| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,875,588 | T→A | 5.1% | N32Y (AAT→TAT) | dnaN ← | DNA polymerase III, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,875,588 | 0 | T | A | 5.1% | 785.7 / 25.3 | 256 | N32Y (AAT→TAT) | dnaN | DNA polymerase III, beta subunit |
| Reads supporting (aligned to +/- strand): ref base T (90/153); new base A (3/10); total (93/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.02e-01 | |||||||||||
Only 100 of 261 total aligned reads displayed.
CACGGCAGATATCAAAGAATTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAATCTTCTTTGATATCG > CP009273/3875441‑3875734 | cACGGCAGATATCAAAGAATTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGAtt > 2:370389/1‑148 (MQ=255) gATATCAAAGAATTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCgaga < 2:2401172/148‑1 (MQ=255) atatCAAAGAATTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGaa > 2:1736986/1‑148 (MQ=255) atatCAAAGAATTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGaa > 2:3558639/1‑148 (MQ=255) tatCAAAGAATTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAAt > 2:1547023/1‑148 (MQ=255) tatCAAAGAATTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAAt < 2:193237/148‑1 (MQ=255) tCAAAGAATTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCg > 1:817556/1‑148 (MQ=255) aaaGAATTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGt > 2:3016578/1‑148 (MQ=255) aaaGAATTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGt > 2:148078/1‑148 (MQ=255) gAATTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGc > 1:3081396/1‑148 (MQ=255) aTTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATAACCGAGAATCGGTAGCGt < 2:2045222/148‑1 (MQ=255) aTTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATGTCCATCTCGAGATCAGGACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGt < 2:2250005/148‑1 (MQ=255) ttGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAg < 1:1166672/148‑1 (MQ=255) tGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAgg < 1:23577/148‑1 (MQ=255) gcgcgcCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGga < 1:1320328/148‑1 (MQ=255) gcgcgcCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGga < 1:1167461/148‑1 (MQ=255) gcgcgcCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGga < 2:1878433/148‑1 (MQ=255) cgcCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGgacga < 1:3577798/148‑1 (MQ=255) ggAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGAGTACCGAGAATCGGTAGCGTAGGACGaccac < 2:335602/148‑1 (MQ=255) aCGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTa < 1:836159/148‑1 (MQ=255) cGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTaa < 1:785488/148‑1 (MQ=255) cGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTaa < 2:1491420/148‑1 (MQ=255) gtcgtcGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACg < 1:3054024/148‑1 (MQ=255) cgtcgCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGa < 1:2288168/148‑1 (MQ=255) cTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCt < 2:3694630/148‑1 (MQ=255) ccTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCa > 2:1097184/1‑148 (MQ=255) ccTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCa > 2:2441750/1‑148 (MQ=255) gCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCtg > 2:571327/1‑148 (MQ=255) gtgtGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCtgttgt < 1:880079/148‑1 (MQ=255) tgtgGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTa < 1:2930601/148‑1 (MQ=255) gtgGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAg < 1:3697874/148‑1 (MQ=255) ggCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCg < 2:2164977/148‑1 (MQ=255) gAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGttt > 1:2737496/1‑148 (MQ=255) aaCCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGtttt > 2:1267799/1‑148 (MQ=255) aaCCAGCGCAACACGTGCAACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGtttt > 1:2787550/1‑148 (MQ=255) ccAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTtaa > 1:3309236/1‑148 (MQ=255) cAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTtaat < 1:2578906/148‑1 (MQ=255) aGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTtaata < 2:2600213/148‑1 (MQ=255) gcgcAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTtaataa < 1:506189/148‑1 (MQ=255) gcgcAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTtaataa < 2:1296242/148‑1 (MQ=255) gcgcAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTtaataa < 1:2967126/148‑1 (MQ=255) gcgcAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTtaataa < 2:3420751/148‑1 (MQ=255) gcAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAAt < 2:3235257/148‑1 (MQ=255) acacGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCt > 2:702036/1‑148 (MQ=255) cacGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTc < 1:3362387/148‑1 (MQ=255) cacGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTc < 1:1781705/148‑1 (MQ=255) gCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGtt < 2:2508825/148‑1 (MQ=255) ccaTTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGACTCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTAc > 1:3450987/1‑148 (MQ=255) ccaTTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTAc > 2:2964928/1‑148 (MQ=255) caTTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACg < 2:1106898/148‑1 (MQ=255) tttCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATAACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGt < 1:243241/148‑1 (MQ=255) ttCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTa > 2:315961/1‑148 (MQ=255) ttCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATAACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTa > 1:2278350/1‑148 (MQ=255) tCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTaa > 2:2307338/1‑148 (MQ=255) tCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTaa < 1:3704079/148‑1 (MQ=255) ccATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTaaa < 1:1404771/148‑1 (MQ=255) aTCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAAtt > 2:47367/1‑148 (MQ=255) ctcGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTc > 1:1041805/1‑148 (MQ=255) gagaTCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATa < 2:3366811/148‑1 (MQ=255) gaTCAGTACCGGTCAGCGACAACGTACAGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAgg < 1:1901009/148‑1 (MQ=255) aTCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGTGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGt < 2:1779328/148‑1 (MQ=255) aTCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGt < 1:752228/148‑1 (MQ=255) aTCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGt > 2:3308023/1‑148 (MQ=255) aTCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGt > 2:2346424/1‑148 (MQ=255) tCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGtt > 1:685714/1‑148 (MQ=255) tCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGtt > 1:685181/1‑148 (MQ=255) tCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGtt > 1:3760705/1‑148 (MQ=255) tCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGtt < 2:3782359/148‑1 (MQ=255) aGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTa < 1:2215971/148‑1 (MQ=255) tACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACg > 1:3729373/1‑148 (MQ=255) tACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACg < 2:1152865/148‑1 (MQ=255) aCCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGa < 1:1515799/148‑1 (MQ=255) cGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATg < 1:2819229/148‑1 (MQ=255) ggTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGAGTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGa < 2:3635414/148‑1 (MQ=255) gCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTGCCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATg < 1:2131876/148‑1 (MQ=255) gCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATg < 2:2701230/148‑1 (MQ=255) gCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATg < 2:2805136/148‑1 (MQ=255) aCGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGa < 1:2774816/148‑1 (MQ=255) aCGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGa < 1:57570/148‑1 (MQ=255) cGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGAt < 2:3757655/148‑1 (MQ=255) tACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTa > 1:3200776/1‑148 (MQ=255) tACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTa > 1:1678363/1‑148 (MQ=255) aCCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTaa < 1:1036571/148‑1 (MQ=255) aCCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTaa < 2:68679/148‑1 (MQ=255) ccGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTaaa < 2:3481722/148‑1 (MQ=255) gTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTACCGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAAtt < 2:2843819/148‑1 (MQ=255) gTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTCCATAGGTTTACGATGACAATGTTCTGATTAAAtt < 1:3558639/148‑1 (MQ=255) gCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGaa > 1:2647973/1‑148 (MQ=255) aCCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGaaaaa > 1:3238263/1‑148 (MQ=255) ccTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAAt > 1:1276591/1‑148 (MQ=255) ccTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAAt > 1:3181157/1‑148 (MQ=255) aaCAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAAtcttct < 2:793868/148‑1 (MQ=255) aaCAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAAtcttct < 1:1629809/148‑1 (MQ=255) agcagATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAATCTTCTTTg < 2:685181/148‑1 (MQ=255) gcagATAACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAATCTTCTTTGa < 1:1771571/148‑1 (MQ=255) cagATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAATCTTCTTTGat > 2:3007221/1‑148 (MQ=255) cagATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAATCTTCTTTGat > 2:2427252/1‑148 (MQ=255) agATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAATCTTCTTTGata < 1:2233033/148‑1 (MQ=255) gATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAATCTTCTTTGatat > 1:2408923/1‑148 (MQ=255) aTTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAATCTTCTTTGATATc > 1:185815/1‑148 (MQ=255) | CACGGCAGATATCAAAGAATTTGCGCGCCGGAACGGTCGTCGCTCCTGGCTCGTGTGGCTGAACCAGCGCAACACGTGCCACCATTTCCATCTCGAGATCAGTACCGGTCAGCGACAACGTACCGTCAGCAACCTGTAACAGCAGATTACCGAGAATCGGTAGCGTAGGACGACCACCTAACGGACCGCTCACCTGTTGTAGCGGTTTTAATAAATGCTCACGTTCTACGGTAAATTTCATAGGTTTACGATGACAATGTTCTGATTAAATTTGAAAAATCTTCTTTGATATCG > CP009273/3875441‑3875734 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |