| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 153,766 | C→A | 5.9% | A152S (GCA→TCA) | folK ← | 2‑amino‑4‑hydroxy‑6‑hydroxymethyldihyropteridine pyrophosphokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 153,766 | 0 | C | A | 5.9% | 842.9 / 18.1 | 227 | A152S (GCA→TCA) | folK | 2‑amino‑4‑hydroxy‑6‑hydroxymethyldihyropteridine pyrophosphokinase |
| Reads supporting (aligned to +/- strand): ref base C (123/90); new base A (10/4); total (133/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 234 total aligned reads displayed.
GATATTTATTTATAGGAAGTTATATTATTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCACTTCATTAC > CP009273/153620‑153912 | gATATTTATTTATAGGAAGTTATATTATTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGct > 1:2872649/1‑148 (MQ=255) atatTTATTTATAGGAAGTTATATTATTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGctc > 1:795568/1‑148 (MQ=255) atatTTATTTATAGGAAGTTATATTATTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGctc > 2:3197913/1‑148 (MQ=255) atatTTATTTATAGGAAGTTATATTATTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGctc > 1:1231293/1‑148 (MQ=255) atttatttATAGGAAGTTATATTATTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCtt < 1:1819543/148‑1 (MQ=255) tatttatAGGAAGTTATATTATTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTtgta < 1:1521228/148‑1 (MQ=255) taGGAAGTTATATTATTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAg > 2:930819/1‑148 (MQ=255) aaGTTATATTATTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGAttt < 2:1341106/148‑1 (MQ=255) ttATATTATTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGAc > 1:82930/1‑148 (MQ=255) tataTTATTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACg > 2:661143/1‑148 (MQ=255) tattatTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCa > 1:2951649/1‑148 (MQ=255) attTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACAt < 1:933798/148‑1 (MQ=255) attTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACAt < 1:3010333/148‑1 (MQ=255) ttCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACAtct > 2:1022292/1‑148 (MQ=255) gagaTGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAg > 2:2880992/1‑148 (MQ=255) gagaTGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAg > 1:1972394/1‑148 (MQ=255) aTGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGaa < 2:1726217/148‑1 (MQ=255) tttAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAaca > 2:261733/1‑148 (MQ=255) tttAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAaca < 1:986876/148‑1 (MQ=255) aCTAAAATCGTACTTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTGTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGACACACCAAc > 2:3296024/1‑148 (MQ=255) tAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGATCTTGTATGTAAGATTTGAAGCAACATCTCCCCATCAGGAAACACCAACTc > 1:1832321/1‑148 (MQ=255) aaaaTCGTAATTAAGGAAAGAGATGAAATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTcc > 1:2835363/1‑148 (MQ=255) aaTCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCgg > 1:2831404/1‑148 (MQ=255) gTAATTAATGAAAGAGATGATATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGcgcg < 2:2096094/148‑1 (MQ=255) tAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGa < 1:2564026/148‑1 (MQ=255) tAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGa > 1:1701098/1‑148 (MQ=255) aTTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGAtt < 1:267127/148‑1 (MQ=255) aTTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGAtt < 1:1255083/148‑1 (MQ=255) ttAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGAttt < 2:1892271/148‑1 (MQ=255) tAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTc > 1:2411602/1‑148 (MQ=255) aGGAAAGAGATGAGATATGATTTACAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCaa < 1:2184760/148‑1 (MQ=255) gAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAAc > 2:816185/1‑148 (MQ=255) gAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGATCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAAc > 1:483354/1‑148 (MQ=255) aaaGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGATCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACa > 2:2144906/1‑148 (MQ=255) aaGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAg < 1:2796454/148‑1 (MQ=255) aaGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAg > 2:748911/1‑148 (MQ=255) agagATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGc > 2:1851893/1‑148 (MQ=255) atGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCAt > 1:2594080/1‑148 (MQ=255) tttCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATc > 2:1936974/1‑148 (MQ=255) tttCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATc > 1:417898/1‑148 (MQ=255) ttCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATcc > 2:1556649/1‑148 (MQ=255) aGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACg < 2:1508111/148‑1 (MQ=255) aaaaTATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGAt > 1:160344/1‑148 (MQ=255) aaaTATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGAtt < 1:2014365/148‑1 (MQ=255) aaTATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGAttc < 2:3097812/148‑1 (MQ=255) tatTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGAttctt > 2:2822944/1‑148 (MQ=255) tatTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGAttctt < 1:1022292/148‑1 (MQ=255) tttATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCa < 2:1597158/148‑1 (MQ=255) tataTTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCata < 2:1274993/148‑1 (MQ=255) atTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCg > 1:2747365/1‑148 (MQ=255) ttCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGt > 2:462845/1‑148 (MQ=255) ttCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGt > 2:789648/1‑148 (MQ=255) ttCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGt > 2:1457512/1‑148 (MQ=255) ttCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGt > 2:789796/1‑148 (MQ=255) ttCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGGATGTAAGATTTGACTCAACATCTCCCCATCATGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGt > 1:2855067/1‑148 (MQ=255) ttCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGATCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGTGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGt < 1:1069550/148‑1 (MQ=255) tCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGATCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTa > 2:896934/1‑148 (MQ=255) cGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAg < 2:2635238/148‑1 (MQ=255) atatAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCg > 2:1404183/1‑148 (MQ=255) atatAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCg > 2:1071493/1‑148 (MQ=255) atatAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCg < 2:1231293/148‑1 (MQ=255) ataaataaATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGa > 2:2567218/1‑148 (MQ=255) aaataaatTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGacc > 1:1325396/1‑146 (MQ=255) aaataaatTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGACCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAAc > 1:2153501/1‑148 (MQ=255) aaataaatTACCATTTGTTTAATTTGTCAAATGATCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAAc > 2:1703322/1‑148 (MQ=255) aaataaatTACCATCTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAAc > 2:2848929/1‑148 (MQ=255) aataaatTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATAGTAGTGCGGAACg > 1:1194168/1‑148 (MQ=255) ataaatTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTCGTGCGGAACgg > 2:1694226/1‑148 (MQ=255) ataaatTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACgg < 1:2058044/148‑1 (MQ=255) taaatTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGt < 2:2434058/148‑1 (MQ=255) atTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAg > 1:225547/1‑148 (MQ=255) atTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAg > 1:1896212/1‑148 (MQ=255) atTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAg > 2:636506/1‑148 (MQ=255) atTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAg > 2:3300333/1‑148 (MQ=255) ttACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAgg > 1:3237719/1‑148 (MQ=255) ttACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAgg > 1:2569619/1‑148 (MQ=255) aCCATTTTTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCg < 1:3050835/148‑1 (MQ=255) aCCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCg > 2:534871/1‑148 (MQ=255) aCCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCg > 2:2253628/1‑148 (MQ=255) aCCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCg > 1:1102172/1‑148 (MQ=255) aTTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTc < 1:1760874/148‑1 (MQ=255) aTTTGTTTAATTTGTCAAATGATCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTc > 1:1356540/1‑148 (MQ=255) tttGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCa < 1:636506/148‑1 (MQ=255) tttGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCa > 2:2959245/1‑148 (MQ=255) tttGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCa > 2:2957415/1‑148 (MQ=255) aTTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTAt < 1:2763492/148‑1 (MQ=255) tttGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATc < 2:2266483/148‑1 (MQ=255) ttGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCa > 2:229170/1‑148 (MQ=255) ttGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCa < 1:2802291/148‑1 (MQ=255) ttGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCa > 1:2117844/1‑148 (MQ=255) tGTAAAATGATATTGTATGTAATATTTGACGCAACATCTCCCCATCAGTAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCAc < 1:5607/148‑1 (MQ=255) tCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCACtt < 2:2079259/148‑1 (MQ=255) tCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCACtt > 1:2485867/1‑148 (MQ=255) cAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCACTTc < 2:2009716/148‑1 (MQ=255) aaaTGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCACTTCa < 2:2645654/148‑1 (MQ=255) aaaTGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCACTTCa < 1:462845/148‑1 (MQ=255) aTGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCACTTCAtt < 2:517761/148‑1 (MQ=255) aTGCTCTTGTATGTAAGAATTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGCAACGGTCAGGCGTTCAGTATTTATCACTACAtt > 2:1207141/1‑148 (MQ=255) tGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCACTTCATTa < 1:3189286/148‑1 (MQ=255) gCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCACTTCATTAc > 1:341745/1‑148 (MQ=255) | GATATTTATTTATAGGAAGTTATATTATTTCCGCAAAGAGATGTTTAAACTAAAATCGTAATTAAGGAAAGAGATGAGATATGATTTTCAGAAAATATTTATATTCGCAATATAAATAAATTACCATTTGTTTAATTTGTCAAATGCTCTTGTATGTAAGATTTGACGCAACATCTCCCCATCAGGAAACACCAACTCCGGCGCGATTTCAAACAGCGGCCACAGCATAAATCCACGATTCTTCATATCGTAGTGCGGAACGGTCAGGCGTTCAGTATTTATCACTTCATTAC > CP009273/153620‑153912 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |