Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 235,010 G→T 23.2% L72I (CTT→ATT)  ykfM ← lethality reduction protein, putative inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273235,0100GT23.2% 317.5 / 23.5 198L72I (CTT→ATT) ykfMlethality reduction protein, putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base G (92/52);  new base T (14/38);  total (108/90)
Fisher's exact test for biased strand distribution p-value = 8.02e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 213 total aligned reads displayed.

TATTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGC  >  CP009273/234863‑235157
                                                                                                                                                   |                                                                                                                                                   
tATTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCgtaag                                                                                                                                                     >  2:179154/1‑148 (MQ=255)
 aTTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCttaagt                                                                                                                                                    >  2:611507/1‑148 (MQ=255)
 aTTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCgtaagt                                                                                                                                                    >  2:611552/1‑148 (MQ=255)
 aTTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCgtaagt                                                                                                                                                    >  2:2558832/1‑148 (MQ=255)
  ttGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTGTTTTTGTTTAATAATTATTTTTTTATagtaagta                                                                                                                                                   >  1:369279/1‑148 (MQ=255)
   tGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCgtaagtaa                                                                                                                                                  >  2:686103/1‑148 (MQ=255)
    gACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGAAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTaaa                                                                                                                                                 <  2:1405843/148‑1 (MQ=255)
     aCATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATGATTTTATTATAGTAATTaaaa                                                                                                                                                >  1:630131/1‑148 (MQ=255)
     aCATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTaaaa                                                                                                                                                >  2:2154005/1‑148 (MQ=255)
     aCATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTaaaa                                                                                                                                                <  1:2301931/148‑1 (MQ=255)
      cATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATGATTTTATTATAGTAAGTAAAAt                                                                                                                                               >  2:2524784/1‑148 (MQ=255)
        tatCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTa                                                                                                                                             <  2:460429/148‑1 (MQ=255)
         atCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAc                                                                                                                                            <  2:2143936/148‑1 (MQ=255)
            cTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAATTAAAATTAAATg                                                                                                                                         >  2:1227191/1‑148 (MQ=255)
             tgtgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAATGATTTTATTATCTTAATTAAAATTACATGa                                                                                                                                        >  2:443938/1‑148 (MQ=255)
              gtgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATTATTTTTTTATATTAAGTAAAATTAAATGaa                                                                                                                                       >  1:1684802/1‑148 (MQ=255)
              gtgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGaa                                                                                                                                       <  2:3175494/148‑1 (MQ=255)
               tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAATTATTTTATTTTAGTAATTAAAATTAAAAGAat                                                                                                                                      >  1:405077/1‑148 (MQ=255)
               tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAat                                                                                                                                      >  1:1836968/1‑148 (MQ=255)
               tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAat                                                                                                                                      <  2:1240538/148‑1 (MQ=255)
                 aCAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAatat                                                                                                                                    <  2:117578/148‑1 (MQ=255)
                      aGGAGCTATAAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATATTATTATAGTAAATAAAAATAAATGAAAATTTaaa                                                                                                                               >  2:874989/1‑148 (MQ=255)
                          gCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTTATAATTATTTTATTATCTTAATTAAAAATAAATTAAAATTTaaaaatt                                                                                                                           >  1:1975301/1‑146 (MQ=255)
                          gCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAATAAATATTTTTTTATAGTAATTAAAATTAAAAGAATATTTaaaaatt                                                                                                                           >  1:1184612/1‑146 (MQ=255)
                           cTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACAACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAAATGAATATTTAAAAATGa                                                                                                                          >  2:228805/1‑148 (MQ=255)
                             aTTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaaa                                                                                                                        <  1:967448/148‑1 (MQ=255)
                             aTTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaaa                                                                                                                        <  1:2087718/148‑1 (MQ=255)
                              ttAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAATGaaaa                                                                                                                       >  2:5412/1‑148 (MQ=255)
                              ttAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaaaa                                                                                                                       <  1:2902895/148‑1 (MQ=255)
                                aaaGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAATTAAAATTAAATGAATATTTAAAAATGAAAACg                                                                                                                     >  2:1957198/1‑148 (MQ=255)
                                aaaGGTGCTATTACGATAGATATTAGTAAAAATATAAGAGTTAGCTGTTTTGTTATGTCTGTGGCGAAATTTACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACg                                                                                                                     <  2:2163992/148‑1 (MQ=255)
                                  aGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTTTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGAc                                                                                                                   <  2:2670228/148‑1 (MQ=255)
                                  aGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAATTAAAATTACATGAATATTTAAAAAGGAAAACGAc                                                                                                                   >  1:1369021/1‑148 (MQ=255)
                                  aGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGAc                                                                                                                   >  1:1589011/1‑148 (MQ=255)
                                   ggTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATTATTTTATTATAGTAAGTAAAATTAAATGTATATTTAAAAATGAAAACGACa                                                                                                                  >  1:1049254/1‑148 (MQ=255)
                                   ggTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTAAAAGAATATTTAAAAATGAAAAAGaaa                                                                                                                  >  1:1050853/1‑146 (MQ=255)
                                   ggTGATATTACGATAGCTATTTTTAAAAATATAATATTTAGGTTTATTGTTATGTGTGTGGCTAATTTGAATACCTTCTTTTTTTTGATTAATAATTATTTTATTATCGTATGTAAAATTAAATGAATATTTAAAAAGGAAAACGACa                                                                                                                  <  2:1200994/148‑1 (MQ=255)
                                            aCGTTAGATATTTTTAAAATTATATGTTTTAGCTTTTTTTTTTTGTGTGTGGCTAATTTGACTACCTTCGTTTTTTTTTTTAAGATTTATTTTATTTTCTTAATTAAAATTAAATTAATATTTAAAATGTAAAACGACATGAAACCGa                                                                                                         <  2:636145/148‑1 (MQ=255)
                                               aTAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTTTTAAGAATTATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGTAAAACGACATGAAAACGaacc                                                                                                      >  1:2955774/1‑146 (MQ=255)
                                                tAGATATTTTTAAAAATATATGTGTTAGCTTTTTTGTTTTGTGTGTGGCTAATTTTACTACATTCTTTTTTTTTATTAAGAATTTTTTTTTTATCTTATTTAAAATTAAATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGca                                                                                                     <  1:532801/148‑1 (MQ=255)
                                                   cTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAATTAAAATTACATGAATATTTAAAAATGAAAAAGAAATGAAACCGAAGCACAg                                                                                                  >  2:1581042/1‑148 (MQ=255)
                                                   attttattaAAAATTTATGTTTTTGCTTTTTTTTTATTTGTGTGGCTAAATTGACTACCTTCGTTTTTTTGATAAATATTTTTTTTTTTATCTTAATTAAAATTAATTGAATATTTAAAAAGCAAAACGACATGAAACCGAAGCACAg                                                                                                  <  2:1184600/145‑1 (MQ=255)
                                                     aTTAGTAAAAATATAATATTTAGCTTTTTTTTTATGTATGTGGATAAATTGACTACCTTCTTTTTTTTTATTAAGAATTATTTTATTATCGTAATTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGaa                                                                                                <  2:1292111/148‑1 (MQ=255)
                                                      ttAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAATTATTTTATTATCGTAAGTAAAAATAAATTAATATTTAAAAATGAAAACGACATTAAACCGAAGCACACAAt                                                                                               >  1:2894342/1‑148 (MQ=255)
                                                      ttAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAAt                                                                                               >  2:2196448/1‑148 (MQ=255)
                                                          tAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTTTTAATAATTATTTTATTATAGTTAATAAAATTAAATTAAAATTTAAAAAATAAAAAGACATTAAAACCAAACACAGAAACaaa                                                                                           >  1:3090046/1‑147 (MQ=255)
                                                          tAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATCGTAAGTAAAATTAAATTAAAATTTAAAAATTAAAACGACAAGAAAACGAAGCACAGAATaaaa                                                                                           >  1:1600551/1‑147 (MQ=255)
                                                               atatAAGATTTAGCTTTATTGTTATGTCTGGGGCTAAATTGAGTACATTCGTTTTTTTGATTAAGATTGATTTTATTATCTTAATTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATtct                                                                                      <  2:1741660/148‑1 (MQ=255)
                                                                    agtgTTAGCTTTTTTGTTATGTCTGTGGCTAAATTTACTCCCTTCGTTTTTTTGATTAAGATTTATTTTATTATCGTAAGTAAAATTACATGAATATTAAAAAAGCAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAAt                                                                                 <  1:1632718/145‑1 (MQ=255)
                                                                       gTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAAACGAAGCACAGAAACAACATTCTCCAATCAt                                                                              >  2:762703/1‑148 (MQ=255)
                                                                        ttAGCTTTTTTTTTTTGTCTGTGGCTAAATTGACTACCTTCTTTTTTTTGATTAAGAATGATTTTATTATCTTAAGTAAATTTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATa                                                                             <  2:2332135/148‑1 (MQ=255)
                                                                         tAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAATTATTTTTTTATAGTAATTAAAATTAAATGAATATTTAAAAAGGAAAAAGACATGAAAACCAAGCAAAGAATAAACATTAAACAAtaataa                                                                            >  1:2662884/1‑148 (MQ=255)
                                                                            cTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCTTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAat                                                                         <  2:509079/148‑1 (MQ=255)
                                                                            cTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAat                                                                         >  2:2984605/1‑148 (MQ=255)
                                                                              gTATTTTTATTTCTGGGGCGAAATTGACTACATTCTTTTTTTTGATTAATAATTATTTTATTATGTTAATAAAAATTAAATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAatat                                                                       <  2:2353323/148‑1 (MQ=255)
                                                                              gTATTTTTATGTTTGTGGCGAAATTGACTACATTCGTTTTTTTGATTAATATTGATTTTATTATCGTAAGTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAatat                                                                       <  2:538429/148‑1 (MQ=255)
                                                                               tATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGCATATTTAAAAAGGAAAAAGACATGAAACCGAAGCACAGAATCAACAATCTCCAATAATAAAATAtt                                                                      >  2:1699258/1‑148 (MQ=255)
                                                                                tttGTTTTTTCTGTGGCTAATTTGAATACCTTCTATTTTTTGATTAATATTTATTTTATTTTCGTATTTAAATTTAATTTAATATTTAAAAATTAAAACGACATGAAACCGAAGCACTTAATCTACATTCTCCAATCATAAAATAttt                                                                     <  2:3254845/147‑1 (MQ=255)
                                                                                aTTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATTATTTTTTTATAGTAAGTAAAATTAAATGAATATTTAAAAAGGTAAACGACATGAAAACGAAGCACAGAATAAAAAATATACAATAAAAAAATAatt                                                                     >  1:2864215/1‑148 (MQ=255)
                                                                                 ttGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATGATTTTATTATCGTAAGTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTc                                                                    <  2:3288250/148‑1 (MQ=255)
                                                                                      ttttgtgtgGCTAATTTTACTACCTTCTTTTTTTTTATTAAGATTTATTTTATTATCTTAATTAAATTTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTgg                                                               <  1:1874522/143‑1 (MQ=255)
                                                                                      aTGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGAATAAGAATGATTTTAATATCGTAAGTAAAATTACAAGAAAATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACAATCTCCAAACATAAAAAATTTCCGTgg                                                               >  2:201535/1‑148 (MQ=255)
                                                                                        gTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATTATTTTATTATAGTAAGTAAAATTAAATGAATATTTAAAAAGGAAAACGACAAGAAAACCAAGCACACAAAAAAAAATATCCAAAAATAAAATATTTACGTGGAg                                                             >  1:997188/1‑148 (MQ=255)
                                                                                        gTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGTAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTGCGTGGAg                                                             >  2:2363988/1‑148 (MQ=255)
                                                                                        gTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAAAGACATGAAAACGAAGCACAGAATCAACATTATCCAATAATAAAAAATTTACGTGGAg                                                             >  2:2577111/1‑148 (MQ=255)
                                                                                         tCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGAAATGAAAACGAAGCACAGAATCAACATTCTCCAATCAAAAAATATTTCAGTGGTGc                                                            >  1:1892654/1‑148 (MQ=255)
                                                                                              ggCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCAtttt                                                       >  2:1112720/1‑148 (MQ=255)
                                                                                               gctaatttGACTCCGTTGTTTTTTTTTATTAATATTTATTTTTTTATCTTAATAAAATTTAAATGAATATTTAAAAAGAAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTtta                                                      <  1:928360/142‑1 (MQ=255)
                                                                                               gCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTtta                                                      >  2:1778972/1‑148 (MQ=255)
                                                                                                 caaaTTGACTACCTTCGTTTTTTTGATTAATAATGATTTTATCATCGTAAGAAAAATTAAATGAATATTTAAAAAGTAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTttatt                                                    <  1:3264528/147‑1 (MQ=255)
                                                                                                       tacaaCCTTCTTTTTTTTTATTAATAATTATTTTATTATCTTAATTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGaa                                              <  2:405077/144‑1 (MQ=255)
                                                                                                        aCTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATTAATATTAAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAat                                             <  1:261300/148‑1 (MQ=255)
                                                                                                          tACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCTTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAatat                                           <  2:1474800/148‑1 (MQ=255)
                                                                                                          tACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTATCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAatat                                           >  2:1293520/1‑148 (MQ=255)
                                                                                                            ccTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAAATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATag                                         >  2:695392/1‑148 (MQ=255)
                                                                                                               tcttttttttGATTAAAAATTATTTTTTAACCTTACTAAAAATTAATTTAATATTAAAAAAGCAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAgg                                      <  1:3149387/145‑1 (MQ=255)
                                                                                                               tCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAgg                                      <  2:2876622/148‑1 (MQ=255)
                                                                                                               tCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAgg                                      >  2:323277/1‑148 (MQ=255)
                                                                                                                ttttttttttATTAATAATTTTTTTATTATATTAATTAAAATTAAATTAATATTAAAAAAGAAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGt                                     <  1:597314/146‑1 (MQ=255)
                                                                                                                   ttttttTATTAATATTTATTTTATTATATTAATAAAAATTAAATTAATATTAAAAAAGCAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTa                                  <  1:312221/148‑1 (MQ=255)
                                                                                                                   ttttttGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTa                                  >  1:429347/1‑148 (MQ=255)
                                                                                                                     ttttTATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAAc                                <  2:2422131/148‑1 (MQ=255)
                                                                                                                      tttGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTTAATATAGAGGTTTAACt                               >  1:1167795/1‑148 (MQ=255)
                                                                                                                         taTTAATAATGATTTTATTATCTTAATTAAAATTAAATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCg                            <  1:2483316/147‑1 (MQ=255)
                                                                                                                         gATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCg                            >  1:1213371/1‑148 (MQ=255)
                                                                                                                         gATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCg                            >  1:1212155/1‑148 (MQ=255)
                                                                                                                           ttAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGt                          >  1:2516739/1‑148 (MQ=255)
                                                                                                                           ttAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGt                          >  1:860876/1‑148 (MQ=255)
                                                                                                                                aaTGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTaaaaa                     >  2:3072934/1‑148 (MQ=255)
                                                                                                                                  tGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAAc                   >  1:2390139/1‑148 (MQ=255)
                                                                                                                                  tGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAAc                   >  2:2126556/1‑148 (MQ=255)
                                                                                                                                    aTTTTATTATCTTAATTAAAATTAAATTAATATTAAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACaa                 <  1:2135098/148‑1 (MQ=255)
                                                                                                                                    aTTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACaa                 >  2:434052/1‑148 (MQ=255)
                                                                                                                                     ttttATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACaaa                >  2:2657524/1‑148 (MQ=255)
                                                                                                                                     ttttATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACaaa                >  1:1015431/1‑148 (MQ=255)
                                                                                                                                        tattatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaagaa             <  2:3017227/148‑1 (MQ=255)
                                                                                                                                         attatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaagaag            >  1:445299/1‑148 (MQ=255)
                                                                                                                                           tatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCa          <  2:3242468/148‑1 (MQ=255)
                                                                                                                                           tatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCa          >  1:672253/1‑148 (MQ=255)
                                                                                                                                                taagtaaAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGaa     <  2:2042014/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TATTGACATATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGC  >  CP009273/234863‑235157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: