BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP009273	2,379,408	C→T	9.3%	P24S (CCC→TCC)	yfbL →	putative peptidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	2,379,408	0	C	T	9.3%	639.2 / 38.7	193	P24S (CCC→TCC)	yfbL	putative peptidase
Reads supporting (aligned to +/- strand): ref base C (92/83); new base T (10/8); total (102/91)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01

Only 100 of 197 total aligned reads displayed.

TGCTAATCTTAATAAAATACAATATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAATATATAAAAGAGG  >  CP009273/2379261‑2379555

tGCTAATCTTAATAAAATACAATATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAAc                                                                                                                                                     <  1:2903576/148‑1 (MQ=255)

 gCTAATCTTAATAAAATACAATATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAAcc                                                                                                                                                    >  1:2420146/1‑148 (MQ=255)

   tAATCTTAATAAAATACAATATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCt                                                                                                                                                  <  2:2346521/148‑1 (MQ=255)

    aaTCTTAATAAAATACAATATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTg                                                                                                                                                 <  2:291802/148‑1 (MQ=255)

        ttAATAAAATACAATATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAATCCTGGGTc                                                                                                                                             <  1:599046/148‑1 (MQ=255)

        ttAATAAAATACAATATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAATCCTGGGTc                                                                                                                                             <  1:1883717/148‑1 (MQ=255)

            taaAATACAATATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATg                                                                                                                                         >  1:750686/1‑148 (MQ=255)

              aaaTACAATATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCa                                                                                                                                       >  1:1476008/1‑148 (MQ=255)

              aaaTACAATATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCa                                                                                                                                       <  2:427452/148‑1 (MQ=255)

                 tACAATAACGAAACCCATAGCAAATAATGATTCAACAACGCAACCAATTAATAATTTGCATATGAAAAAAAAAATCTTAGCTTTTATAATATTATTTGTGTTTTTACTACCTATGATTATTTTTTACCAACACTGGGTCAATGCATTa                                                                                                                                    >  1:191978/1‑148 (MQ=255)

                   cAATATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTAcc                                                                                                                                  >  1:2371097/1‑148 (MQ=255)

                    aaTATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCg                                                                                                                                 <  1:165259/148‑1 (MQ=255)

                     atatCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGt                                                                                                                                >  2:2413925/1‑148 (MQ=255)

                      tatCGAATACCATATCAAATAATGATTCAACAAAGCAACCCATTTATTATTTTCATATGAATAAAATAATCTTTGCTTTTATTATATTTTTTGTGTTTTTACTCCCTATGATTATTTTTTACCAATCCTGGGTCAATGCATTACCGTc                                                                                                                               <  1:227725/148‑1 (MQ=255)

                      tatCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTACCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTc                                                                                                                               >  2:1779183/1‑148 (MQ=255)

                         cGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAAc                                                                                                                            >  2:2217033/1‑148 (MQ=255)

                            aaCCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGcc                                                                                                                         <  2:3309623/148‑1 (MQ=255)

                             aCCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGccc                                                                                                                        >  2:2885911/1‑148 (MQ=255)

                                 aTAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGccc                                                                                                                        <  1:1060192/144‑1 (MQ=255)

                                  tAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTAACGTCAACGCCCCGaca                                                                                                                   >  2:2633852/1‑148 (MQ=255)

                                    gCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACg                                                                                                                 <  2:529220/148‑1 (MQ=255)

                                     cAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGc                                                                                                                <  2:1652520/148‑1 (MQ=255)

                                      aaaTAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCa                                                                                                               <  2:1182220/148‑1 (MQ=255)

                                        ataatGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAg                                                                                                             >  1:1449334/1‑148 (MQ=255)

                                          aatGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTc                                                                                                           >  1:527981/1‑148 (MQ=255)

                                          aatGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTc                                                                                                           >  1:1664540/1‑148 (MQ=255)

                                            tGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCt                                                                                                         >  1:2875217/1‑148 (MQ=255)

                                                   acaacGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAATCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAAt                                                                                                  >  1:1872263/1‑148 (MQ=255)

                                                    caacGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAAtt                                                                                                 <  1:2718179/148‑1 (MQ=255)

                                                        gCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGaa                                                                                             <  1:1192556/148‑1 (MQ=255)

                                                        gCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGaa                                                                                             <  1:2842897/148‑1 (MQ=255)

                                                           aCCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGaaaaa                                                                                          <  2:109239/148‑1 (MQ=255)

                                                           aCCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGaaaaa                                                                                          >  2:2265311/1‑148 (MQ=255)

                                                            cccATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGaaaaaa                                                                                         <  1:41124/148‑1 (MQ=255)

                                                            ccaaTTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAATCCTGGGTCAATGCATTACCGTAAACGCCCCGACACGCAAGTCCTGAGCAATTAGaaaaaa                                                                                         <  1:1358169/145‑1 (MQ=255)

                                                             ccATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAAc                                                                                        <  1:2032484/148‑1 (MQ=255)

                                                               aTTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAg                                                                                      <  2:388673/148‑1 (MQ=255)

                                                                 taataaTTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGtt                                                                                    >  1:430747/1‑148 (MQ=255)

                                                                   ataatTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCg                                                                                  <  1:2124263/148‑1 (MQ=255)

                                                                    taatTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGt                                                                                 <  1:2852717/148‑1 (MQ=255)

                                                                     aatTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAATCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGtt                                                                                >  1:1032955/1‑148 (MQ=255)

                                                                      atTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTa                                                                               >  2:931658/1‑148 (MQ=255)

                                                                        ttGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATc                                                                             >  1:3227357/1‑148 (MQ=255)

                                                                        ttGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATc                                                                             <  2:20571/148‑1 (MQ=255)

                                                                        ttGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATc                                                                             <  2:3264117/148‑1 (MQ=255)

                                                                        tatcATATGAAAAAAATAATATTTGATTTTATTAGATTATTTGTGTTTTTACTCCCTATTATTATATTTTACAAACCCTGTGTCAATGCATAACCGTCAACGCCCAAACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATc                                                                             >  1:2747442/4‑148 (MQ=255)

                                                                         tGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCt                                                                            >  1:1519657/1‑148 (MQ=255)

                                                                          gCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCtt                                                                           <  2:1049602/148‑1 (MQ=255)

                                                                          gCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCtt                                                                           <  2:1290526/148‑1 (MQ=255)

                                                                           cATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTa                                                                          <  1:393761/148‑1 (MQ=255)

                                                                             tatGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCACTTAGAAAAAACAGTTCGTTATCTTaaa                                                                        >  2:2743996/1‑146 (MQ=255)

                                                                             tatGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTaca                                                                        >  1:2990048/1‑148 (MQ=255)

                                                                                    aaaaTAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACtg                                                                 >  1:941203/1‑148 (MQ=255)

                                                                                    aaaaTAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACtg                                                                 >  2:1561568/1‑148 (MQ=255)

                                                                                    aaaaTAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACtg                                                                 >  1:1308554/1‑148 (MQ=255)

                                                                                    aaaaTAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACtg                                                                 >  1:3263628/1‑148 (MQ=255)

                                                                                      aataatCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACtgtg                                                               >  1:2554151/1‑148 (MQ=255)

                                                                                       ataatCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGc                                                              >  1:2172771/1‑148 (MQ=255)

                                                                                        taatCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCa                                                             >  1:86698/1‑148 (MQ=255)

                                                                                        taatCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCa                                                             >  1:3028920/1‑148 (MQ=255)

                                                                                        taatCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCa                                                             <  2:2371097/148‑1 (MQ=255)

                                                                                        taatCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCa                                                             >  1:990481/1‑148 (MQ=255)

                                                                                           tCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATcc                                                          >  1:576907/1‑148 (MQ=255)

                                                                                            cTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCa                                                         <  2:1805880/148‑1 (MQ=255)

                                                                                              ttGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACg                                                       <  2:932704/148‑1 (MQ=255)

                                                                                                  ttttATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGt                                                   >  1:1697687/1‑148 (MQ=255)

                                                                                                  ttttATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGt                                                   >  2:1902775/1‑148 (MQ=255)

                                                                                                   tttATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTg                                                  >  2:972787/1‑148 (MQ=255)

                                                                                                   tttATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTg                                                  <  1:2563997/148‑1 (MQ=255)

                                                                                                    ttattaTATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGc                                                 >  1:55860/1‑148 (MQ=255)

                                                                                                     tattatattaTTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGcc                                                >  1:972576/1‑148 (MQ=255)

                                                                                                     tattatattaTTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGcc                                                >  1:972626/1‑148 (MQ=255)

                                                                                                       ttatattatTTGTGTTTTTACTCCCTATGATTATTTTTTACCAATCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCACGTCCTGAGCACTTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGa                                              >  2:3111822/1‑148 (MQ=255)

                                                                                                       ttatattatTTGTGTTTTTACTCCCTATGATTATTTTTTACCAATCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGa                                              >  2:639388/1‑148 (MQ=255)

                                                                                                       ttatattatTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGa                                              >  1:1134519/1‑148 (MQ=255)

                                                                                                        tatattatTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGAc                                             >  2:1813434/1‑148 (MQ=255)

                                                                                                         atattatTTGTGTTTTTACTCCCTATGATTATTTTTTACCAATCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACa                                            <  2:436876/148‑1 (MQ=255)

                                                                                                           attattTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAat                                          <  1:2808117/148‑1 (MQ=255)

                                                                                                           attattTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAat                                          <  2:1367390/148‑1 (MQ=255)

                                                                                                            ttattTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAata                                         <  2:3200917/148‑1 (MQ=255)

                                                                                                             tattTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAatat                                        >  2:1143695/1‑148 (MQ=255)

                                                                                                               tttGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTg                                      <  2:1720300/148‑1 (MQ=255)

                                                                                                                    gtTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAAt                                 >  2:874606/1‑148 (MQ=255)

                                                                                                                     tttttACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATc                                <  2:1063197/148‑1 (MQ=255)

                                                                                                                         tACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGaa                            <  2:750926/148‑1 (MQ=255)

                                                                                                                          aCTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAAt                           <  2:1476008/148‑1 (MQ=255)

                                                                                                                            tCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAg                         >  2:2640586/1‑148 (MQ=255)

                                                                                                                            tCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAg                         <  1:2673496/148‑1 (MQ=255)

                                                                                                                               cTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTc                      >  1:2707978/1‑148 (MQ=255)

                                                                                                                                tATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTcc                     >  2:2969734/1‑148 (MQ=255)

                                                                                                                                 aTGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCg                    >  2:1297680/1‑148 (MQ=255)

                                                                                                                                  tGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGc                   >  2:1058152/1‑148 (MQ=255)

                                                                                                                                       attTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAat              <  1:408543/148‑1 (MQ=255)

                                                                                                                                           tttACCAATCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAatatat          <  2:1593320/148‑1 (MQ=255)

                                                                                                                                           tttACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAatatat          <  1:1353656/148‑1 (MQ=255)

                                                                                                                                           tttACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAatatat          <  1:805695/148‑1 (MQ=255)

                                                                                                                                               ccAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAATATATaaaa      <  2:708317/148‑1 (MQ=255)

                                                                                                                                                cAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAATATATAAAag     <  2:2779671/148‑1 (MQ=255)

                                                                                                                                                 aaCCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAATATATAAAaga    >  1:2419858/1‑148 (MQ=255)

                                                                                                                                                   cccTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAATATATAAAAGAgg  >  2:720962/1‑148 (MQ=255)

TGCTAATCTTAATAAAATACAATATCGAAACCCATAGCAAATAATGATTCAACAACGCAACCCATTAATAATTTGCATATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAATATATAAAAGAGG  >  CP009273/2379261‑2379555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`