| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,757 | T→A | 10.7% | intergenic (‑74/+234) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,757 | 0 | T | A | 10.7% | 459.2 / 7.0 | 187 | intergenic (‑74/+234) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base T (95/68); new base A (3/20); total (99/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.77e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 193 total aligned reads displayed.
ATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGC > CP009273/2170610‑2170904 | atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAt < 2:2869584/148‑1 (MQ=255)atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAt < 1:197792/148‑1 (MQ=255)atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAt < 1:197771/148‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATc < 2:374173/148‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTTAATATAGAGTTAAAGATca > 2:2365009/1‑148 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATca < 1:2614460/148‑1 (MQ=255) ttGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑GTATTT‑AAAAATATAATGTAATTATTTGTTTTTTAAAATCGAGATAACCATcaa > 2:1057893/1‑147 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑GGTTTT‑GAAAATATAATGAAAATATTTTTTTTTTAATATCGAGATAACGATCACaaa > 2:1037559/1‑148 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACaaaa < 1:487979/148‑1 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACaaaa < 1:2714290/148‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACaaaaa < 1:1127072/148‑1 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGAc < 2:3268791/148‑1 (MQ=255) tAACCGCCGCGCTGTGCTTTTTTCAGCATCTGCTTTGTCGATACCACGTAAATTTTAATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGaaa < 2:2354771/148‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACTTACTTTTTCATATCCTGTCGTTTTTTTT‑CGATTT‑CAAAATATAATCAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGaaaa < 2:953093/148‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTACAATTA‑AAAAAAAAAATAAAATAAATT‑TTTTTAAATAAAGACATAAAGTTAAAAAAAAAAAAAatatttaaa > 1:1397446/1‑143 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTT‑CGATTT‑AAAAATATAATTTAATTATTTTTTTTTTAATATAGAGATAACGATAAAAAAAACGACAATATGataa > 2:238552/1‑148 (MQ=255) acggccgcGGTGTGCGTTGTTCAGAATCTGCTTTTTCTATACCACTTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑AAAAATATAATTAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAat < 2:3200557/145‑1 (MQ=255) aCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTT‑GGATTT‑GAAAATATAATGAAAATAATTTTTTTTAAATATGGAGATAACGATCACAAAAAAGACAATATGaaaaa > 2:2815395/1‑147 (MQ=255) cgccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAatta < 2:3017914/148‑1 (MQ=255) cgccgcGCTGTGCGTTGTTCAGCATCTGCTTGGTCGATACCCCGTACATTTTCATATCCGGACGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAatta < 2:2981850/148‑1 (MQ=255) gcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑AGATTT‑CAAAATATAAATAAATTATTTTTTTTTAAATAAAGAGATAACGATCAAAAAAAACACAAAATTAAAAATATTagag > 2:3222796/1‑148 (MQ=255) gtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTACATATCCTGTCTTTTGTTTT‑CTATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACTATCACAAAAACGACAATATGAAAATTATTCgaggag < 2:1439218/148‑1 (MQ=255) gtgCGTTGTACAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑AAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCgaggag < 2:1068399/148‑1 (MQ=255) tgCGTTGTTCAGCAACTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGt < 2:1101821/148‑1 (MQ=255) ttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTT‑GGATTT‑AAAAAAAAAAATAAAATAATTTTTTTTAAATATAGAGATAAAGATCACAAAAACGACAAAAAGAAAAATATTGGAGGAGTGcaa > 2:1237016/1‑148 (MQ=255) ttCAGCATGTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGc < 2:2183172/148‑1 (MQ=255) tCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAAATATTTTTTTTTAAATATAGAGATAACGATAACAAAAACGACAATATGTAAAATATTAGAGGTGGGaaatggc > 2:2719528/1‑144 (MQ=255) cAGCATCTTCTTTGTCCACACCACGTATATTTTAATATCCTGTGTTTTTTTTT‑CTATTA‑AAAAATATAATAAATTTTTTTTTTTTTAAATATCGATATCACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaa < 1:3056808/148‑1 (MQ=255) cgCATCTGCTTTGTCGATACCACTTACATTTACATACCCTGTCTTTTTTTTT‑CTTTTT‑AAAAATATAATTAATTTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaa < 1:1904457/147‑1 (MQ=255) agaaTCTGTTTTGTCTAAACCACTTACATTTTAATATCCTTTCTTTTGTTTT‑ATATTA‑AAAAATATAATTAAATTATTTTTTTTTAAATATCGACAAAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaa < 1:2540428/145‑1 (MQ=255) aTCTGCTTTGTCGAGACCACGTACATTTACATATCCTGTCTTTTGTTTT‑CTTTTA‑CAAAATATAATCAATTTTTTTGTTTTTAAATATCGATATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaaaa < 1:417909/148‑1 (MQ=255) tattattttTCTATACAACCTAAATTTTAATATCCTGTGTTTTGTTTT‑ATATTT‑AAAAATATAATTAAATTTTTTTTTTTAAAATATCTATAAAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaaaaa < 1:1188866/143‑1 (MQ=255) cTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTT‑AGATTT‑GAAAATATAATTAAATTATTTTTTTTTTAATATCGTGATAACGATCACAAAAAAGAAAAAAAGAAAAATATTGGCGGGGTGAAACGCacaaaaaa > 2:1977716/1‑147 (MQ=255) cTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTT‑AGATTTGAAAAAAAAAATTAAATAATTT‑TTTTTTTATATAGATATAAAGATGACAAAAAAGAACAAATGTAAAATAATTGAGGCGTGTATAGCaaaaaaaaagg > 1:3229847/1‑144 (MQ=255) cTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑AGTTTT‑GAAAATATAATTAAATTATTTTTTTTTTAAATTAGAGTTAAAGATCACAAAAAAGACAATATGTAAATTTTTGGGGGTGGGTAAGGCAAAAAAACGGc > 2:3140523/1‑148 (MQ=255) cTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTT‑AGTTTT‑AAAAATAAAATGAAATTATTTTTTTTTATATATAGAGATAAAAATAACAAAAACGAAAATAAGAAAATTATAAGAGGAGTGAAAGGCaacaaaaagtc > 2:3139917/1‑144 (MQ=255) cGATACCACGTACATTTTCATATCCTGTCGTGTGTTTT‑GGATTT‑CAAAATATAATTTAAATATTTTTTTTTATATATAGTGATAAAGAACACAAAAAAGACAAAATTTAAATTATTTGAGGTGGGTAAGGGCAAAAAACTGCCTGCCg > 2:2005964/1‑148 (MQ=255) aTACCACGTACATTTTCATATCCTGTCTTTTGTTTT‑CGATTT‑AAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGAt < 2:114548/148‑1 (MQ=255) aTACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑AGATTT‑AAAAAAATAATTAAAATATTTTTTTTTTAATATAGAGATAAAGATCACAAAAACGACAATATTTAAATTATTAGAGGTGTGAAAGGCAAAAAAACGGCCGCCCGAt > 2:49595/1‑148 (MQ=255) gTACATTTTCTTATCCTGTCTTTTGTTTT‑CTATTT‑AAAATTATAATGAATTTATTTTTTTTTAAATATCGATATAACGATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAg < 2:1257701/148‑1 (MQ=255) tACATTTTCATATCCTGTCGTTTGTTTT‑GGATTT‑CAAAATATAATTAAAATATTTTTTTTTAAATATCGAGATAACGATAACAAAAAAGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc > 2:776619/1‑148 (MQ=255) aCATTTTCATATCCTGTCGTGTGTTTT‑GGATTT‑GAAAATATAAAGAAAATATTTTTTTTTAAATATAGAGAAAACGAACACAAAAACGACAATATTTAAATTATTGGATGTGTGTAATGCAAAAAAAAGGGCGCCCCATAGGGAAGcc > 2:2959517/1‑148 (MQ=255) tttttCATTGCCTGTGTTTTTTTTT‑CTTTTA‑AAAAATATAATAAATTTTTTTTTTTTTAATTATGGATATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGt < 1:532652/147‑1 (MQ=255) tttCATATCCTGTCGTTTGTTTT‑CTATTT‑AAAAATATAATGAAATTATTTTTTTTTAAATATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 2:2920657/148‑1 (MQ=255) tttCATATCCTGTCGTGTGTTTT‑AGATTT‑CAAAAAAAAATGTAAATATTTGTTTTTAAATATCGAGATAAAGCAAACAAAAACGACAATAAGCAAATTATTGGTGGGGTGCAAGGCCAAAAAAACGCCTCCCGCTAGGGCACCCGGAg > 2:3198877/1‑148 (MQ=255) cagatCCTGTCGTTTGTTTT‑CTTTTT‑CAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaa < 2:1222041/145‑1 (MQ=255) cATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaa < 2:1782950/148‑1 (MQ=255) gcgtGTCGTTTGTTTT‑CTTTTA‑AAAAATATAATTAAATTATTTTTTTTTAAATATCGAGAAAACCATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTg < 1:501896/145‑1 (MQ=255) tggcttttttttt‑CTATTT‑AAAAATATAATTAATTTTTTTTTTTTTAAATATCGATATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcgc < 1:1587542/143‑1 (MQ=255) ggtgttttttttt‑CTATTT‑AAAAATATAATTAATTTATTTGTTTTTAAATATCTATAAAACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcgc < 1:981953/143‑1 (MQ=255) tttgtttT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 1:729880/1‑148 (MQ=255) ttttttt‑CTATTA‑AAAAATATAATAAAATTTTTTTTTTTTAAATATCTATATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt < 1:677110/145‑1 (MQ=255) ttgtttT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:306142/1‑148 (MQ=255) ttgtttT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:2381717/1‑148 (MQ=255) ttgtttT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:1338473/1‑148 (MQ=255) ttgtttT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:1760082/1‑148 (MQ=255) tgtttT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt > 1:1032232/1‑148 (MQ=255) ttttt‑CTATTA‑AAAAATATAATTAATTTTTTTTTTTTTAAATATCTATATAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 1:969156/147‑1 (MQ=255) ttt‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt > 1:1263350/1‑148 (MQ=255) gATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg > 2:2191407/1‑148 (MQ=255) aaaaaTATAATTAAATTATTTTTTTTTAAATTTCGATATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCTGGATGc < 1:455164/147‑1 (MQ=255) aaaTAAAATTATATTTTTTTTTTTTAAATATCTATATAACTAACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg < 1:3085265/148‑1 (MQ=255) aaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGGTTTTATGCCGGATGCGgt > 1:899704/1‑148 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg > 1:2426860/1‑148 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg > 2:1884784/1‑148 (MQ=255) tataATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 1:2181229/1‑148 (MQ=255) tataATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 1:3179505/1‑148 (MQ=255) tataATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 2:1133975/1‑148 (MQ=255) tataATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt < 2:112756/148‑1 (MQ=255) taATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa > 1:1036655/1‑148 (MQ=255) taATCAAATTTTTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa < 2:597959/148‑1 (MQ=255) aTGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc > 2:94183/1‑148 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAATGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 2:521341/1‑148 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 2:611320/1‑148 (MQ=255) gAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt > 1:2400866/1‑148 (MQ=255) aattttttttttttTAAATTTCGATATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 2:2503380/142‑1 (MQ=255) aaaTTTTTTTTTTTTAAATAAGCATATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 1:1843523/148‑1 (MQ=255) aaaTTATTTTTTTTTAAATATCGAGATAACGATCACAACAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 2:846617/148‑1 (MQ=255) aaTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc > 1:2281653/1‑148 (MQ=255) attattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg < 2:2155488/148‑1 (MQ=255) attattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg < 2:2566424/148‑1 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGTTCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAATCGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt < 2:2217545/148‑1 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 1:856273/1‑148 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 1:856258/1‑148 (MQ=255) attTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTgg < 2:3012084/148‑1 (MQ=255) tttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:2542132/1‑148 (MQ=255) tttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:944670/1‑148 (MQ=255) ttGTTTTTAAATATCTAGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa < 2:329578/148‑1 (MQ=255) ttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa > 1:2096450/1‑148 (MQ=255) ttttAAATATCGATATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc < 1:1102619/148‑1 (MQ=255) ttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTa > 1:980238/1‑148 (MQ=255) atCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAgg > 2:882889/1‑148 (MQ=255) cGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATCCGTGGCAGTGCTATGTAGGCa > 2:2503949/1‑148 (MQ=255) ataTAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGAAAAAAAACTGCCGCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATg < 1:2949091/146‑1 (MQ=255) gaTAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGa > 1:1742064/1‑148 (MQ=255) gaTAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGa > 1:1742113/1‑148 (MQ=255) aaCGATCACAAAAACGACAATATTAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGCCCACCCGATAGGGAAGCCGTAGCAAAGAGCTCGTGTTTTAATGCCGGATGAGGTCTAAACATAAGAGTCAGTGATATCTAGGCAAGATaa > 1:1540444/1‑148 (MQ=255) cGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGa < 2:2096450/148‑1 (MQ=255) aTCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACg > 1:16692/1‑148 (MQ=255) tCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 1:460667/1‑148 (MQ=255) | ATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTT‑CGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGC > CP009273/2170610‑2170904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |