| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,749 | G→T | 12.7% | intergenic (‑66/+242) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,749 | 0 | G | T | 12.7% | 424.2 / 3.6 | 183 | intergenic (‑66/+242) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base G (92/54); new base T (2/32); total (95/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.19e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 193 total aligned reads displayed.
GATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGA > CP009273/2170602‑2170896 | gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCgag < 1:530562/148‑1 (MQ=255)gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCgag < 2:2487438/148‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑GGATTTCAAAAAATAATGAAAATATTTTTTTTTTAATATAgaga > 2:881091/1‑148 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTT‑CGATTTCAAAATATAATGAAATTATTTTTTTTTTAATATGGAGAt > 2:1969733/1‑148 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAt < 1:197771/148‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAt < 2:2869584/148‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTTAATATAGAGTTAAAGATca > 2:2365009/1‑148 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATca < 1:2614460/148‑1 (MQ=255) gAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACaa < 1:3293498/148‑1 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑GGTTTTGAAAATATAATGAAAATATTTTTTTTTTAATATCGAGATAACGATCACaaa > 2:1037559/1‑148 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTTTTTTTTAATATCGAGATAACGATCACaaa > 2:1037662/1‑148 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACaaaa < 1:487979/148‑1 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACaaaa < 1:2714290/148‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACaaaaa < 1:1127072/148‑1 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTT‑CGATTTGAAAATATAATGTAATTATTTGTTTTTTAATATAGAGATAAAGATCACAAAAACGACa > 2:1102619/1‑148 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑GGATTTAAAAATAAAATGTAATTATTTTTTTTTAAATATCGAGATAAAGCTCACAAAAACGACAAAATg > 2:328555/1‑148 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑AGATTTAAAAAAATAAATAAATTATTTTTTTTTTAATATAGAGATAAACATCACAAAAACGAAAAAATg > 2:324667/1‑148 (MQ=255) tAACCGCCGCGCTGGGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTGT‑CGATTTAAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGaaa < 2:781283/148‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACTTACTTTTTCATATCCTGTCGTTTTTTTT‑CGATTTCAAAATATAATCAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGaaaa < 2:953093/148‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTACAATTAAAAAAAAAAATAAAATAAATT‑TTTTTAAATAAAGACATAAAGTTAAAAAAAAAAAAAatatttaaa > 1:1397446/1‑143 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTT‑CGATTTAAAAATATAATTTAATTATTTTTTTTTTAATATAGAGATAACGATAAAAAAAACGACAATATGataa > 2:238552/1‑148 (MQ=255) aCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGGTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAat > 2:3034707/1‑148 (MQ=255) aCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTT‑GGATTTGAAAATATAATGAAAATAATTTTTTTTAAATATGGAGATAACGATCACAAAAAAGACAATATGaaaaa > 2:2815395/1‑147 (MQ=255) cgccgcGCTGTGCGTTGTTCAGCATCTGCTTTTTCGATACCACGTACATTTTCATATCCTGTCTTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAatta < 2:521734/148‑1 (MQ=255) cgccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CTATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGATATAACTATCACAAAAACGACAATATGAAAatta < 2:423675/148‑1 (MQ=255) gcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑AGATTTCAAAATATAAATAAATTATTTTTTTTTAAATAAAGAGATAACGATCAAAAAAAACACAAAATTAAAAATATTagag > 2:3222796/1‑148 (MQ=255) gtgGGTTGTTCCGAATATTCTTTTTCTATACCACGTAAATTTTCATATCTTGTGTTTTTTTTT‑CGATTTAAAAATATAATTAAATTTTTTTTTTTTAAATATCGAGTTAACTATCACAAAAACGACAATATGAAAATTATTCgaggag < 2:1068356/148‑1 (MQ=255) gtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTT‑TGATTTAAAAATAAAATTAAATTAATTTTTTTTAAAAATAGAGATAAAGATAAAAAAAAACACAAAATGTAAATTAATCaaggag > 2:3085265/1‑148 (MQ=255) ttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTT‑TTATTTTAAAAAAAAATTAAATTATTTTTTTTTTAAAATATAGATAAAAATAACACAAAAAAAAAAAAGAAAAATTTTATAGGGGTGaaa > 1:929884/1‑148 (MQ=255) gtccaccATCTGCTTTGTCGATCCCACTTAAATTTTCTTCTCCTGACTTTTGTTTT‑CGATTACAAAATATAATCAAATTTTTTTTTTTTAAATATCGATATAACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAgg < 1:689159/142‑1 (MQ=255) ttCAGAATCTGCTTTGTCGATACCACTTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTTTTTTAAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGc < 2:3304885/148‑1 (MQ=255) tacAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGc < 2:2183411/146‑1 (MQ=255) tCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAAATATTTTTTTTTAAATATAGAGATAACGATAACAAAAACGACAATATGTAAAATATTAGAGGTGGGaaatggc > 2:2719528/1‑144 (MQ=255) cAGCATCTTCTTTGTCCACACCACGTATATTTTAATATCCTGTGTTTTTTTTT‑CTATTAAAAAATATAATAAATTTTTTTTTTTTTAAATATCGATATCACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaa < 1:3056808/148‑1 (MQ=255) cgCATCTGCTTTGTCGATACCACTTACATTTACATACCCTGTCTTTTTTTTT‑CTTTTTAAAAATATAATTAATTTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaa < 1:1904457/147‑1 (MQ=255) agaaTCTGTTTTGTCTAAACCACTTACATTTTAATATCCTTTCTTTTGTTTT‑ATATTAAAAAATATAATTAAATTATTTTTTTTTAAATATCGACAAAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaa < 1:2540428/145‑1 (MQ=255) agaaTCTGCTTTGTCTATCCCAGCTACTTTTTAATATCCTGTGTTTTTTTTT‑TGTTTAAAAATTATATTCAATTTTTTTTTTTTTAAATATCGAGAAAACGTTCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaa < 1:885358/145‑1 (MQ=255) aTCTGCTTTGTCGAGACCACGTACATTTACATATCCTGTCTTTTGTTTT‑CTTTTACAAAATATAATCAATTTTTTTGTTTTTAAATATCGATATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaaaa < 1:417909/148‑1 (MQ=255) tattattttTCTATACAACCTAAATTTTAATATCCTGTGTTTTGTTTT‑ATATTTAAAAATATAATTAAATTTTTTTTTTTAAAATATCTATAAAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaaaaa < 1:1188866/143‑1 (MQ=255) cTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTT‑AGATTTGAAAATATAATTAAATTATTTTTTTTTTAATATCGTGATAACGATCACAAAAAAGAAAAAAAGAAAAATATTGGCGGGGTGAAACGCacaaaaaa > 2:1977716/1‑147 (MQ=255) cTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTT‑CTATTTCAAAAAAAAATGTAAATATTTTTTTTTAAATATCGAGATAACCATAACAAAAACCACAAAATGAAAATTCTTAGAGGAGTGCAAGGGCAAAAAACGGc > 2:3140517/1‑148 (MQ=255) cGATACCACGTACATTTTCATATCCTGTCGTGTGTTTT‑GGATTTCAAAATATAATTTAAATATTTTTTTTTATATATAGTGATAAAGAACACAAAAAAGACAAAATTTAAATTATTTGAGGTGGGTAAGGGCAAAAAACTGCCTGCCg > 2:2005964/1‑148 (MQ=255) aTACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CTATTACAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGAt < 2:2933885/148‑1 (MQ=255) gTAAATTTTCATATCCTGTCTTTTTTTTT‑CTATTTCAAAATATATTGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAg < 2:1256592/148‑1 (MQ=255) aCATTTTCATATCCTGTCGTGTGTTTT‑CGATTTCAAAATATAATGTAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACCACACAAAGAAAAATATTCGAGGGGTGGAAGGCCAAAAAACGGCCTCCCGCGAgggcacac > 2:2959608/1‑143 (MQ=255) tttCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 2:1271837/148‑1 (MQ=255) cATATCCGTTCGTTTGTTTT‑CGATTACAAAATATAATTAAATTATTTGTTTTTAAATATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaa < 2:1222132/148‑1 (MQ=255) gcgtGTCGTTTGTTTT‑CTTTTAAAAAATATAATTAAATTATTTTTTTTTAAATATCGAGAAAACCATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTg < 1:501896/145‑1 (MQ=255) tGTCGTTTTTTTT‑CTATTAAAAAAAATAATTAATTTTTTTTTTTTTAAATATCGAGAAAACGAACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcgc < 1:979448/148‑1 (MQ=255) ggtgttttttttt‑CTATTTAAAAATATAATTAATTTATTTGTTTTTAAATATCTATAAAACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcgc < 1:981953/143‑1 (MQ=255) gTCTTTTTTTTA‑AGATTTAAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGcgcg < 2:2301374/148‑1 (MQ=255) cttttgtttT‑CTATTACAAAATATAATTAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg < 1:1663524/146‑1 (MQ=255) gtttttttT‑CTATTTCAAAATATAATTAAATTATTTTTTTTTAAATATCGATATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtgt < 2:616705/148‑1 (MQ=255) ttttttt‑CTATTAAAAAATATAATCAAATTTTTTTTTTTTAAATAGCGACATACCCAACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt < 1:677109/145‑1 (MQ=255) ttgtttT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:2381717/1‑148 (MQ=255) tgtttT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt > 1:1032232/1‑148 (MQ=255) gtttT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 2:3143954/148‑1 (MQ=255) ttt‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt > 1:1263350/1‑148 (MQ=255) t‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGc > 2:1083107/1‑148 (MQ=255) gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGGTTTTATGCCg > 2:2191739/1‑148 (MQ=255) aTTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 1:2071868/1‑148 (MQ=255) aaaaaTATAATTAAATTATTTTTTTTTAAATTTCGATATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCTGGATGc < 1:455164/147‑1 (MQ=255) aaaTAAAATTATATTTTTTTTTTTTAAATATCTATATAACTAACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg < 1:3085265/148‑1 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg > 2:1884784/1‑148 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg > 1:2426860/1‑148 (MQ=255) tataATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 1:2181229/1‑148 (MQ=255) tataATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 1:3179505/1‑148 (MQ=255) tataATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGAGAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 1:1574305/1‑148 (MQ=255) tataATCAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt < 2:112764/148‑1 (MQ=255) taATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa > 1:1036655/1‑148 (MQ=255) taATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa > 2:2362676/1‑148 (MQ=255) taATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa > 2:2100723/1‑148 (MQ=255) aTGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc > 2:94183/1‑148 (MQ=255) aTGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc > 2:3015987/1‑148 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 2:518060/1‑148 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 2:611244/1‑148 (MQ=255) gAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt > 1:2400866/1‑148 (MQ=255) aattttttttttttTAAATTTCGATATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 2:2503380/142‑1 (MQ=255) aaaTTTTTTTTTTTTAAATAAGCATATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 1:1843523/148‑1 (MQ=255) aaaTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 2:1766018/148‑1 (MQ=255) aaTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc > 1:2281653/1‑148 (MQ=255) attattTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg < 2:2155705/148‑1 (MQ=255) attattTGTTTTTATATATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg < 2:1368847/148‑1 (MQ=255) attattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg < 2:2566424/148‑1 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 1:856245/1‑148 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 1:856259/1‑148 (MQ=255) tttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:944670/1‑148 (MQ=255) tttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:2542132/1‑148 (MQ=255) ttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa > 1:2096450/1‑148 (MQ=255) ttttAAATATCGATATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc < 1:1102619/148‑1 (MQ=255) ttttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc > 2:1138282/1‑148 (MQ=255) ttAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTa < 2:1596162/148‑1 (MQ=255) tatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 2:3200352/1‑148 (MQ=255) tatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 2:2994570/1‑148 (MQ=255) atCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAgg > 2:882889/1‑148 (MQ=255) tCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGc < 2:1206360/148‑1 (MQ=255) cGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATCCGTGGCAGTGCTATGTAGGCa > 2:2503949/1‑148 (MQ=255) agaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATg < 1:2948935/148‑1 (MQ=255) gaTAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGa > 1:1742064/1‑148 (MQ=255) gaTAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGa > 1:1742113/1‑148 (MQ=255) | GATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGA > CP009273/2170602‑2170896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |