < 1:2753291/148‑1 (MQ=255) gAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGTGTAGGTCGCCACACCGGTGTTCGTTGTAt > 1:2609896/1‑148 (MQ=255) gAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTAt > 2:2196535/1‑148 (MQ=255) gAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTAt > 1:556816/1‑148 (MQ=255) aCAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCaa > 1:3277449/1‑148 (MQ=255) aCAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCaa < 2:1300511/148‑1 (MQ=255) cAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAAc < 1:1608063/148‑1 (MQ=255) agagGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACa < 1:612368/148‑1 (MQ=255) agGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGc < 2:3305396/148‑1 (MQ=255) agGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGc > 1:2083915/1‑148 (MQ=255) agGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGc > 2:633013/1‑148 (MQ=255) gTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCgg > 1:1509743/1‑148 (MQ=255) ttCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGtt < 2:1027660/148‑1 (MQ=255) ttCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGtt < 2:1170903/148‑1 (MQ=255) tctcATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGttt < 1:104604/148‑1 (MQ=255) ctcATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGtttt > 2:1397600/1‑148 (MQ=255) cATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGc > 2:872035/1‑148 (MQ=255) aaTTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTAt > 2:1230759/1‑148 (MQ=255) aaTTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTAt > 1:3168617/1‑148 (MQ=255) aaTTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTAt > 2:742843/1‑148 (MQ=255) cttATCGCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCACGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATc < 2:1791186/147‑1 (MQ=255) aTTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATc > 2:2664260/1‑148 (MQ=255) aTTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATc < 2:99162/148‑1 (MQ=255) ttATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATcc < 1:2272545/148‑1 (MQ=255) aTCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAg < 1:1931651/148‑1 (MQ=255) tctcCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGt > 2:3189561/1‑148 (MQ=255) tctcCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGt > 1:872706/1‑148 (MQ=255) ccATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACa > 2:1906887/1‑148 (MQ=255) tGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACTATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTg > 2:2292508/1‑148 (MQ=255) gCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTga > 1:2199802/1‑148 (MQ=255) gAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTgaga < 1:2313938/148‑1 (MQ=255) aaaaCCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGaa < 2:2136376/148‑1 (MQ=255) aaaCCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACTATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAat < 2:2739359/148‑1 (MQ=255) aaaCCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACTATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAat < 2:772494/148‑1 (MQ=255) aaaCCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCTCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAat > 2:2909441/1‑148 (MQ=255) aaaCCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAat > 2:1259668/1‑148 (MQ=255) aCCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAatat < 2:1516419/148‑1 (MQ=255) aCCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAatat < 2:3306108/148‑1 (MQ=255) ccGGGCGAATTTACCCGGTTAAGTAAAATCCGAACTATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATc > 2:2065778/1‑148 (MQ=255) gCGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCa < 1:2529995/148‑1 (MQ=255) cGAATTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCAc > 2:2014599/1‑148 (MQ=255) aTTTACCCGGTTAAGTAAAATCCGAACTATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGa < 2:2794009/148‑1 (MQ=255) aTTTACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGa > 1:503498/1‑148 (MQ=255) tACCCGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCg < 2:433557/148‑1 (MQ=255) cccGGATAAGTAAAATCCGAACGATTAAACTTTCATGCTGACATCACGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTc < 1:1708120/148‑1 (MQ=255) ccGGTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCACGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCa < 2:2358958/148‑1 (MQ=255) ggTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAgg < 2:2224133/148‑1 (MQ=255) gTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGt > 1:400777/1‑148 (MQ=255) gTTAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGt < 1:2566743/148‑1 (MQ=255) ttAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGtt < 1:127305/148‑1 (MQ=255) ttAAGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGtt > 2:2218675/1‑148 (MQ=255) aGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTttg < 1:1097507/148‑1 (MQ=255) aGTAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTttg < 2:2397020/148‑1 (MQ=255) tAAAATCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTttgtt < 2:2318630/148‑1 (MQ=255) aaaaTCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTttgttg > 2:589776/1‑148 (MQ=255) aaaaTCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTttgttg > 2:2025598/1‑148 (MQ=255) aaaTCCGAACTATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTttgttgt > 1:493894/1‑148 (MQ=255) aaaTCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTttgttgt < 1:117960/148‑1 (MQ=255) aaTCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACAGTGAGAATATCGGCACTGATCGTCAGGTTttgttgtt > 1:1704942/1‑148 (MQ=255) tCCGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTTTGTTGTTGc > 1:571288/1‑148 (MQ=255) ccGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTTTGTTGTTGCa > 1:1770678/1‑148 (MQ=255) cGAACGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTTTGTTGTTGCAg < 1:3073044/148‑1 (MQ=255) aaCGATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTTTGTTGTTGCAGaa > 1:2486551/1‑148 (MQ=255) | TAACTTTTCATCCTGCGGTAAGGCGGCGGCAATCAGCCGCCCGGGGAGCAACAGAGTTGCCACTAACGTCAGTAAGAAACAGAGGTTTCTCATAATTATCTCCATGCGAAAACCGGGCGAATTTACCCGGTTAAGTAAAATCCGAACTATTAAAATTTCATGCTGACATCAAGCCAGAAAGTACGGCCACTGGCGTAGGTCGCCACACCGGTGTTCGTTGTATCAACAGCGGTTTTGCTATCCAGTACATTGAGAATATCGGCACTGATCGTCAGGTTTTGTTGTTGCAGAAATT > CP009273/1569355‑1569649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |