Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 235,006 G→T 13.9% T73K (ACG→AAG) ‡ ykfM ← lethality reduction protein, putative inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273235,0060GT13.9% 419.4 / 14.2 198T73K (ACG→AAG) ‡ykfMlethality reduction protein, putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base G (103/59);  new base T (5/31);  total (108/90)
Fisher's exact test for biased strand distribution p-value = 4.99e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 210 total aligned reads displayed.

TTAGTATTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCA  >  CP009273/234859‑235149
                                                                                                                                                   |                                                                                                                                               
ttAGTATTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCg                                                                                                                                                 >  1:1046560/1‑148 (MQ=255)
    tATTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCgtaag                                                                                                                                             >  2:1849625/1‑148 (MQ=255)
     aTTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCttaagt                                                                                                                                            >  2:611507/1‑148 (MQ=255)
     aTTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCgtaagt                                                                                                                                            >  2:1773372/1‑148 (MQ=255)
     aTTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCgtaagt                                                                                                                                            >  2:611552/1‑148 (MQ=255)
     aTTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCgtaagt                                                                                                                                            >  2:2558832/1‑148 (MQ=255)
      ttGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTGTTTTTGTTTAATAATTATTTTTTTATagtaagta                                                                                                                                           >  1:369279/1‑148 (MQ=255)
       tGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCgtaagtaa                                                                                                                                          <  2:3238503/148‑1 (MQ=255)
       tGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCgtaagtaa                                                                                                                                          >  2:686103/1‑148 (MQ=255)
        gACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGAAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTaaa                                                                                                                                         <  2:1405843/148‑1 (MQ=255)
         aCATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATGATTTTATTATAGTAATTaaaa                                                                                                                                        >  1:630131/1‑148 (MQ=255)
         aCATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTaaaa                                                                                                                                        >  2:2154005/1‑148 (MQ=255)
         aCATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTaaaa                                                                                                                                        <  2:1665255/148‑1 (MQ=255)
         aCATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTaaaa                                                                                                                                        <  1:2301931/148‑1 (MQ=255)
          cATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATGATTTTATTATAGTAAGTAAAAt                                                                                                                                       >  2:2524784/1‑148 (MQ=255)
           atatCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTTTCGTAAGTTAAAtt                                                                                                                                      >  1:1320245/1‑148 (MQ=255)
            tatCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTa                                                                                                                                     <  2:460429/148‑1 (MQ=255)
             atCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAc                                                                                                                                    <  2:2143936/148‑1 (MQ=255)
             atCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAc                                                                                                                                    <  2:1221166/148‑1 (MQ=255)
               ccTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACAt                                                                                                                                  >  2:538941/1‑148 (MQ=255)
               ccTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACAt                                                                                                                                  >  2:1549400/1‑148 (MQ=255)
                 tgtgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAATGATTTTATTATCTTAATTAAAATTACATGa                                                                                                                                >  2:443938/1‑148 (MQ=255)
                   tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAATTATTTTATTTTAGTAATTAAAATTAAAAGAat                                                                                                                              >  1:405077/1‑148 (MQ=255)
                    gACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAata                                                                                                                             <  1:1933863/148‑1 (MQ=255)
                     aCAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAatat                                                                                                                            <  2:117578/148‑1 (MQ=255)
                          aGGAGCTATAAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATATTATTATAGTAAATAAAAATAAATGAAAATTTaaa                                                                                                                       >  2:874989/1‑148 (MQ=255)
                            gAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTGTTTTTGATTAAGAATTATTTTATTATAGTAATTAAAAATAAATGAATAATTaaaaa                                                                                                                     >  1:1148320/1‑148 (MQ=255)
                              gCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTTTTAATAATTATTTTATTATAGTAAGTAAAATTAAAATAATAATTaaaaaat                                                                                                                   >  1:1184600/1‑146 (MQ=255)
                               cTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACAACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAAATGAATATTTAAAAATGa                                                                                                                  >  2:228805/1‑148 (MQ=255)
                                tATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaa                                                                                                                 <  1:188391/148‑1 (MQ=255)
                                 aTTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaaa                                                                                                                <  1:1629864/148‑1 (MQ=255)
                                 aTTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaaa                                                                                                                <  1:2087718/148‑1 (MQ=255)
                                 aTTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaaa                                                                                                                <  1:967448/148‑1 (MQ=255)
                                 aTTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaaa                                                                                                                >  2:3286497/1‑148 (MQ=255)
                                  ttAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaaaa                                                                                                               <  1:2902895/148‑1 (MQ=255)
                                    aaaGGTGCTATTACGATAGATATTAGTAAAAATATAAGAGTTAGCTGTTTTGTTATGTCTGTGGCGAAATTTACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACg                                                                                                             <  2:2163992/148‑1 (MQ=255)
                                      aGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTTTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGAc                                                                                                           <  2:2670228/148‑1 (MQ=255)
                                      aGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGAc                                                                                                           >  1:1589011/1‑148 (MQ=255)
                                                aCGTTAGATATTTTTAAAATTATATGTTTTAGCTTTTTTTTTTTGTGTGTGGCTAATTTGACTACCTTCGTTTTTTTTTTTAAGATTTATTTTATTTTCTTAATTAAAATTAAATTAATATTTAAAATGTAAAACGACATGAAACCGa                                                                                                 <  2:636145/148‑1 (MQ=255)
                                                   aTAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTTTTAAGAATTATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGTAAAACGACATGAAAACGaacc                                                                                              >  1:2955774/1‑146 (MQ=255)
                                                    tAGATATTTTTAAAAATATATGTGTTAGCTTTTTTGTTTTGTGTGTGGCTAATTTTACTACATTCTTTTTTTTTATTAAGAATTTTTTTTTTATCTTATTTAAAATTAAATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGca                                                                                             <  1:532801/148‑1 (MQ=255)
                                                    tAGATATTATTAAAAATATAAGTTTTAGGTGTATTTTTATGTCTGTGGCTAAATTGACTACCTTCTTTTTTTTTATTAAGAATGATTTTATTTTCGTATTTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGca                                                                                             <  2:1194679/148‑1 (MQ=255)
                                                     ttatattatTAAAAATATAAGTTTTAGTTTTTTTTTTATGTCTGTGGCTAATTTGACTACCTTCTTTTTTTTGATTAACAATTTTTTTATTATCTTAATAAAATTTAAATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGcac                                                                                            <  1:1049624/145‑1 (MQ=255)
                                                     aGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGcac                                                                                            >  2:1710613/1‑148 (MQ=255)
                                                       cTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAAAGACATGAAAACGAAGCACAg                                                                                          >  2:3221378/1‑148 (MQ=255)
                                                       attttattaAAAATTTATGTTTTTGCTTTTTTTTTATTTGTGTGGCTAAATTGACTACCTTCGTTTTTTTGATAAATATTTTTTTTTTTATCTTAATTAAAATTAATTGAATATTTAAAAAGCAAAACGACATGAAACCGAAGCACAg                                                                                          <  2:1184600/145‑1 (MQ=255)
                                                         aTTAGTAAAAATATAATATTTAGCTTTTTTTTTATGTATGTGGATAAATTGACTACCTTCTTTTTTTTTATTAAGAATTATTTTATTATCGTAATTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGaa                                                                                        <  2:1292111/148‑1 (MQ=255)
                                                          ttAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAATTATTTTATTATCGTAAGTAAAAATAAATTAATATTTAAAAATGAAAACGACATTAAACCGAAGCACACAAt                                                                                       >  1:2894342/1‑148 (MQ=255)
                                                          ttAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAAt                                                                                       >  2:2196448/1‑148 (MQ=255)
                                                            ataaaataTATATGTTTTAGTTTTATTTTTTTTTGTTTGGCAAAATTTAATAATTTATTTTTTTTTATTAATAATTATTTTTTTATCTTATTTAAATTAAAATTATTATTTAAAAAGGAACACGACATGAAACCGAAGCACAGAATCa                                                                                     <  1:2563169/145‑1 (MQ=255)
                                                              tAAAAATATAAGTTTTAGCTTTATTGTTATGTCTGTGGCGAATTTGACTACCTTCTTTTTTTTTATTAATAATGTTTTTATTATCGTAATTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAAc                                                                                   <  2:1239997/148‑1 (MQ=255)
                                                              tAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTTTTAATAATTATTTTATTATAGTTAATAAAATTAAATTAAAATTTAAAAAATAAAAAGACATTAAAACCAAACACAGAAACaaa                                                                                   >  1:3090046/1‑147 (MQ=255)
                                                               aaaaaTATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACa                                                                                  >  2:546716/1‑148 (MQ=255)
                                                                        agagTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATGATTTTATTATAGTAAGTAAAATTAAAAGAATATTTAAAAAGTTAAAAGACATTAAAACGAAGCACAGAATAAACAATATCCAAt                                                                         >  1:2042760/1‑148 (MQ=255)
                                                                           gTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAAACGAAGCACAGAAACAACATTCTCCAATCAt                                                                      >  2:762703/1‑148 (MQ=255)
                                                                            ttAGCTTTTTTTTTTTGTCTGTGGCTAAATTGACTACCTTCTTTTTTTTGATTAAGAATGATTTTATTATCTTAAGTAAATTTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATa                                                                     <  2:2332135/148‑1 (MQ=255)
                                                                               gCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATAGTAAGTAAAATTAAATGAAAATTTAAAAAGGAAAAACAAATGAAAACGAAGCACACAATCAACATTCTCCAAACATaaaa                                                                  >  2:2801086/1‑148 (MQ=255)
                                                                                ctttATTGTTATGTCTGTGGCTAAATTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAat                                                                 <  2:509383/145‑1 (MQ=255)
                                                                                cTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAat                                                                 >  2:2984605/1‑148 (MQ=255)
                                                                                  gTATTTTTATTTCTGGGGCGAAATTGACTACATTCTTTTTTTTGATTAATAATTATTTTATTATGTTAATAAAAATTAAATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAatat                                                               <  2:2353323/148‑1 (MQ=255)
                                                                                    aTTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATTATTTTTTTATAGTAAGTAAAATTAAATGAATATTTAAAAAGGTAAACGACATGAAAACGAAGCACAGAATAAAAAATATACAATAAAAAAATAatt                                                             >  1:2864215/1‑148 (MQ=255)
                                                                                     ttGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATGATTTTATTATCGTAAGTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTc                                                            <  2:3288250/148‑1 (MQ=255)
                                                                                          aTGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGAATAAGAATGATTTTAATATCGTAAGTAAAATTACAAGAAAATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACAATCTCCAAACATAAAAAATTTCCGTgg                                                       >  2:201535/1‑148 (MQ=255)
                                                                                            gTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGTAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTGCGTGGAg                                                     >  2:2363988/1‑148 (MQ=255)
                                                                                            gTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAAAGACATGAAAACGAAGCACAGAATCAACATTATCCAATAATAAAAAATTTACGTGGAg                                                     >  2:2577111/1‑148 (MQ=255)
                                                                                                  ggCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCAtttt                                               >  2:1112720/1‑148 (MQ=255)
                                                                                                   gctaatttGACTCCGTTGTTTTTTTTTATTAATATTTATTTTTTTATCTTAATAAAATTTAAATGAATATTTAAAAAGAAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTtta                                              <  1:928360/142‑1 (MQ=255)
                                                                                                     taaaTTGACTACCTTCTTTTTTTTTATTAACAATTATTTTATTATCGTATGTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTttatt                                            <  2:2047474/147‑1 (MQ=255)
                                                                                                     caaaTTGACTACCTTCGTTTTTTTGATTAATAATGATTTTATCATCGTAAGAAAAATTAAATGAATATTTAAAAAGTAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTttatt                                            <  1:3264528/147‑1 (MQ=255)
                                                                                                        aTTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGGCCTGAAACCGAAGCACAGAATCAACCTTCTGCAATAATAAAATAGTTCGGTGGAGGATTtgattgtg                                         >  2:1783645/1‑145 (MQ=255)
                                                                                                         ttcacaaCCTTCTTTTTTTTGATTAACAATTTTTTTATTATCTTAATAAAAATTAAATGAATATTAAAAAAGCAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTg                                        <  1:179154/142‑1 (MQ=255)
                                                                                                         ttGACTACCTTCTTTTTTTTGATTAAGAATTATTTTATTATCTTAATTAAAATTAAATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTg                                        <  1:1849625/148‑1 (MQ=255)
                                                                                                           tagtACCTTCTTTTTTTTTTTTATGATTTTTTTTTTTATCTTAATTAAATTTACATTAATTTTTAAAATGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGaa                                      <  1:1635846/145‑1 (MQ=255)
                                                                                                           tacaaCCTTCTTTTTTTTTATTAATAATTATTTTATTATCTTAATTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGaa                                      <  2:405077/144‑1 (MQ=255)
                                                                                                              tACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCTTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAatat                                   <  2:1474800/148‑1 (MQ=255)
                                                                                                              tACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTATCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAatat                                   >  2:1293520/1‑148 (MQ=255)
                                                                                                                ccTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAAATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATag                                 >  2:695392/1‑148 (MQ=255)
                                                                                                                    ttttttttttATTAATAATTTTTTTATTATATTAATTAAAATTAAATTAATATTAAAAAAGAAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGt                             <  1:597314/146‑1 (MQ=255)
                                                                                                                    cGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTACGTGGAGCATTTTATTATTGAATATAGAGGt                             >  1:3145797/1‑148 (MQ=255)
                                                                                                                    cGTTTTTTTGATTAACAATGATTTTATTATCGTAATAAAAATTACATGAATATTAAAAAAGCAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGt                             <  1:1200418/148‑1 (MQ=255)
                                                                                                                       ttttttGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTa                          >  1:429347/1‑148 (MQ=255)
                                                                                                                         ttttTATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAAc                        <  2:2422131/148‑1 (MQ=255)
                                                                                                                             taTTAATATTTATTTTATTATCTTAATTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCg                    <  1:2483328/147‑1 (MQ=255)
                                                                                                                             gATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCg                    >  1:1212280/1‑148 (MQ=255)
                                                                                                                               ttAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGt                  >  1:860876/1‑148 (MQ=255)
                                                                                                                                   gAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTaaaa              >  1:2644215/1‑148 (MQ=255)
                                                                                                                                    aaTGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTaaaaa             >  2:3073247/1‑148 (MQ=255)
                                                                                                                                    aaTGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTaaaaa             >  1:2411088/1‑148 (MQ=255)
                                                                                                                                      tGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAAc           >  2:2126556/1‑148 (MQ=255)
                                                                                                                                        aTTTTATTATCTTAATTAAAATTAAATTAATATTAAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACaa         <  1:2135098/148‑1 (MQ=255)
                                                                                                                                        aTTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACaa         >  2:434052/1‑148 (MQ=255)
                                                                                                                                         ttttATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACaaa        >  1:1015431/1‑148 (MQ=255)
                                                                                                                                         ttttATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACaaa        >  2:2657524/1‑148 (MQ=255)
                                                                                                                                          tttATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaag       >  1:3206780/1‑148 (MQ=255)
                                                                                                                                            tattatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaagaa     <  2:3017227/148‑1 (MQ=255)
                                                                                                                                             attatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaagaag    >  1:445299/1‑148 (MQ=255)
                                                                                                                                             attatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaagaag    >  1:1405165/1‑148 (MQ=255)
                                                                                                                                              ttatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTATAAAACAAAGAAGc   >  2:3245574/1‑148 (MQ=255)
                                                                                                                                               tatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCa  >  1:2728054/1‑148 (MQ=255)
                                                                                                                                               tatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCa  >  1:672253/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                               
TTAGTATTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCA  >  CP009273/234859‑235149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: