| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,638,641 | C→A | 100% | intergenic (‑99/‑104) | prlC ← / → rlmJ | oligopeptidase A/23S rRNA m(6)A2030 methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,638,641 | 0 | C | A | 97.2% | 692.5 / 8.8 | 224 | intergenic (‑99/‑104) | prlC/rlmJ | oligopeptidase A/23S rRNA m(6)A2030 methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (3/4); new base A (122/95); total (125/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 226 total aligned reads displayed.
TTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGC > CP009273/3638496‑3638785 | aGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGACTTTCAATGAGAAAAGTTa > 2:2044471/1‑148 (MQ=255) aaaaCGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACg > 2:1786407/1‑148 (MQ=255) aaaaCGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACg > 2:1786045/1‑148 (MQ=255) aaaCGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGc < 1:1603092/148‑1 (MQ=255) aCGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCtt > 2:2959202/1‑148 (MQ=255) cGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCttt > 1:1045666/1‑148 (MQ=255) ggAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTc < 2:3458016/148‑1 (MQ=255) gAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTcg > 2:2620034/1‑148 (MQ=255) gCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcgg < 1:1582225/148‑1 (MQ=255) aTTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggcgg > 2:3564526/1‑148 (MQ=255) aTTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggcgg > 2:1671539/1‑148 (MQ=255) ttCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggcggc > 1:1117956/1‑148 (MQ=255) ttCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggcggc > 1:2119839/1‑148 (MQ=255) aaaGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCggcggcggc < 2:2135728/148‑1 (MQ=255) aaGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGcc > 2:1225821/1‑148 (MQ=255) aGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCct < 1:246603/148‑1 (MQ=255) aGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCct > 2:2654786/1‑148 (MQ=255) gggAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCctc > 1:1956694/1‑148 (MQ=255) gggAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCctc < 2:1956314/148‑1 (MQ=255) ggAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCctct > 1:3124156/1‑148 (MQ=255) ggAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCctct > 1:1093257/1‑148 (MQ=255) gTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCtttt < 2:591825/148‑1 (MQ=255) gTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCtttt < 2:1203739/148‑1 (MQ=255) tCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTc > 2:3029542/1‑148 (MQ=255) gTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGt < 2:318615/148‑1 (MQ=255) gTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGt > 1:905522/1‑148 (MQ=255) tAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTGGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCGCGTTTCGGta > 1:2014678/1‑148 (MQ=255) tAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGta > 1:2014890/1‑148 (MQ=255) tAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGta > 1:231323/1‑148 (MQ=255) tAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGta < 2:3794554/148‑1 (MQ=255) gATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTg < 2:1618949/148‑1 (MQ=255) ttCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTc < 1:3657726/148‑1 (MQ=255) tCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATTAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTACTGa > 1:44149/1‑148 (MQ=255) tCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGa > 2:1642118/1‑148 (MQ=255) tCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGa > 1:1795709/1‑148 (MQ=255) cATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGAt > 2:681710/1‑148 (MQ=255) cATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGAt > 1:2910947/1‑148 (MQ=255) cgcAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCtt < 2:2150515/148‑1 (MQ=255) gcAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCttt < 2:1914603/148‑1 (MQ=255) cAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCtttt < 2:3066994/148‑1 (MQ=255) gTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTtgt < 1:3089862/148‑1 (MQ=255) gTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTtgt < 1:3088681/148‑1 (MQ=255) ccTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTgc > 2:543998/1‑148 (MQ=255) tGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACAAAATGTGTGTAGCATGGGGTTAAGTCTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGAGGCGGCCTCTTTTCGTTATACTGTCCTGATACGCTTTTGTgcgc > 2:871918/1‑148 (MQ=255) gTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGccc < 1:1998807/148‑1 (MQ=255) tAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCg > 1:3768018/1‑148 (MQ=255) aaaGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGa > 2:855035/1‑148 (MQ=255) agagGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAAt > 1:2660405/1‑148 (MQ=255) gagGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTGTGTGCGCCCCGAATa > 2:1440543/1‑148 (MQ=255) gagGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATa < 2:1341758/148‑1 (MQ=255) gagGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATa > 1:1647185/1‑148 (MQ=255) gagGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATa < 2:3247970/148‑1 (MQ=255) gagGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATa < 2:3061321/148‑1 (MQ=255) ttAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACggg < 2:3652680/148‑1 (MQ=255) ttAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACggg > 1:3020974/1‑148 (MQ=255) tAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGc > 1:3261293/1‑148 (MQ=255) aGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCg > 2:2112002/1‑148 (MQ=255) ggAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGa > 2:3704987/1‑148 (MQ=255) ggAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGa > 2:3284347/1‑148 (MQ=255) gAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAt > 2:2935098/1‑148 (MQ=255) gAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAt < 1:346617/148‑1 (MQ=255) aaGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAtt < 1:238818/148‑1 (MQ=255) aaGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAtt < 1:45836/148‑1 (MQ=255) cgcTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAttttt < 2:2482148/148‑1 (MQ=255) gcTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTtta < 1:483619/148‑1 (MQ=255) cAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttactt > 1:1140968/1‑148 (MQ=255) aaCAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttactta < 1:999148/148‑1 (MQ=255) gcgcTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGa < 2:71348/148‑1 (MQ=255) gcgcTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGa < 2:548822/148‑1 (MQ=255) gcgcTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGa < 1:3029542/148‑1 (MQ=255) gcTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAac < 2:1044306/148‑1 (MQ=255) ttACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACAcc > 1:2211332/1‑148 (MQ=255) ttACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACAcc < 2:2014785/148‑1 (MQ=255) ttACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACAcc < 2:2011404/148‑1 (MQ=255) tACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCt < 2:2995640/148‑1 (MQ=255) aCATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCtt < 2:3335122/148‑1 (MQ=255) cATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCttt < 2:890244/148‑1 (MQ=255) cATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCttt > 2:2024058/1‑148 (MQ=255) cATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCttt < 1:310546/148‑1 (MQ=255) tAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTAc > 1:1850522/1‑148 (MQ=255) aaTGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTAcc > 1:690251/1‑148 (MQ=255) aTGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTAccc > 2:1066088/1‑148 (MQ=255) tgtgtgTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTAACGGAACACCTTTACCCa > 1:3232596/1‑148 (MQ=255) gtgtgtAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCAt > 2:2833502/1‑148 (MQ=255) gtAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTc < 1:2802785/148‑1 (MQ=255) gCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGt < 1:907344/148‑1 (MQ=255) cATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGtt < 1:1321469/148‑1 (MQ=255) ggTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGc > 2:1999651/1‑148 (MQ=255) gtgtAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGc < 1:3411590/148‑1 (MQ=255) gtAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCtt < 1:2620453/148‑1 (MQ=255) aGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTc < 1:12099/148‑1 (MQ=255) aGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTc < 2:2325289/148‑1 (MQ=255) aaTTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGc > 2:2528143/1‑148 (MQ=255) tttCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTg > 2:3607502/1‑148 (MQ=255) aaTGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCaa < 2:1616053/148‑1 (MQ=255) aTGAGAAAAGTTACGCTTTCTCGGCGGCGGCCTCTTTTCGGTATACTGTACTTATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCatc < 2:2471879/148‑3 (MQ=255) tGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAAcc > 2:258783/1‑148 (MQ=255) gaAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACg < 2:1911926/148‑1 (MQ=255) aaaaGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGc > 2:419995/1‑148 (MQ=255) aaaaGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGc > 1:1906613/1‑148 (MQ=255) | TTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGC > CP009273/3638496‑3638785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |