| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,890,151 | G→T | 11.3% | A6A (GCG→GCT) | yieH → | phosphoenolpyruvate and 6‑phosphogluconate phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,890,151 | 0 | G | T | 11.3% | 808.6 / 49.5 | 244 | A6A (GCG→GCT) | yieH | phosphoenolpyruvate and 6‑phosphogluconate phosphatase |
| Reads supporting (aligned to +/- strand): ref base G (97/119); new base T (13/15); total (110/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 245 total aligned reads displayed.
TATCGTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAATTAT > CP009273/3890005‑3890297 | tCGTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTa > 1:1725395/1‑148 (MQ=255) cGTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTAt < 1:2555470/148‑1 (MQ=255) gTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTAtt < 2:1681771/148‑1 (MQ=255) aCCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTc > 1:2139913/1‑148 (MQ=255) aCCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTc < 1:2498203/148‑1 (MQ=255) ccAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCg < 1:3263769/148‑1 (MQ=255) cAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGa < 2:3369331/148‑1 (MQ=255) aaTGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTg > 2:3140107/1‑148 (MQ=255) tGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCg > 2:1140297/1‑148 (MQ=255) gCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGa < 2:698724/148‑1 (MQ=255) aCAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACgg > 1:1115590/1‑148 (MQ=255) aCAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACgg < 1:3413071/148‑1 (MQ=255) tAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACg < 1:419859/148‑1 (MQ=255) ggCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCt > 1:3727196/1‑148 (MQ=255) ggCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCt > 1:1943575/1‑148 (MQ=255) gcgcGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTg > 2:909566/1‑148 (MQ=255) cgcgTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTgg < 1:133330/148‑1 (MQ=255) cgcgTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTgg < 2:3013556/148‑1 (MQ=255) gcgTTTGTGAGAGACTTTTTTATTGGATTCACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGt < 2:3808455/148‑1 (MQ=255) cgTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTc > 2:2626048/1‑148 (MQ=255) tttGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGa > 1:2718344/1‑148 (MQ=255) ttGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGAc < 2:3657882/148‑1 (MQ=255) ttGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGAc > 1:3783677/1‑148 (MQ=255) ttGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGAc > 2:2455571/1‑148 (MQ=255) gtgATAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAg < 1:2455811/148‑1 (MQ=255) gtgAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAg < 1:86704/148‑1 (MQ=255) agaCTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAg > 1:776717/1‑148 (MQ=255) aCTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTc > 1:3449463/1‑148 (MQ=255) ttttttATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCAt < 2:2616819/148‑1 (MQ=255) ttttttATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCAt < 2:2019216/148‑1 (MQ=255) ttttttATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCAt > 1:3095552/1‑148 (MQ=255) ttttttATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCAt < 2:2051764/148‑1 (MQ=255) tttATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTg < 1:2747220/148‑1 (MQ=255) ttATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGc < 2:2551651/148‑1 (MQ=255) ttATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGc < 2:63086/148‑1 (MQ=255) tATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGct < 2:3461304/148‑1 (MQ=255) ttGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGctct > 1:3570516/1‑148 (MQ=255) tGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCtctc > 1:314399/1‑148 (MQ=255) ttACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCa < 2:671312/148‑1 (MQ=255) ttACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCa > 2:3564692/1‑148 (MQ=255) tACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCat < 2:1835173/148‑1 (MQ=255) tACTTAGACGGAAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTACCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCat < 1:3296185/148‑1 (MQ=255) aCTTATACGGCAACGAGTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCata < 1:2857502/148‑1 (MQ=255) ttATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATg < 1:587557/148‑1 (MQ=255) aCGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTCAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAAc > 2:2586168/1‑148 (MQ=255) ggCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGa < 2:2139913/148‑1 (MQ=255) cAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATg > 2:2350110/1‑148 (MQ=255) cAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATg > 2:2812231/1‑148 (MQ=255) cGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGttt < 1:1661235/148‑1 (MQ=255) aTTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCa > 2:2593328/1‑148 (MQ=255) aTTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCa > 2:604766/1‑148 (MQ=255) ttgcgttgcgCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAg > 1:1227460/1‑148 (MQ=255) gcgttgcgCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGa < 2:1804965/148‑1 (MQ=255) tgcgCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAAttt > 1:2608259/1‑148 (MQ=255) aaTCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTAtt < 1:1855117/148‑1 (MQ=255) aaTCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTAtt < 2:810411/148‑1 (MQ=255) aTCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTa > 1:1998489/1‑148 (MQ=255) aTCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTa > 2:176358/1‑148 (MQ=255) cGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACg < 1:1871390/148‑1 (MQ=255) ggCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGc < 2:1115590/148‑1 (MQ=255) tctACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCg > 1:2929284/1‑148 (MQ=255) tctACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCg < 1:2965033/148‑1 (MQ=255) aaaCGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGa > 2:513185/1‑148 (MQ=255) aaCGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGaa < 1:1391663/148‑1 (MQ=255) aaCGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGaa > 1:2369548/1‑148 (MQ=255) aaCGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGaa > 2:3735743/1‑148 (MQ=255) cGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAaga < 2:772131/148‑1 (MQ=255) ttAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAgg > 2:320361/1‑148 (MQ=255) ttAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAgg > 2:320660/1‑148 (MQ=255) tAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGt > 1:1626699/1‑148 (MQ=255) cTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTc > 2:2246899/1‑148 (MQ=255) gATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACTGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCaa < 2:517091/148‑1 (MQ=255) gATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCaa < 2:1410490/148‑1 (MQ=255) gATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCaa < 2:3725163/148‑1 (MQ=255) aaaaaGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGt < 2:1362795/148‑1 (MQ=255) aaaggaaaggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGttt > 1:3511211/1‑148 (MQ=255) aggaaaggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCa > 1:2197284/1‑148 (MQ=255) ggaaaggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCaa > 1:511032/1‑148 (MQ=255) aaggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAgg < 2:1048344/148‑1 (MQ=255) aggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGgt < 1:2348184/148‑1 (MQ=255) ggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGgtg < 1:572507/148‑1 (MQ=255) ggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGgtg > 1:502267/1‑148 (MQ=255) ggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGgtg > 2:861875/1‑148 (MQ=255) gCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGgtgt < 1:693204/148‑1 (MQ=255) aTGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTaa > 1:1276596/1‑148 (MQ=255) gTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTaaaa < 2:1246843/148‑1 (MQ=255) gTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTaaaa < 2:393440/148‑1 (MQ=255) cccGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACt > 2:1719509/1‑148 (MQ=255) ccGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTg < 1:909566/148‑1 (MQ=255) cGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGt < 2:3633472/148‑1 (MQ=255) cGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGt < 2:896525/148‑1 (MQ=255) tAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGa > 1:1078776/1‑148 (MQ=255) gAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGaaa > 1:3381015/1‑148 (MQ=255) gAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGaaa > 1:3044337/1‑148 (MQ=255) aaGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAGTTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAAt < 1:3684105/148‑1 (MQ=255) aaGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAAt > 1:1409628/1‑148 (MQ=255) gCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAATTa > 2:1403010/1‑148 (MQ=255) gCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAATTa > 1:2359511/1‑148 (MQ=255) cGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAATTAt < 2:2894260/148‑1 (MQ=255) cGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAATTAt < 1:2573473/148‑1 (MQ=255) | TATCGTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAATTAT > CP009273/3890005‑3890297 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |