| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,330,426 | Δ1 bp | 100% | intergenic (‑88/+111) | adiA ← / ← melR | arginine decarboxylase/melibiose operon transcriptional regulator; autoregulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,330,426 | 0 | T | . | 100.0% | 1474.0 / NA | 271 | intergenic (‑88/+111) | adiA/melR | arginine decarboxylase/melibiose operon transcriptional regulator; autoregulator |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (111/160); total (111/160) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 294 total aligned reads displayed.
GGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGC > CP009273/4330279‑4330568 | ggCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAt < 2:2800078/148‑1 (MQ=255) cGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttt > 1:19589/1‑148 (MQ=255) cGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCAGTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCGTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttt < 2:3155405/148‑1 (MQ=255) tACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttga > 2:3633636/1‑146 (MQ=255) aCCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttgaa > 2:1254631/1‑145 (MQ=255) aCCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttgaa < 2:2603425/148‑4 (MQ=255) aCCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttgaa < 2:1479219/148‑4 (MQ=255) ccGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttgaaa < 1:3614467/148‑5 (MQ=255) ccGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttgaaa < 2:279232/148‑5 (MQ=255) aGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAg < 2:19589/148‑1 (MQ=255) aGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAg > 1:2584672/1‑148 (MQ=255) ggTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGt < 1:420829/148‑1 (MQ=255) ggTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGt < 1:793909/148‑1 (MQ=255) gtgtCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGtt > 2:120842/1‑148 (MQ=255) gtgtCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGtt < 1:2912282/148‑1 (MQ=255) gtgtCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGtt < 1:2758683/148‑1 (MQ=255) tCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTta > 1:923489/1‑148 (MQ=255) tCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTta > 2:1173864/1‑148 (MQ=255) cTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTtat > 2:3380209/1‑148 (MQ=255) ttGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTtata < 1:821322/148‑1 (MQ=255) tGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATaa < 2:1351099/148‑1 (MQ=255) tGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATaa < 2:26457/148‑1 (MQ=255) gATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATaaa < 1:1423501/148‑1 (MQ=255) aTGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAAc < 1:3116177/148‑1 (MQ=255) agaAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATa < 2:1433864/148‑1 (MQ=255) agaAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATa > 2:1109032/1‑148 (MQ=255) gaAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATAc > 1:803196/1‑148 (MQ=255) gaAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATAc > 1:803182/1‑148 (MQ=255) gaAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATAc < 2:2087652/148‑1 (MQ=255) gaAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATAc > 1:3415947/1‑148 (MQ=255) aCTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGtt < 1:3285718/148‑1 (MQ=255) tCGCTTTCAAAAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGAGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAt < 2:2536064/148‑1 (MQ=255) cGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAtg > 1:678970/1‑148 (MQ=255) tttCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGa < 1:597401/148‑1 (MQ=255) ttCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGat > 1:475859/1‑148 (MQ=255) aacaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGattat < 1:286503/148‑1 (MQ=255) acaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGattatt < 1:1198/148‑1 (MQ=255) acaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGattatt > 2:698238/1‑148 (MQ=255) aaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTGAAGCGCGTGAAAAACAAACA‑TTTTGAAATAATTAGTTTTATAAACAATACGTTATGTGATTAtttt > 2:242789/1‑148 (MQ=255) aTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTa > 1:2551420/1‑148 (MQ=255) aTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTa > 2:929309/1‑148 (MQ=255) ttAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTaa > 1:1844736/1‑148 (MQ=255) tAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTaaa < 2:1401558/148‑1 (MQ=255) cTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAattatt < 2:1277773/148‑1 (MQ=255) tttCATCATTGCTTACCCGGTTATGTAGGAATCTTCGTTGCGTGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGAGAGTGAAAAACAAACA‑TTTTGAATTATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTAttt < 1:355840/148‑1 (MQ=255) tttCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTAttt < 2:848311/148‑1 (MQ=255) ttCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTAtttt > 2:1697332/1‑148 (MQ=255) tcatcaTTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTc < 2:3298878/148‑1 (MQ=255) tcatcaTTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTc > 1:1221260/1‑148 (MQ=255) catcatTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCa < 1:2946760/148‑1 (MQ=255) tcatTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACt < 1:1606816/148‑1 (MQ=255) catTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTg > 1:720675/1‑148 (MQ=255) atTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGc < 1:1525671/148‑1 (MQ=255) atTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGc < 1:3633636/148‑1 (MQ=255) tGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGTCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtt < 1:2158828/148‑1 (MQ=255) tGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtt > 2:1100344/1‑148 (MQ=255) tGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtt > 1:3019300/1‑148 (MQ=255) gCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAGAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtta < 2:647086/148‑1 (MQ=255) gCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtta < 2:2343395/148‑1 (MQ=255) aCCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTtattat < 2:1102571/148‑1 (MQ=255) aCCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTtattat < 1:1131140/148‑1 (MQ=255) ccGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCg < 2:387174/148‑1 (MQ=255) ttATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACgg < 1:3450235/148‑1 (MQ=255) tATGAAGTAATCTTCGTTGCGGGCAAGTATCTTCCGTCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGTTTATTTTAAATTATTTTCACTGCTTATTATCGACGGc < 2:3682523/148‑1 (MQ=255) aTGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCt < 1:1065949/148‑1 (MQ=255) gAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTaa > 2:3534040/1‑148 (MQ=255) aGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAAc > 1:3616566/1‑148 (MQ=255) ggAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACt < 2:2464059/148‑1 (MQ=255) tCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAttt > 1:1927178/1‑148 (MQ=255) tCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAttt > 2:2034885/1‑148 (MQ=255) tCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAttt < 2:796581/148‑1 (MQ=255) ttCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAttttt < 2:2680034/148‑1 (MQ=255) cGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGGTAAACTAttttttt < 1:1666639/148‑1 (MQ=255) tGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGc < 2:2938540/148‑1 (MQ=255) ggCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgat < 2:502709/148‑1 (MQ=255) gCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgata < 1:1282818/148‑1 (MQ=255) aGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactg > 1:3346138/1‑148 (MQ=255) tATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactgat < 2:3091985/148‑1 (MQ=255) tATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactgat < 1:18441/148‑1 (MQ=255) tATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactgat < 2:1844477/148‑1 (MQ=255) aTCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactgata > 2:2552000/1‑148 (MQ=255) aTCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactgata < 2:1547652/148‑1 (MQ=255) tCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGatat > 2:430967/1‑148 (MQ=255) tCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGatat < 2:241085/148‑1 (MQ=255) tCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGatat < 2:2169225/148‑1 (MQ=255) ttCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTAATACTGATATCg < 1:1254631/148‑1 (MQ=255) tCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGt < 2:1185169/148‑1 (MQ=255) ccGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTc < 2:3030166/148‑1 (MQ=255) cGGCCTTTTCGGGCTGTAAAGCTCTTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCt < 1:2606702/148‑1 (MQ=255) gCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCttt > 1:3251999/1‑148 (MQ=255) tttCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGcc < 2:2279654/148‑1 (MQ=255) gCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGaaa < 1:2285620/148‑1 (MQ=255) tAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTc > 1:3039842/1‑148 (MQ=255) gcgcGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggc > 2:3666747/1‑148 (MQ=255) gTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGgcggcg > 2:3789071/1‑148 (MQ=255) gAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCt > 2:1049738/1‑148 (MQ=255) aaacaaacA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGtt > 1:2437795/1‑148 (MQ=255) aacaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTg > 1:999438/1‑148 (MQ=255) aacaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTg > 1:966452/1‑148 (MQ=255) caaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGc > 1:3758599/1‑148 (MQ=255) | GGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGC > CP009273/4330279‑4330568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |