| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,835,291 | T→G | 16.4% | C315G (TGC→GGC) | ascB → | cryptic 6‑phospho‑beta‑glucosidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,835,291 | 0 | T | G | 16.4% | 326.4 / 8.3 | 175 | C315G (TGC→GGC) | ascB | cryptic 6‑phospho‑beta‑glucosidase |
| Reads supporting (aligned to +/- strand): ref base T (62/78); new base G (30/4); total (93/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.21e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 181 total aligned reads displayed.
ATCGATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGATCGTT > CP009273/2835144‑2835438 | aTCGATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCt < 1:1074232/148‑1 (MQ=255) tCGATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTATTTCAGAGATTTAGCCTCGCGCTg > 1:1809574/1‑148 (MQ=255) cGATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTTTATATTTAAGCTATTTAGCCTCGCGCTgc > 1:1107120/1‑148 (MQ=255) cGATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCTTTCAGCTATTAAGCCTCGCGCTgc > 1:2758776/1‑148 (MQ=255) aTGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTTTCTTTAAGATATTAAGCCTCGCGGTgcgc > 1:2145781/1‑148 (MQ=255) gcgcGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTGTCTTTGAGCTATTACGCCGCGCGCGGCGCCTcggcgg > 1:1662551/1‑148 (MQ=255) gcgcGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCGGCGCCTcggcgg > 2:2806147/1‑148 (MQ=255) gcgcGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCGATTAAGCCTCGCGCGGCGCCTcggcgg > 1:1854996/1‑148 (MQ=255) gcgcGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTATCTTTCAGCTATTACGCCGCGCGCGGCGCCGccgcgg > 1:1662767/1‑148 (MQ=255) gcgcGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTTTCTATTTAAGCTATTAAGCCACGCGCGGCGCCGcggcgg > 1:146542/1‑148 (MQ=255) gcgGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGgag < 2:193005/148‑1 (MQ=255) cgGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGgaga < 1:1180721/148‑1 (MQ=255) ggggCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGAt < 2:3063063/148‑1 (MQ=255) cGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCACGCGCTGCGCCGCGGCGGAGATGAACGc > 2:662529/1‑148 (MQ=255) tATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTTTCTCGTTGAGCTATTACGCCTCGCGCGGCGCCTCGGCGGAGATGTACGCca > 2:614374/1‑148 (MQ=255) tATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCTTTGAGCTATTAAGCCGCGCGCTGCGCCGCGGCGGCGATGAAAGCca > 2:614235/1‑148 (MQ=255) tCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTTTGTCTTTCAGCAAATAAGCCTCGCGCGGCGCCACGGCGGAGCTGAACGCcaac > 1:2210776/1‑148 (MQ=255) tCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTAAGCCGCGCGCTGCGCCACGGCGGAGATGAACGCcaac > 2:2866873/1‑148 (MQ=255) tCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCcaac > 2:2031519/1‑148 (MQ=255) tCCGGCTTACTCTGCCCGCGTATTCCGAGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTTTATCTTTCAGATATTAAGACACGCGCTGCGCCACTGCGGAGATTAACGCccac > 2:366282/1‑148 (MQ=255) ccGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTTTAAATTTGAGGTATTTCGCCGCCGGCGGCGCCGCGGGGGTGATGAACGCcaaca > 1:1562808/1‑148 (MQ=255) cGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTTTGTCTTTCAGCTATTAAGCCTCGCGCGGCGCCTCGGCGGAGATGACAGCcaacaa > 1:2349939/1‑148 (MQ=255) gCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTGTCTTTCAGCTATTAAGCCGCGCGCTGCGCCGCGGCGGAGATTAAAGCCAacaaca > 1:520938/1‑148 (MQ=255) cTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAAcag < 2:2018557/148‑1 (MQ=255) ttACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTGTCTTTAAGCTATTACGCCTCGCGCGGCGCCGCGGCGGAGATTAACCCCCacaacacc > 1:2909896/1‑146 (MQ=255) tACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAAcagca < 1:1910592/148‑1 (MQ=255) tACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAAcagca < 1:830284/148‑1 (MQ=255) ctGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCTTTGAGCGATTAAGCCGCGCGCGGCGCCTCGGCGGAGATGAAAGCCAACAACACCACTgc > 2:324694/1‑148 (MQ=255) cccGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTTTGTCTTTCAGCTATTACGCCACGCGCGGCGCCGCGGCGGGGATGAACGCCAACAACAGCAGTgcggc > 1:2207692/1‑148 (MQ=255) gcgTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGaa < 1:742850/148‑1 (MQ=255) gcgTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGaa < 1:2402876/148‑1 (MQ=255) tATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACgt < 1:2132842/148‑1 (MQ=255) tATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTGTCTTTAAGCGATTAACCCGCCCGCGGCGCCGCGGCGGGGGTGAACGCCCACAACACCCCTgcggcgcccgg > 1:888544/1‑143 (MQ=255) tATTCCGCGAAAAAGAGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACgg > 2:2056769/1‑147 (MQ=255) gcgAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGaa < 1:3095592/148‑1 (MQ=255) gAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAAt < 1:3105945/148‑1 (MQ=255) aaaaaGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCGTTCAGCTATTACGCCTCGCGCGGCCCCGCGGCGGAGATGAACGCCCACAACCGCAGTGCGGCGAACGGGGTGAAATc > 2:955315/1‑148 (MQ=255) aaaaGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCg < 1:250920/148‑1 (MQ=255) aaaaGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCg < 1:2785807/148‑1 (MQ=255) aaGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCGTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCt < 1:3045438/148‑1 (MQ=255) ggggTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTATCTTTCAGCTATTAACCCACGCGCGGCGCCGCGGCGGAGATGAACGCCCACAAAAGCAGTGCGGCGAACGGGGTGAAATCGCTGc > 1:817457/1‑148 (MQ=255) ggggTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTTTGTCTTTAAGCTATTAAGCCTCGCGCGGCGCCGCGGCGGAGATGTAAGCCCACAACAGCAGTGCGGCGAACCGGGTGTAATAGCTGc > 1:1003651/1‑148 (MQ=255) gggTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCg > 2:1337482/1‑148 (MQ=255) tAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTaa < 1:1817778/148‑1 (MQ=255) aaCCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAAt < 2:2260878/148‑1 (MQ=255) aaCCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAAt < 1:996295/148‑1 (MQ=255) ccATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTGTGTTTAAGCTAATACGCCGCGCGCTGCGCCTAGGCGGCGATTAACGCCCACAACGGCCTGGCGGCGAACGTGGTTAAATCGCAGCGGAATca > 2:174593/1‑147 (MQ=255) aTCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCGATTACGCCGCGCGCGGCGCCTCCGCGGAGATGAACGCCAACAACAGCAGTGCGGCTAACGTGGGGAAATCGCAGCGTAATCCGt > 1:1086168/1‑148 (MQ=255) tCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTa < 1:1361171/148‑1 (MQ=255) tCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTTTCTATTTGAGCTATTAAGCCGCGCGCTGCGCCACGGCGGCGCTGAACGCCCACAACAACACTGCGGCGAAAGTGGTGTAATAGCTGCGGAATACGTa > 1:100201/1‑148 (MQ=255) caacaaAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTAt < 1:199002/148‑1 (MQ=255) aGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAg < 1:2711627/148‑1 (MQ=255) aGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCGGCGCCGCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGGGGTGAAATCGCTGCGTAATCCGTATCTACAg > 2:1663425/1‑148 (MQ=255) aGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTATCTTTAAGCTATTACGCCTCGCGCTGCGCCGCGGCGGAGATTAACGCCAAAAAAAGCAGTGCGGCGAACCTGGTGAAATCGCTGCGTAATACGTATATACAg > 2:1405986/1‑148 (MQ=255) cACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCGGTTACGCCTCGCGCTGCGCCGCGGCGGAGATGAACGCCAACAACAGCCGGTCGGCGAACGGGGTGAAATCGCTGCGTAATCCGTATCTACAGGt > 2:1603237/1‑148 (MQ=255) ggCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCg < 2:905854/148‑1 (MQ=255) gCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGa < 1:2458622/148‑1 (MQ=255) cGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGAc < 2:1124541/148‑1 (MQ=255) tgatgaAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCTGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGActgg < 2:1274579/148‑1 (MQ=255) gatgaAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTAAGCCTCCCGCGGCGCCTCGGCGGCGATGAACGCCAACAAAAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTAAAGGTGAGCGGctggg > 1:268953/1‑148 (MQ=255) atgaAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGActgggg < 2:1378095/148‑1 (MQ=255) tgaAATCCTGAAAAACACCGTCGAGTTTGTCTCTTTGAGCTATTACGCCACGCGCGGCGCCGCGGCGGAGATGAACGCCCACAACAGCAGGGCGGCGAACGTGGTGAAATCGCGGCGGAATCCGTATCTACAGGGGAGCGCcgggggg > 2:1419527/1‑147 (MQ=255) aaaTCCTGAAAAACACCGTCGAGTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAAAGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGActggggctg > 2:484754/1‑148 (MQ=255) cTGAAAAACCCCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGaa < 1:1368463/148‑1 (MQ=255) tGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTCCGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACCGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAAt < 1:326966/148‑1 (MQ=255) gAAAAACACCGTCGATTTTTTGTCTTTAAGCTATTAAGCCTCGCGCTGCGCCTCGGGGGAGATGAACGCCAAAAACAGCAGTGCGGCGAACGGGGTGAAATAGCTGCGGAATCCGTATCTACAGGTGAGCGCCTGGGGGTGGGGGAtt > 2:1509891/1‑148 (MQ=255) acacCGTCGATTTTTTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACCTGGTGAAATAGCTGCGTAATCCCTATATACAGGTGAGCGACTGGGGCTGGGGaaattatac > 2:1758735/1‑141 (MQ=255) acCGTCGATTTTTTGGCTTTCAGCTATTAAGCCCCGCGCTGCGCCTCCGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATAGCTGCGTAAAACGTATCAACACGTGAGCGACTGGGGCTGGGGAAATGATacac > 2:2544012/1‑148 (MQ=255) ccGTCGAGTTTGTCTCTTTCAGCTATTAAGCCACGCGCTGCGCCACGGCGGAGATTAACCCCCACAAAAGCAGTGCGGCGAACGGGGTGAAAACGCTGCGTAATACGTAACTACACGTGAGCGACTGGGGGGGGGGACATGATACACt > 2:2005450/1‑148 (MQ=255) cGATTTTGACTCTTTCAGCTATTCCGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTTAAATCGCTGCTTAATCCTTATCTACAGGTGCGCGACTGGGGCTGGGGAATTGATCCACTCGGt < 1:686916/148‑1 (MQ=255) ttttGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTg > 2:736053/1‑148 (MQ=255) ttttGTCTCTTTCAGCTATGCCGCCTCGCGCGGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTg < 1:1471873/148‑1 (MQ=255) ttttGTCTCTTTCAGATATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCAAACAACAGCAGTGCGGCGAAGGTGGTGAAATCGCTGCTTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTg < 1:1471460/148‑1 (MQ=255) tttGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACCGGGGCTGGGGAATTGATCCACTCGGTCTGc > 2:1737054/1‑148 (MQ=255) tctcTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTAt > 1:1872159/1‑148 (MQ=255) tctcTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTAt < 1:559021/148‑1 (MQ=255) ctctTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATc > 1:579345/1‑148 (MQ=255) tctTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCa > 1:2371443/1‑148 (MQ=255) ctTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCAc > 2:1295706/1‑148 (MQ=255) tttCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCAcc > 1:2961384/1‑148 (MQ=255) ttCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACCGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCa < 1:1548373/148‑1 (MQ=255) ttCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCa > 1:2657860/1‑148 (MQ=255) ttCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCa > 2:2345947/1‑148 (MQ=255) ttttccgccgcGCGCGGCGCCTGGGCGGAGATGAACGCCAACAACAGCTGTGCGGCGAAGGTGTTTAAATCGCTGCTTAATCCGTAGATACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAata < 1:281943/143‑1 (MQ=255) tATTACGCCTCGCGCTGCGCCTCGGGGTAGTTGAACGCCAACAACAGCATTGCGGCGAACTTGGGTAAATCGCGGCGTATTCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTATGCGTATCACCATGAata < 1:174593/148‑1 (MQ=255) tATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAata > 2:1403242/1‑148 (MQ=255) aTTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAatat > 1:128735/1‑148 (MQ=255) ttACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATatg < 2:3181961/148‑1 (MQ=255) gCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGt < 1:3148434/148‑1 (MQ=255) gCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGt < 2:547711/148‑1 (MQ=255) ccTCGGGCTGCGCCTCGGCGGATATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTTAAATCGCTGCGTAATCCGTATCTACTGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTa < 1:324694/148‑1 (MQ=255) ccTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTa > 1:2467289/1‑148 (MQ=255) ccTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTa > 1:2467274/1‑148 (MQ=255) cTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTAc < 2:2481953/148‑1 (MQ=255) cgcgCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCTGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGa < 1:930153/148‑1 (MQ=255) cgcgCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGa > 1:1218163/1‑148 (MQ=255) tGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGATCGtt < 2:145960/148‑1 (MQ=255) tGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGATCGtt < 2:146542/148‑1 (MQ=255) tGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGATCGtt < 2:1854996/148‑1 (MQ=255) tGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGATCGtt < 2:1107120/148‑1 (MQ=255) | ATCGATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGATCGTT > CP009273/2835144‑2835438 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |