| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3180783 | NA (NA) | 235 (1.100) | 122/270 | NT | 96.8% | pseudogene (4/2445 nt) | yqiG | pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein |
| ? | CP009273 | = 3833569 | 8 (0.040) | intergenic (‑216/‑6) | nlpA/yicS | cytoplasmic membrane lipoprotein‑28/putative periplasmic protein | |||||
Only 100 of 560 total aligned reads displayed.
GCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCAC > CP009273/3833422‑3833716 | gCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTG > 2:1406641‑M2/1‑148 (MQ=255) aTCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgat > 2:3014093‑M2/1‑145 (MQ=255) aTCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgat < 2:1124248‑M2/148‑4 (MQ=255) aGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccc > 1:3741734‑M2/1‑138 (MQ=255) gAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccct < 1:598964‑M2/148‑12 (MQ=255) gAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccct > 2:2397492‑M2/1‑137 (MQ=255) ccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCa > 1:995396‑M1/127‑148 (MQ=255) aaaaaGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatat < 2:1923569‑M2/148‑16 (MQ=255) ctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGa < 1:3457967‑M1/26‑1 (MQ=255) ctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGa < 1:2288643‑M1/26‑1 (MQ=255) gAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccag < 1:2035873‑M2/148‑22 (MQ=255) gAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccag > 2:2551532‑M2/1‑127 (MQ=255) cgtttctccggccataagaaatcaatcatctgttctcaaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGacac > 2:221176‑M1/120‑148 (MQ=255) aaTAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccaga < 2:3273553‑M2/148‑23 (MQ=255) ttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACactac < 1:1405903‑M1/32‑1 (MQ=255) gtctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactcggattaagactatcacttatttaagtgatattggttgtctggagatgcagggggccagtctAATGGTTGAATCCGTGAAACCAACGACactac < 1:2821951‑M1/32‑1 (MQ=255) ctccggccctaagacatcaatactctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTg > 2:2740444‑M1/115‑148 (MQ=255) tccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGc > 2:585346‑M1/114‑148 (MQ=255) aGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctg < 1:715250‑M2/148‑29 (MQ=255) gAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttat > 2:2593926‑M2/1‑116 (MQ=255) taagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTc < 1:1160844‑M1/43‑1 (MQ=255) aaaGTCTGGCACTTCTTACTGACCACGCAAGCGCGTGTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcactta < 2:752763‑M2/148‑39 (MQ=255) acatcaatcatctgttctccaatgactagtctaaaaactagtattaagaatatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACtt > 2:1471158‑M1/102‑148 (MQ=255) caatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACtttttt < 1:2247397‑M1/51‑1 (MQ=255) ggCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccatt < 2:3521798‑M2/148‑46 (MQ=255) ggCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccatt < 1:1950193‑M2/148‑46 (MQ=255) ggCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccatt < 1:3425348‑M2/148‑46 (MQ=255) atcatctgttctccatttactagtctaaaaactagtattaagaatatcacttatttaagtgttattggttgtctggagattcagggggcctgtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCg > 1:1528219‑M1/96‑148 (MQ=255) ataatctgttctccaatgactagtctaaaaactattattaagactataacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCg > 2:3729327‑M1/96‑148 (MQ=255) catctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCt < 2:2107911‑M1/55‑1 (MQ=255) tcttACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagc < 1:48285‑M2/148‑52 (MQ=255) tcttACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagc < 1:2688906‑M2/148‑52 (MQ=255) gttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGcc > 2:3366430‑M1/89‑148 (MQ=255) ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAACGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCa > 1:2117987‑M1/84‑148 (MQ=255) ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCa < 1:1650252‑M1/65‑1 (MQ=255) ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCa < 2:1800608‑M1/65‑1 (MQ=255) aCCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgcc < 1:2340284‑M2/148‑60 (MQ=255) tgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGt > 2:3120702‑M1/80‑148 (MQ=255) tgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGt < 1:2772032‑M1/69‑1 (MQ=255) tgactagtataaaaactagtattaagactatcaattatttaagttatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGt > 2:2282082‑M1/80‑148 (MQ=255) actagtctaaaaactagtattaagcctaccacttatttccgtgatattggttgtctggagattcagggggccagtctAAAGGTTGATTCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGtat > 2:1170102‑M1/78‑148 (MQ=255) ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCCTCGtata < 2:2650588‑M1/72‑1 (MQ=255) tctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGcc > 2:1739693‑M1/73‑148 (MQ=255) ctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCg < 1:1104669‑M1/77‑1 (MQ=255) aaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAg < 2:3413845‑M1/79‑1 (MQ=255) aaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTc < 1:1220230‑M1/81‑1 (MQ=255) tCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg > 1:1615699‑M2/1‑73 (MQ=255) actagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGc < 1:2566463‑M1/83‑1 (MQ=255) ctattattaagaatataaattatttatgttattttggttgtctggatattccgggggcaattctAATGTTTGAATCCATCAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGcc > 1:15587‑M1/65‑148 (MQ=255) ctagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTTAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGcc > 1:3341839‑M1/65‑148 (MQ=255) tagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCt < 1:3551523‑M1/85‑1 (MQ=255) gTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg > 1:1864054‑M2/1‑71 (MQ=255) tattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCtttt < 1:2411251‑M1/88‑1 (MQ=255) aGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcg > 2:3577076‑M2/1‑67 (MQ=255) ttaagactatcaattatttaagtgattttggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAg > 1:870475‑M1/59‑148 (MQ=255) taagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGc < 1:323048‑M1/91‑1 (MQ=255) taagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGc < 1:688949‑M1/91‑1 (MQ=255) cATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgat < 1:2077188‑M2/148‑84 (MQ=255) gactatcacttatttaagtgatattggttgtctggagattccgggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCa > 1:1786727‑M1/55‑148 (MQ=255) atgaGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacc > 1:1029054‑M2/1‑61 (MQ=255) actatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCAc < 1:1995886‑M1/95‑1 (MQ=255) actataaattatttaagttattttggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCAc > 1:173445‑M1/54‑148 (MQ=255) gagCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagc < 1:3192731‑M2/148‑92 (MQ=255) gagCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagc < 1:3682118‑M2/148‑92 (MQ=255) tatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCg < 2:3053863‑M1/104‑1 (MQ=255) ttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCaa < 1:790986‑M1/107‑1 (MQ=255) aCTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgc < 1:533595‑M2/148‑107 (MQ=255) ttggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAAc < 2:3768722‑M1/117‑1 (MQ=255) acacTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccat > 2:1524672‑M2/1‑39 (MQ=255) cacTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccatt < 1:2919550‑M2/148‑111 (MQ=255) ggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCa > 2:3096101‑M1/30‑148 (MQ=255) gtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGt > 2:3457967‑M1/26‑148 (MQ=255) aTGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtta > 1:2517080‑M2/1‑33 (MQ=255) tctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTa < 1:1480429‑M1/124‑1 (MQ=255) gCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttata > 1:380703‑M2/1‑31 (MQ=255) cTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataa > 1:3521747‑M2/1‑30 (MQ=255) aTTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgct > 2:427845‑M2/1‑26 (MQ=255) aTTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgct > 2:1068576‑M2/1‑26 (MQ=255) attcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAg < 2:1013898‑M1/131‑1 (MQ=255) ttcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGa < 2:2815158‑M1/132‑1 (MQ=255) tctgggggccagtatAAAGTTTTAATCCATCAAACAAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGAt > 1:3026247‑M1/16‑148 (MQ=255) gggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTa < 1:2494023‑M1/136‑1 (MQ=255) cacaTTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcc < 2:2471468‑M2/148‑131 (MQ=255) cacaTTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcc < 2:1660850‑M2/148‑131 (MQ=255) caTTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctc > 2:795263‑M2/1‑16 (MQ=255) aTTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctct < 2:319188‑M2/148‑134 (MQ=255) aTTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctct < 2:3644246‑M2/148‑134 (MQ=255) tttGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctg > 2:1337305‑M2/1‑14 (MQ=255) tttGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctg < 1:2544617‑M2/148‑135 (MQ=255) ttGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgc < 2:2881223‑M2/148‑136 (MQ=255) gtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAAt < 2:2319602‑M1/144‑1 (MQ=255) ggTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttct < 2:2994171‑M2/148‑144 (MQ=255) gTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctt < 2:1676670‑M2/148‑145 (MQ=255) gTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatgcccgtggcgagcgataacccagcgcactatgcggatgcaattcgttataatgctcgaacgcctctgcaaggttctt > 1:1325337‑M2/1‑4 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttg > 2:1857082‑M2/1‑2 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttg < 2:2057921‑M2/148‑147 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttg > 2:2173482‑M2/1‑2 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttg > 2:67261‑M2/1‑2 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttg < 2:1206244‑M2/148‑147 (MQ=255) ggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggtgctttgc < 1:2743565‑M2/148‑148 (MQ=255) | GCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCAC > CP009273/3833422‑3833716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |