| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,293,847 | C→A | 5.7% | D796Y (GAC→TAC) | napA ← | nitrate reductase, periplasmic, large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,293,847 | 0 | C | A | 5.7% | 764.5 / 14.4 | 200 | D796Y (GAC→TAC) | napA | nitrate reductase, periplasmic, large subunit |
| Reads supporting (aligned to +/- strand): ref base C (85/103); new base A (6/6); total (91/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 205 total aligned reads displayed.
AGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCTTTCGCATCCAGCGGGTGAATAAA > CP009273/2293700‑2293994 | aGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTc > 1:1078013/1‑148 (MQ=255)aGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTc > 1:762329/1‑148 (MQ=255)aGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACATTCTCCAGTTTGACCGCGCACTACTTGAAGTCCGACTCTTTCGAGAGCGGATCGGTCGAATCCAGCGTCAGTTTGTTAAACAACTGTGCGGCGTc > 1:2419534/1‑148 (MQ=255) cggcggcgACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTAga < 2:2792558/148‑1 (MQ=255) ggcggcgACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCgaa > 1:1990117/1‑148 (MQ=255) cggcgACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGTAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCTGTTTGTTAACCAACTGTGCGGCGTCgaaga < 2:2274515/148‑1 (MQ=255) cggcgACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCgaaga < 1:1461977/148‑1 (MQ=255) cgACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACg < 2:288246/148‑1 (MQ=255) cgACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACg > 2:2756676/1‑148 (MQ=255) aCCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGc > 1:2329582/1‑148 (MQ=255) aCCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGc < 2:1598690/148‑1 (MQ=255) ccATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCa < 1:3051678/148‑1 (MQ=255) ccATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCa < 1:150698/148‑1 (MQ=255) ttttGAGGTTTCGCTGACCGGGACATAATGTCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGt > 1:1608809/1‑148 (MQ=255) ttttGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGt > 2:326056/1‑148 (MQ=255) ttttGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGt > 1:239260/1‑148 (MQ=255) ttGAGGTTTCGCTGACCGGGACATAATGGATTACACCTTCTCAAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGAATGTac < 2:2154842/148‑1 (MQ=255) tGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTaca > 2:1942344/1‑148 (MQ=255) ggTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTAGAAGAACGGCATGTACACCa < 1:982808/148‑1 (MQ=255) ttCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGc > 2:1761591/1‑148 (MQ=255) tCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGcc < 2:2648967/148‑1 (MQ=255) tCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGcc < 1:538871/148‑1 (MQ=255) tCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGcc < 2:908088/148‑1 (MQ=255) cGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGccc < 1:368897/148‑1 (MQ=255) aCCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTgg < 2:33616/148‑1 (MQ=255) ggACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGa > 1:1126194/1‑148 (MQ=255) aTAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGt < 2:3162567/148‑1 (MQ=255) tAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGtt > 2:50029/1‑148 (MQ=255) tAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGtt < 1:1525702/148‑1 (MQ=255) tAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGtt < 2:239260/148‑1 (MQ=255) aaTGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTa < 1:1294008/148‑1 (MQ=255) aaTGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTa > 2:2560080/1‑148 (MQ=255) aaTGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTa < 2:2463024/148‑1 (MQ=255) aTGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTAGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTAc > 1:2496649/1‑148 (MQ=255) tGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACg < 2:2911719/148‑1 (MQ=255) tGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACg > 2:2357524/1‑148 (MQ=255) tGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACg < 1:708110/148‑1 (MQ=255) ggCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGa > 1:2633938/1‑148 (MQ=255) gCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGAc > 1:1157290/1‑148 (MQ=255) ttACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACcg < 1:2756889/148‑1 (MQ=255) ccTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGt > 1:506019/1‑148 (MQ=255) ttCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGttt < 2:2414195/148‑1 (MQ=255) tctcCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTc > 1:3109855/1‑148 (MQ=255) ctcCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTca < 1:1769830/148‑1 (MQ=255) ctcCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTca < 2:2987721/148‑1 (MQ=255) tcCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTcaa > 2:2056904/1‑148 (MQ=255) tcCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTcaa < 2:1156904/148‑1 (MQ=255) cAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTcaaca < 2:2004423/148‑1 (MQ=255) aGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTcaacaa > 1:2352989/1‑148 (MQ=255) gTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAAt < 1:445303/148‑1 (MQ=255) ttGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCg > 2:1205655/1‑148 (MQ=255) aCCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCgaga < 2:2636748/148‑1 (MQ=255) aCCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCgaga > 2:794992/1‑148 (MQ=255) cgcgCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATc < 2:252866/148‑1 (MQ=255) gcgcACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCa < 2:580599/148‑1 (MQ=255) cgcACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCAc < 2:1819740/148‑1 (MQ=255) aCTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTc > 2:1122143/1‑148 (MQ=255) aCTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTc > 1:591429/1‑148 (MQ=255) tcttGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGcc > 1:2850882/1‑148 (MQ=255) tcttGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGcc > 2:3204648/1‑148 (MQ=255) cttGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCa > 1:2587102/1‑148 (MQ=255) cttGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCa > 1:811846/1‑148 (MQ=255) cttGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTAGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCa < 2:809357/148‑1 (MQ=255) aGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCg < 2:2333921/148‑1 (MQ=255) aGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTAGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCg > 2:1608731/1‑148 (MQ=255) gTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCga < 1:1874315/148‑1 (MQ=255) gTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCga < 1:1874288/148‑1 (MQ=255) ccGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCgaga < 1:2756676/148‑1 (MQ=255) cGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGaa < 1:3045024/148‑1 (MQ=255) gTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGaaa < 1:2204866/148‑1 (MQ=255) ctTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACcac > 1:1360087/1‑148 (MQ=255) ttCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACcactt > 2:1998979/1‑148 (MQ=255) gagaGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACcactttca < 2:1334572/148‑1 (MQ=255) gagaGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACcactttca < 2:102080/148‑1 (MQ=255) gagCGGATCGGTCGTATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACcactttcact > 2:834293/1‑148 (MQ=255) gATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTc > 1:860002/1‑148 (MQ=255) tCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGc > 1:2863032/1‑148 (MQ=255) tCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGc > 1:1409082/1‑148 (MQ=255) cGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGcc < 1:1942344/148‑1 (MQ=255) ggTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCa < 2:2369338/148‑1 (MQ=255) tCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACg > 1:2264621/1‑148 (MQ=255) tCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCa > 2:1280227/1‑148 (MQ=255) tCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCa > 1:179738/1‑148 (MQ=255) ccAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAg > 1:1921356/1‑148 (MQ=255) ccAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGAGCAg < 1:2786219/148‑1 (MQ=255) tCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATcgcg > 2:489371/1‑148 (MQ=255) tCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATcgcg < 2:2329582/148‑1 (MQ=255) tCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATcgcg > 1:970146/1‑148 (MQ=255) gTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCgcgcgc < 2:1043069/148‑1 (MQ=255) ttGTTAACCAACTGTGCGGCGTAGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCtt > 2:1216638/1‑148 (MQ=255) tGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCttt < 1:2560080/148‑1 (MQ=255) ttAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCTTTCg > 2:1429727/1‑148 (MQ=255) tAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCTTTCGc < 2:2264621/148‑1 (MQ=255) ccAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCTTTCGCATc < 1:272286/148‑1 (MQ=255) aCTGTGCGGCGTAGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCTTTCGCATCCAg < 2:2496649/148‑1 (MQ=255) cTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCTTTCGCATCCAGc < 2:746820/148‑1 (MQ=255) gtgCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCATCAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCTTTCGCATCCAGCgg > 1:557959/1‑148 (MQ=255) gtgCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCTTTCGCATCCAGCgg > 2:3110917/1‑148 (MQ=255) cggcgTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCTTTCGCATCCAGCGGGTg > 1:1727227/1‑148 (MQ=255) gcgTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCTTTCGCATCCAGCGGGTGaa > 2:1990793/1‑148 (MQ=255) | AGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGTTTGACCGCGCACTTCTTGAAGTCCGTCTCTTTCGAGAGCGGATCGGTCGCATCCAGCGTCAGTTTGTTAACCAACTGTGCGGCGTCGAAGAACGGCATGTACACCAGGCCCTGTGGCGGACGGTTACGACCGCGCGTTTCAACAATCGAGATCACTTCGCCACGGCGAGAAACCACTTTCACTTTGTCGCCACGGCGCAGATCGCGCGCTTTCGCATCCAGCGGGTGAATAAA > CP009273/2293700‑2293994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |