Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,117,566 T→A 7.2% T146S (ACC→TCC)  cpsB ← mannose‑1‑phosphate guanyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,117,5660TA 7.2% 556.3 / 27.1 180T146S (ACC→TCC) cpsBmannose‑1‑phosphate guanyltransferase
Reads supporting (aligned to +/- strand):  ref base T (99/68);  new base A (11/2);  total (110/70)
Fisher's exact test for biased strand distribution p-value = 8.28e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01

Only 100 of 185 total aligned reads displayed.

CCACATAGGCCTGAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTGCCGCCAGCGCCGCCAG  >  CP009273/2117419‑2117713
                                                                                                                                                   |                                                                                                                                                   
ccACATAGGCCTGAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGt                                                                                                                                                     >  1:1282090/1‑148 (MQ=255)
  acaTAGGCCTGAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCa                                                                                                                                                   <  1:3082021/148‑1 (MQ=255)
   caTAGGCCTGAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCAc                                                                                                                                                  >  2:114123/1‑148 (MQ=255)
     tAGGCCTGAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCa                                                                                                                                                >  2:1478192/1‑148 (MQ=255)
      aGGCCTGAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAg                                                                                                                                               >  1:3110103/1‑148 (MQ=255)
       ggCCTGAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGc                                                                                                                                              <  1:2059078/148‑1 (MQ=255)
       ggCCTGAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGc                                                                                                                                              <  1:2059009/148‑1 (MQ=255)
       ggCCTGAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGc                                                                                                                                              <  2:522102/148‑1 (MQ=255)
        gCCTGAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCt                                                                                                                                             <  1:2541945/148‑1 (MQ=255)
           tGAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGc                                                                                                                                          >  2:1095267/1‑148 (MQ=255)
            gAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGcc                                                                                                                                         >  2:2416692/1‑148 (MQ=255)
             aGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGccc                                                                                                                                        >  2:1009189/1‑148 (MQ=255)
                ggTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGTCGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCt                                                                                                                                     <  2:1926274/148‑1 (MQ=255)
                     ccAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGc                                                                                                                                >  1:1017992/1‑148 (MQ=255)
                           tCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATatgg                                                                                                                          <  1:2336439/148‑1 (MQ=255)
                           tCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATatgg                                                                                                                          >  1:1225828/1‑148 (MQ=255)
                             ggTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATatggca                                                                                                                        <  1:3130664/148‑1 (MQ=255)
                                ttttCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATatggcatgg                                                                                                                     >  1:1524149/1‑148 (MQ=255)
                                   tCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATggcatggcat                                                                                                                  <  1:1360749/148‑1 (MQ=255)
                                   tCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATggcatggcat                                                                                                                  <  1:3008082/148‑1 (MQ=255)
                                    cGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGACACCAGCTTGCCCGCTTCGGCATATGGAATGGCAtt                                                                                                                 <  2:2707449/148‑1 (MQ=255)
                                     gACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTa                                                                                                                <  1:1904348/148‑1 (MQ=255)
                                      aCAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTAc                                                                                                               >  1:966840/1‑148 (MQ=255)
                                      aCAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTAc                                                                                                               >  1:967106/1‑148 (MQ=255)
                                        aaaCTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGc                                                                                                             >  1:211219/1‑148 (MQ=255)
                                        aaaCTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGc                                                                                                             <  1:3274604/148‑1 (MQ=255)
                                          aCTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCAc                                                                                                           >  1:56861/1‑148 (MQ=255)
                                          aCTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCAc                                                                                                           >  1:2661305/1‑148 (MQ=255)
                                            tGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCAcgg                                                                                                         <  2:1827386/148‑1 (MQ=255)
                                                     tCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGa                                                                                                >  1:630756/1‑148 (MQ=255)
                                                     tCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGa                                                                                                <  1:108105/148‑1 (MQ=255)
                                                     tCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGa                                                                                                <  1:1781655/148‑1 (MQ=255)
                                                         aGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAAcgc                                                                                            >  1:2748918/1‑148 (MQ=255)
                                                         aGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAAcgc                                                                                            >  1:1127150/1‑148 (MQ=255)
                                                          ggCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAAcgcg                                                                                           <  1:1318708/148‑1 (MQ=255)
                                                           gCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGt                                                                                          >  1:2774957/1‑148 (MQ=255)
                                                           gCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGt                                                                                          >  1:1824377/1‑148 (MQ=255)
                                                             caccaTATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCt                                                                                        <  1:1378411/148‑1 (MQ=255)
                                                              accaTATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCtt                                                                                       >  2:3018448/1‑148 (MQ=255)
                                                                caTATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCa                                                                                     <  1:735929/148‑1 (MQ=255)
                                                                caTATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCa                                                                                     >  2:238512/1‑148 (MQ=255)
                                                                      cTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCa                                                                               <  2:2933148/148‑1 (MQ=255)
                                                                       tGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCaa                                                                              <  1:261063/148‑1 (MQ=255)
                                                                       tGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCaa                                                                              <  2:1935363/148‑1 (MQ=255)
                                                                          tCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATca                                                                           >  1:1382866/1‑148 (MQ=255)
                                                                           cACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATcac                                                                          <  2:2896513/148‑1 (MQ=255)
                                                                             cccGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACAt                                                                        >  1:2813459/1‑148 (MQ=255)
                                                                               cGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGa                                                                      >  2:1952421/1‑148 (MQ=255)
                                                                                gCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCGGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGAt                                                                     <  2:202837/148‑1 (MQ=255)
                                                                                gCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGAt                                                                     <  2:201474/148‑1 (MQ=255)
                                                                                   gACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATccg                                                                  >  2:997659/1‑148 (MQ=255)
                                                                                   gACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCAGCGGCAATCACATGATccg                                                                  >  2:2651116/1‑148 (MQ=255)
                                                                                    acacTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATccgc                                                                 >  1:2309892/1‑148 (MQ=255)
                                                                                       cTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCcgccgc                                                              >  2:328956/1‑148 (MQ=255)
                                                                                        ttCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCgccgcc                                                             >  1:1484944/1‑148 (MQ=255)
                                                                                        ttCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCgccgcc                                                             >  1:2967687/1‑148 (MQ=255)
                                                                                        ttCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGACACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCgccgcc                                                             >  2:956515/1‑148 (MQ=255)
                                                                                         tCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCa                                                            <  1:2890616/148‑1 (MQ=255)
                                                                                          cACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCaa                                                           >  2:492567/1‑148 (MQ=255)
                                                                                            ccGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATa                                                         >  2:417260/1‑148 (MQ=255)
                                                                                            ccGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATa                                                         >  2:1629221/1‑148 (MQ=255)
                                                                                                 acgaATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGc                                                    <  1:1095267/148‑1 (MQ=255)
                                                                                                 acgaATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGc                                                    <  2:3110103/148‑1 (MQ=255)
                                                                                                 acgaATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGc                                                    >  1:2294811/1‑148 (MQ=255)
                                                                                                  cgaATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCa                                                   <  2:1513058/148‑1 (MQ=255)
                                                                                                   gaATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCAt                                                  <  2:2938865/148‑1 (MQ=255)
                                                                                                      tataGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTaa                                               <  2:1571059/148‑1 (MQ=255)
                                                                                                      tataGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTaa                                               >  2:57890/1‑148 (MQ=255)
                                                                                                       ataGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAAc                                              <  2:3055668/148‑1 (MQ=255)
                                                                                                          gCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACggg                                           <  1:1532310/148‑1 (MQ=255)
                                                                                                             aTAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCg                                        >  2:2338869/1‑148 (MQ=255)
                                                                                                             aTAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCg                                        >  2:1390906/1‑148 (MQ=255)
                                                                                                             aTAACCGGTGTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCg                                        <  1:3282161/148‑1 (MQ=255)
                                                                                                               aaCCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGct                                      >  1:471586/1‑148 (MQ=255)
                                                                                                                aCCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGctc                                     >  2:2071915/1‑148 (MQ=255)
                                                                                                                 ccGGTTTCTGTTAGATCCGGCAAAATGCAGAAGTTCACCAGCTTGACCGCTTAGGCATATGGCATGGCATTACGCACGGCTGCACGGAAGGCGTATTCATCGGCACTCACATGATCCGCCGCGAATAACAGCATAATCGGGTctcaat                                    >  2:540704/1‑143 (MQ=255)
                                                                                                                 ccGGTTTCTGGTAGATCCGGCACAATGCCGAAGGACACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGctct                                    >  2:1036911/1‑148 (MQ=255)
                                                                                                                  cGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCtctc                                   <  1:1547905/148‑1 (MQ=255)
                                                                                                                     tttCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCgg                                >  1:2645690/1‑148 (MQ=255)
                                                                                                                      ttCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCggg                               >  2:368730/1‑148 (MQ=255)
                                                                                                                          ggTAGATCCGGCACAATGCCGAAGGACACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTAt                           >  1:2032940/1‑148 (MQ=255)
                                                                                                                           gTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATg                          >  1:167304/1‑148 (MQ=255)
                                                                                                                           gTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATg                          >  2:2979834/1‑148 (MQ=255)
                                                                                                                             aGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTCTGAc                        >  2:1360384/1‑148 (MQ=255)
                                                                                                                              gATCCGGCACAATGCCGAAGGTCACCAGCGTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACg                       <  1:2272549/148‑1 (MQ=255)
                                                                                                                                tCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCCCATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGtt                     >  2:1434130/1‑148 (MQ=255)
                                                                                                                                tCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGtt                     <  1:2730523/148‑1 (MQ=255)
                                                                                                                                tCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGtt                     >  2:743563/1‑148 (MQ=255)
                                                                                                                                   ggCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCACTCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTg                  <  2:243668/148‑1 (MQ=255)
                                                                                                                                   ggCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTg                  <  2:2977134/148‑1 (MQ=255)
                                                                                                                                     cacaATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTgcc                >  1:2009910/1‑148 (MQ=255)
                                                                                                                                      acaATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTgccg               >  2:2096482/1‑148 (MQ=255)
                                                                                                                                       cactGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTgccgc              <  2:665525/145‑1 (MQ=255)
                                                                                                                                               aaGGACACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTgccgccagcgccg      >  2:395683/1‑148 (MQ=255)
                                                                                                                                               aaGGACACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTgccgccagcgccg      >  2:560841/1‑148 (MQ=255)
                                                                                                                                               aaGGACACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTgccgccagcgccg      >  2:971466/1‑148 (MQ=255)
                                                                                                                                                 ggTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTgccgccagcgccgcc    >  1:815179/1‑148 (MQ=255)
                                                                                                                                                 ggTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTgccgccagcgccgcc    >  1:505547/1‑148 (MQ=255)
                                                                                                                                                 ggTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTgccgccagcgccgcc    >  1:578639/1‑148 (MQ=255)
                                                                                                                                                   tCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTgccgccagcgccgcccg  >  1:1491356/1‑146 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CCACATAGGCCTGAGCGGTTTCCAGATTCGGTTTTTCGACAAACTGCGCCACTTCAAAGGCCACCATATCCTGCTCACCCGCAGACACTTCACCGCGACGAATATAGCCATAACCGGTTTCTGGTAGATCCGGCACAATGCCGAAGGTCACCAGCTTGCCCGCTTCGGCATATGGCATGGCATTACGCACGGCGGCACGGAACGCGTCTTCATCGGCAATCACATGATCCGCCGCCAATACCAGCATTAACGGGTCGCTCTCCGGGCTATGACGTTTTGCCGCCAGCGCCGCCAG  >  CP009273/2117419‑2117713

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑