BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	360104 =	105 (0.480)	117 (0.540)	77/274	NT	52.7%	intergenic (‑38/+557)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor
*	?	CP009273	= 360286	NA (NA)	117 (0.540)	77/274	NT	52.7%	intergenic (‑220/+375)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor

Only 100 of 195 total aligned reads displayed.

CTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTT  >  CP009273/360143‑360433

cTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattggga                                                                                                                                                 <  2:3436168/148‑1 (MQ=38)

cTCCGGGCCGTTGCTTCGCAAAGTTCAAATACGCTCCCCGCGGATTTTTCCTAATCAGGAGAGCGTTCACCGACAAACAAAACATAAAAAGAAAGGCCCACTATTTCGACTGAGCCTTTCGTTTTATTTTATGCAAGgggaattaaat                                                                                                                                                 >  2:1101461/1‑144 (MQ=11)

cTCCGGGCCGGTGCTTCGCAACGTTCAACTCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattggga                                                                                                                                                 <  1:2111502/148‑1 (MQ=255)

     ggCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaattaa                                                                                                                                            <  1:492012/148‑1 (MQ=255)

     ggCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaattaa                                                                                                                                            <  1:492061/148‑1 (MQ=255)

     ggCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATGTGTCCTACTCCGGAGAGCGTTCACCGACCAACACCAGATAACACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaattaa                                                                                                                                            <  2:161587/148‑1 (MQ=14)

        cGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTc                                                                                                                                         <  1:1543264/148‑1 (MQ=255)

          ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTGCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAAGTGGGAATTAATTCtt                                                                                                                                       >  2:1640104/1‑148 (MQ=255)

              ttCGCAACGTACACATCCGCTCCCGGCGGATTTGGCCTACTCACGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAg                                                                                                                                   <  2:3632976/148‑1 (MQ=255)

               tCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                                  >  1:3483282/1‑148 (MQ=255)

                    aCGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGCATTGGGAATTAATTCTTGAATACGata                                                                                                                             >  2:2600921/1‑146 (MQ=255)

                    aCGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGACTTGGGAATTAATTCTTGAAGACGaca                                                                                                                             >  2:2623365/1‑146 (MQ=255)

                    aCGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTGTCGTTGTATTTGATGCCGGGGGACTTGGGAATTAATTCTTGAAGACGaaa                                                                                                                             >  1:787928/1‑148 (MQ=255)

                     cGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCTTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAg                                                                                                                            <  1:3314139/148‑1 (MQ=255)

                     cGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGACTTGGGAATTAATTCTTGAAGACGAAAg                                                                                                                            >  1:144934/1‑148 (MQ=255)

                           aaTCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCGGTCGTTTTATTTGATGCCTGGGGAATTGGGACTTAATTCTTGAAGACGAAAGGGCCTc                                                                                                                      >  1:1676861/1‑148 (MQ=255)

                                gCTCCCGGGGTTTTTGTCCTAATCAGGAGAGCGTTCACCGACAAACAACATATAAAACTAAAGGCCCAGTGTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTTGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGAt                                                                                                                 <  1:2067415/148‑1 (MQ=18)

                                    ccGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAACACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGc                                                                                                             <  1:1496818/148‑1 (MQ=255)

                                    ccGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGc                                                                                                             <  1:3396154/148‑1 (MQ=255)

                                      ggcggATTTGTCCCACACCGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCt                                                                                                           <  1:3042056/148‑1 (MQ=255)

                                       gcggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa                                                                                                          >  1:1805401/1‑148 (MQ=255)

                                       gcggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGGTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGACAGGGCCTCGTGATACGCCTa                                                                                                          >  2:824063/1‑148 (MQ=255)

                                           aTTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAATACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAtttt                                                                                                      >  2:2990108/1‑148 (MQ=255)

                                           aTTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAtttt                                                                                                      >  2:1513099/1‑148 (MQ=255)

                                            tttGTCCTACTCAGGAGAGCGTTCACCGACAAACCACAGATAACACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAttttt                                                                                                     <  2:2322606/148‑1 (MQ=255)

                                                tCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAg                                                                                                 <  1:2648599/148‑1 (MQ=255)

                                                 ccTACTCAGGAGAGCGTTCACCGACAACCAACAGATCACACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAgg                                                                                                <  2:3779744/148‑1 (MQ=255)

                                                     cTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                                                                                            <  1:1205959/148‑1 (MQ=255)

                                                     cTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                                                                                            <  1:307082/148‑1 (MQ=255)

                                                      tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAACGGCCCAGTCGTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAt                                                                                           <  1:476176/148‑1 (MQ=255)

                                                          gagaGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCa                                                                                       >  1:3814515/1‑148 (MQ=255)

                                                          gagaGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTGTATAGGTTAATGTCa                                                                                       >  2:3413293/1‑148 (MQ=255)

                                                            gagCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCTACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATg                                                                                     >  2:86825/1‑148 (MQ=255)

                                                              gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGTTTAATGTCATggg                                                                                   <  1:1884590/148‑1 (MQ=255)

                                                                     ccGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATcc                                                                            <  1:3279866/148‑1 (MQ=255)

                                                                        acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGACTTGGGACTTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGc                                                                         >  1:2146383/1‑148 (MQ=255)

                                                                        acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGc                                                                         >  2:1870176/1‑148 (MQ=255)

                                                                        acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGc                                                                         <  1:2599319/148‑1 (MQ=255)

                                                                        acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGc                                                                         >  1:1193059/1‑148 (MQ=255)

                                                                           aacaacAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGa                                                                      >  1:595266/1‑148 (MQ=255)

                                                                           aacaacAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGa                                                                      >  1:301845/1‑148 (MQ=255)

                                                                           aacaacAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTGTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTCATGTCATGGGAAGATCCAGCCGa                                                                      >  2:3176152/1‑148 (MQ=255)

                                                                            acaacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTGTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAc                                                                     >  1:851613/1‑148 (MQ=255)

                                                                             caacaGATAAAACGAAAGGCCCAGTCTTTCGACTGATCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCCTGGGAAGATCCAGCCGAcc                                                                    >  2:2870372/1‑148 (MQ=255)

                                                                             caacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAcc                                                                    >  2:2870168/1‑148 (MQ=255)

                                                                             caacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAcc                                                                    >  2:1870042/1‑148 (MQ=255)

                                                                              aacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCa                                                                   >  2:3579398/1‑148 (MQ=255)

                                                                               acaGATAAAACGAAAGGCCCAGTCTTTCGACTGATCCTTTCGTTTTATTTGATGCCTGGGGAAATGGGAATTAATTAGTGAAGAGGAAAGGGCCTCGTGATACGCCTATGTTTATAGGTTAATGTCATTGGAAGATCCAGCCGACCAg                                                                  >  2:3579799/1‑148 (MQ=37)

                                                                               acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGACTTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAg                                                                  >  2:1983827/1‑148 (MQ=255)

                                                                               acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAg                                                                  >  2:1685386/1‑148 (MQ=255)

                                                                               acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTAGTTGATGCCTGGGGCATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTGTATAGGTTAATGTCAGGGGAAGATCCAGCCGACCAg                                                                  >  2:486933/1‑148 (MQ=255)

                                                                               acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCGTTGGGTTTCTTTGATGCCTGGGGCCTTGGGCATTAATTCTTGTGGACGCAAGGGCCTCGTGGGACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAg                                                                  >  1:1007528/1‑148 (MQ=25)

                                                                                caGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAgg                                                                 >  2:3102140/1‑148 (MQ=255)

                                                                                  gATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCt                                                               <  1:897808/148‑1 (MQ=255)

                                                                                     aaaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGACGTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTc                                                            >  2:1630229/1‑148 (MQ=255)

                                                                                           aaaGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                                                                                     <  2:2160156/53‑1 (MQ=255)

                                                                                           aaaGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGcc                                                      <  1:2193687/148‑1 (MQ=255)

                                                                                             aGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcg                                                    >  2:2070343/1‑148 (MQ=255)

                                                                                             aGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcg                                                    >  1:1757397/1‑148 (MQ=255)

                                                                                             aGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcg                                                    >  1:1860460/1‑148 (MQ=255)

                                                                                              ggCCCAGTCTTTCGACTGAGCCTTTCGTTTTTTTTGATGGCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCGTTCCACGCCcgc                                                   >  1:375107/1‑148 (MQ=255)

                                                                                              ggCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcgc                                                   >  1:2966832/1‑148 (MQ=255)

                                                                                              ggCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcgc                                                   >  1:3282536/1‑148 (MQ=255)

                                                                                              ggCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcgc                                                   >  2:1169669/1‑148 (MQ=255)

                                                                                              ggCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcgc                                                   >  1:3366142/1‑148 (MQ=255)

                                                                                               gCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcgcg                                                  >  2:196804/1‑148 (MQ=255)

                                                                                               gCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcgcg                                                  >  2:197329/1‑148 (MQ=255)

                                                                                                cccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGACTATTTTTATAGGGTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGt                                                 >  1:44158/1‑148 (MQ=255)

                                                                                                    gTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCg                                             >  1:1399890/1‑148 (MQ=255)

                                                                                                     tCTTTCGACTGAGCCTTTCGTTTTATTTTATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCATCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGc                                            >  1:3124253/1‑148 (MQ=255)

                                                                                                      cTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCt                                           >  1:2628695/1‑148 (MQ=255)

                                                                                                              tGAGCCTTTCGTTTTATTTGATGCCTGGGGAAGTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCg                                   >  2:936700/1‑148 (MQ=255)

                                                                                                               gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTTAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATACAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGt                                  >  1:662538/1‑148 (MQ=255)

                                                                                                               gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGt                                  >  2:722074/1‑148 (MQ=255)

                                                                                                               gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGt                                  <  2:159981/148‑1 (MQ=255)

                                                                                                               gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGt                                  <  1:1968850/148‑1 (MQ=255)

                                                                                                               gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGt                                  >  2:2192498/1‑148 (MQ=255)

                                                                                                                      tCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTcgcgcg                           >  1:1123821/1‑148 (MQ=255)

                                                                                                                      tCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTcgcgcg                           >  1:191981/1‑148 (MQ=255)

                                                                                                                         ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGtt                        >  1:3224664/1‑148 (MQ=255)

                                                                                                                         ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGtt                        >  2:385035/1‑148 (MQ=255)

                                                                                                                         ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGtt                        >  2:2271326/1‑148 (MQ=255)

                                                                                                                          tttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTtc                       >  2:2688721/1‑148 (MQ=255)

                                                                                                                          tttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTtc                       >  2:2238028/1‑148 (MQ=255)

                                                                                                                          tttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTtc                       >  2:2744365/1‑148 (MQ=255)

                                                                                                                          tttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTtc                       >  2:2744363/1‑148 (MQ=255)

                                                                                                                             aTTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCg                    >  1:1720471/1‑148 (MQ=255)

                                                                                                                                   tGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcg              <  2:2701193/148‑1 (MQ=255)

                                                                                                                                   tGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcg              >  1:1220703/1‑148 (MQ=255)

                                                                                                                                    gCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcgc             >  1:3784768/1‑148 (MQ=255)

                                                                                                                                      cTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACgcgc           <  1:1870176/148‑1 (MQ=255)

                                                                                                                                       tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCt          >  2:1403484/1‑148 (MQ=255)

                                                                                                                                         gggaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGc        >  2:3257526/1‑148 (MQ=255)

                                                                                                                                         gggaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGc        >  1:2916561/1‑148 (MQ=255)

                                                                                                                                           gaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCcg      <  1:3254393/148‑1 (MQ=255)

                                                                                                                                           gaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCcg      >  2:1786835/1‑148 (MQ=255)

                                                                                                                                             attgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCcgcg    <  1:1920651/148‑1 (MQ=255)

                                                                                                                                               tgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGtt  >  1:245870/1‑148 (MQ=255)

                                                                                                                                               tgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGtt  >  1:3528268/1‑148 (MQ=255)

                                                                                                                                               tgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGtt  >  1:1506906/1‑148 (MQ=255)

CTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTT  >  CP009273/360143‑360433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.