| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,698,119 | C→A | 100% | M1M (ATG→ATT) † | dppC ← | dipeptide/heme transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,698,119 | 0 | C | A | 100.0% | 627.5 / NA | 192 | M1M (ATG→ATT) † | dppC | dipeptide/heme transporter |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (96/96); total (96/96) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 192 total aligned reads displayed.
GGCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAGTGCG > CP009273/3697975‑3698263 | ggCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAatg < 2:365614/148‑1 (MQ=255)ggCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAatg < 1:3062030/148‑1 (MQ=255) gCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAatga > 1:1770794/1‑148 (MQ=255) aaGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGt < 1:3400208/148‑1 (MQ=255) aaGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGt > 2:688334/1‑148 (MQ=255) aGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTc > 2:1987618/1‑148 (MQ=255) aGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTc < 2:1400956/148‑1 (MQ=255) gATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTcc > 1:2640841/1‑148 (MQ=255) aTCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGTGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTccc < 2:3326506/148‑1 (MQ=255) aTCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTccc < 1:1727929/148‑1 (MQ=255) aTCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTccc > 2:3302640/1‑148 (MQ=255) aTCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTccc < 2:2672464/148‑1 (MQ=255) tCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTcccc < 2:1013041/148‑1 (MQ=255) gcgATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCtt < 1:297030/148‑1 (MQ=255) cgATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTa < 2:3739979/148‑1 (MQ=255) aTGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTAct < 1:1573657/148‑1 (MQ=255) tGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActt > 2:2211774/1‑148 (MQ=255) tGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActt < 2:653592/148‑1 (MQ=255) tGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActt > 2:3645603/1‑148 (MQ=255) tGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActt < 1:3370890/148‑1 (MQ=255) gAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActtc < 1:789558/148‑1 (MQ=255) aaCAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActtct < 1:2485289/148‑1 (MQ=255) aCAGCACGATGACGGCGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActtctt > 1:413636/1‑148 (MQ=255) aCAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActtctt < 2:3591343/148‑1 (MQ=255) aCAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActtctt > 2:2267683/1‑148 (MQ=255) aCAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActtctt < 2:2052838/148‑1 (MQ=255) aCAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActtctt > 1:3226872/1‑148 (MQ=255) aCAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActtctt < 1:3242655/148‑1 (MQ=255) cAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTa > 1:2841444/1‑148 (MQ=255) cACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGa > 1:1907248/1‑148 (MQ=255) cACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGa > 1:630093/1‑148 (MQ=255) cGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACg > 2:1496123/1‑148 (MQ=255) gATGACGACGTAATCCAGCCCGACGAGCGCTCCTTTTTTGCGTTTATTATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTTACGTGTGAATTTATGTCCCCTTAGTTCTTTTGagtt < 2:3089531/148‑4 (MQ=255) cgacgTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATAcg < 2:1789122/148‑1 (MQ=255) gacgTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATAcgc < 1:3600416/148‑1 (MQ=255) acgTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATAcgcg > 2:507642/1‑148 (MQ=255) cgTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCgg > 2:1870919/1‑148 (MQ=255) tAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGt > 2:2787628/1‑148 (MQ=255) tAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGt < 1:1149330/148‑1 (MQ=255) cccGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACg > 1:2972860/1‑148 (MQ=255) cccGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACg < 2:1283475/148‑1 (MQ=255) cccGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACg > 2:916919/1‑148 (MQ=255) cccGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACg > 2:2477171/1‑148 (MQ=255) acgacCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGt > 1:3175468/1‑148 (MQ=255) ccTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGAt < 2:3297421/148‑1 (MQ=255) gttgCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGAcc < 1:2828170/148‑1 (MQ=255) ttgCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCa > 2:2854710/1‑148 (MQ=255) ttgCGTTTAAAATAGTGCCAGAACTCCTATAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCa > 2:3259276/1‑148 (MQ=255) cGTTTAAAATTGTGCCAGTACTCCTTTAACGGGGTCATCGGCACCGGTGCTCTAATCACTTTATTTTCAGTAACCTTTGAAATGATGTCCCCTTACTTCTTATGAAGAATACGCGGGTTCACCACGGCGTACATCAGATCGACCAGCa < 2:1655758/148‑1 (MQ=255) cGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCa < 2:1655797/148‑1 (MQ=255) cGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCa > 1:1020616/1‑148 (MQ=255) tttAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAg < 2:1530450/148‑1 (MQ=255) aaaaTAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTg < 1:1432967/148‑1 (MQ=255) aaTAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGAc > 2:1206960/1‑148 (MQ=255) gTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAgg < 1:2358902/148‑1 (MQ=255) gTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAgg > 2:502329/1‑148 (MQ=255) gTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAgg < 2:2976214/148‑1 (MQ=255) tGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGa > 1:3063979/1‑148 (MQ=255) gCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGTGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGAt > 2:1728888/1‑148 (MQ=255) gAACTCCTGTAACGGGGTCATCGGCACCGGTGTGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAatc < 1:1728888/148‑1 (MQ=255) aaCTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAatca < 2:191824/148‑1 (MQ=255) aCTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAatcat < 1:1390016/148‑1 (MQ=255) ccTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCAtcgt < 2:3536396/148‑1 (MQ=255) ccTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCAtcgt < 1:89213/148‑1 (MQ=255) ccTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCAtcgt < 1:89257/148‑1 (MQ=255) gTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGc < 2:926681/148‑1 (MQ=255) aCGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCACGTTGACGAGGATAATCATCGTCGccac > 2:739016/1‑148 (MQ=255) gggTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAg > 2:943516/1‑148 (MQ=255) ggTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGc < 1:3714453/148‑1 (MQ=255) gTCCTCGGCACCGGTGCGCGAATCACTTTATTTTCAGTAACCTGTGAACTGATGTCCCCTTACTTCTTAGGAAGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCa < 1:3673132/148‑1 (MQ=255) gTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCa < 1:1850135/148‑1 (MQ=255) gCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATAcgcc > 1:471584/1‑148 (MQ=255) cACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATAcgccg > 1:1287060/1‑148 (MQ=255) aCCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATAcgccgc > 1:1437943/1‑148 (MQ=255) cTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTa > 2:2321778/1‑148 (MQ=255) aTCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCg > 2:1186720/1‑148 (MQ=255) tCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCgg > 1:1927996/1‑148 (MQ=255) tCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCgg < 1:1870919/148‑1 (MQ=255) tCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCgg > 1:2795471/1‑148 (MQ=255) tCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCgg < 1:519875/148‑1 (MQ=255) cACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGa > 2:482906/1‑148 (MQ=255) cTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATa > 1:1588502/1‑148 (MQ=255) cTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATa < 1:688334/148‑1 (MQ=255) cTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATa > 2:1446155/1‑148 (MQ=255) cTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCAGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATa > 2:3751380/1‑148 (MQ=255) ttATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGt > 2:940799/1‑148 (MQ=255) ttATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGt > 2:1324372/1‑148 (MQ=255) ttttCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTcgc > 1:2054521/1‑148 (MQ=255) ttttCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTcgc > 2:1144299/1‑148 (MQ=255) tttCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTcgcg > 2:2579213/1‑148 (MQ=255) ttCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCgcgg > 1:2697324/1‑148 (MQ=255) cAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCgcggcg < 1:2587752/148‑1 (MQ=255) tAACCTGTGAAATGATGTCCCCTTACTTCTTATTACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTTACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTg > 1:378404/1‑148 (MQ=255) tAACCTGTGAAATGATGTCCCCTTACTTCTTATTACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTg > 1:378601/1‑148 (MQ=255) aCCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCa < 1:2557301/148‑1 (MQ=255) ccTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAg < 1:1499909/148‑1 (MQ=255) ccTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAg < 1:3501726/148‑1 (MQ=255) tgtgAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAGTg > 1:3000657/1‑148 (MQ=255) gtgAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAGTGc > 1:2346709/1‑148 (MQ=255) tgAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAGTGCg > 1:3800130/1‑148 (MQ=255) | GGCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAGTGCG > CP009273/3697975‑3698263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |