| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,865,120 | C→A | 100% | intergenic (‑30/+90) | dgoT ← / ← dgoD | D‑galactonate transporter/galactonate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,865,120 | 0 | C | A | 98.3% | 769.9 / 2.9 | 240 | intergenic (‑30/+90) | dgoT/dgoD | D‑galactonate transporter/galactonate dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (1/3); new base A (92/144); total (93/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 241 total aligned reads displayed.
GAAGCCACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGCCAGTC > CP009273/3864975‑3865263 | aGCCACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAg < 2:1464940/148‑1 (MQ=255) ccACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGcc > 2:3755557/1‑148 (MQ=255) cACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCg < 2:1988589/148‑1 (MQ=255) cGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCt > 1:3660388/1‑148 (MQ=255) ccAGGTTGGCGCGGTCGACATAACAAATGACTACCTTAATAAAGATCATCACCAGCGTAAGATAACGCCGACGCCCCGGATTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCAc < 1:1712585/148‑1 (MQ=255) ccAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCAc < 2:2062258/148‑1 (MQ=255) ccAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCAc > 2:1453485/1‑148 (MQ=255) cAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCAcc < 2:853918/148‑1 (MQ=255) tGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGcc < 2:904358/148‑1 (MQ=255) gcgcGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCt < 2:1923049/148‑1 (MQ=255) cgcgGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTg < 2:2208633/148‑1 (MQ=255) cgcgGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTg < 1:1692793/148‑1 (MQ=255) gcgGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGt < 2:105637/148‑1 (MQ=255) cgGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTa < 2:2392737/148‑1 (MQ=255) gTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAAt < 2:3017260/148‑1 (MQ=255) tCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAAtt < 1:2388723/148‑1 (MQ=255) cGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAAttt < 2:782035/148‑1 (MQ=255) cGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTGTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAAttt < 2:3216374/148‑1 (MQ=255) aCATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTAc < 2:1749754/148‑1 (MQ=255) cATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTCATTTACa > 2:3213288/1‑148 (MQ=255) cATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTCATTTACa > 2:2907340/1‑148 (MQ=255) aTAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACag > 1:1096418/1‑148 (MQ=255) tAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCGTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACaga < 1:3052030/148‑1 (MQ=255) aCAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAgg < 2:1409678/148‑1 (MQ=255) cAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAggg < 1:160594/148‑1 (MQ=255) cAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAggg < 1:3777419/148‑1 (MQ=255) aaaTGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGt < 2:1321112/148‑1 (MQ=255) aaaTGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGt > 1:118616/1‑148 (MQ=255) aaTGACTACCGTAAAAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATGAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCTCTCACAATGCCCTGTAAATAACAGAGGGtt > 2:1789403/1‑148 (MQ=255) aTGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTta < 1:1025307/148‑1 (MQ=255) tGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTtat > 1:21202/1‑148 (MQ=255) tGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTtat > 2:3381464/1‑148 (MQ=255) gACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTtata > 1:2952114/1‑148 (MQ=255) cGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTg < 1:2651123/148‑1 (MQ=255) taataaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTa > 2:1380312/1‑148 (MQ=255) aataaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTAt < 1:2236105/148‑1 (MQ=255) aataaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTAt > 2:3254538/1‑148 (MQ=255) aataaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTAt > 2:3297068/1‑148 (MQ=255) aataaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTAt < 2:505156/148‑1 (MQ=255) aataaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTAt < 1:594978/148‑1 (MQ=255) aataaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTAGGGAATAGAGAAGCCGCTCACCATGCCCTGTACTTTACAGAGGGTTATATGTTTGTAt > 2:2889626/1‑148 (MQ=255) ataaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTa > 2:2211982/1‑146 (MQ=255) ataaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTAtt > 2:962166/1‑148 (MQ=255) taaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTg > 2:3603711/1‑148 (MQ=255) aGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTg < 1:1608997/148‑1 (MQ=255) gATCATCACCCGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGt < 1:185122/148‑1 (MQ=255) gATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGt < 1:1131457/148‑1 (MQ=255) gATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGt < 2:1310098/148‑1 (MQ=255) gATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGt < 2:478779/148‑1 (MQ=255) tcatcaCCAGCGTCAGATCACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGttt < 2:3540417/148‑1 (MQ=255) catcaCCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGtttt > 2:1808794/1‑148 (MQ=255) atcaCCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTa < 2:3249166/148‑1 (MQ=255) tcaCCAGCGTCAGATAGCGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAg > 1:2668932/1‑148 (MQ=255) caCCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGt > 2:2686315/1‑148 (MQ=255) ccAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGc > 2:3450343/1‑148 (MQ=255) aGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGccc > 1:44194/1‑148 (MQ=255) gCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCg < 2:1091954/148‑1 (MQ=255) gCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCg > 2:1384675/1‑148 (MQ=255) cGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGa < 2:2188618/148‑1 (MQ=255) cGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGa > 1:2263345/1‑148 (MQ=255) tCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATg < 1:2961233/148‑1 (MQ=255) gATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAgg < 1:9017/148‑1 (MQ=255) aCGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCt > 1:2561488/1‑148 (MQ=255) cGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGCTGAGGGGCtt > 2:580021/1‑148 (MQ=255) cGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACg < 1:1308907/148‑1 (MQ=255) cGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACg < 2:2302875/148‑1 (MQ=255) cGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTgg > 2:424185/1‑148 (MQ=255) cGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTGGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTgg < 1:3076780/148‑1 (MQ=255) ccccGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCa < 1:806338/148‑1 (MQ=255) cTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAAtt < 1:3172498/148‑1 (MQ=255) cTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAAtt > 1:1789629/1‑148 (MQ=255) cTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAAtt < 1:1765610/148‑1 (MQ=255) tttGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTACAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTa < 1:1104291/148‑1 (MQ=255) ttGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTAc > 2:1193054/1‑148 (MQ=255) gctgcATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCa < 1:1285594/148‑1 (MQ=255) ctgcATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCAc > 1:1382860/1‑148 (MQ=255) tgcATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCAct < 1:2326548/148‑1 (MQ=255) tgcATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCAct > 1:144767/1‑148 (MQ=255) gcATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCActc < 2:2679767/148‑1 (MQ=255) ttAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGc > 1:2202434/1‑148 (MQ=255) tCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATc < 1:3390055/148‑1 (MQ=255) tCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATc < 2:3279970/148‑1 (MQ=255) ccATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCt > 1:1477535/1‑148 (MQ=255) ccATAGCGAGCGTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCt < 1:720241/148‑1 (MQ=255) cATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCtt > 2:3718079/1‑148 (MQ=255) aTAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTc < 1:307252/148‑1 (MQ=255) aTAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTc < 1:3603711/148‑1 (MQ=255) tAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCa < 2:2952114/148‑1 (MQ=255) tAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCa < 1:3017625/148‑1 (MQ=255) tAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCa < 1:84325/148‑1 (MQ=255) tcCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGc > 1:791644/1‑148 (MQ=255) gATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGAt > 1:3803417/1‑148 (MQ=255) aTTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGAtt > 1:1558889/1‑148 (MQ=255) aTTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGAtt < 1:1890127/148‑1 (MQ=255) aTTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGAtt < 1:2070326/148‑1 (MQ=255) aTTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGAtt < 1:2071021/148‑1 (MQ=255) tGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGc < 2:1676901/148‑1 (MQ=255) gggCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGcc < 2:2904507/148‑1 (MQ=255) gggCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGcc < 2:2488942/148‑1 (MQ=255) aTAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGCCAGTc > 2:504622/1‑148 (MQ=255) | GAAGCCACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGCCAGTC > CP009273/3864975‑3865263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |