| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,603,125 | A→C | 9.5% | T300P (ACG→CCG) | yjjU → | putative patatin‑like family phospholipase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,603,125 | 0 | A | C | 9.5% | 339.6 / 4.3 | 166 | T300P (ACG→CCG) | yjjU | putative patatin‑like family phospholipase |
| Reads supporting (aligned to +/- strand): ref base A (59/85); new base C (20/2); total (79/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.16e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 174 total aligned reads displayed.
CAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACC > CP009273/4602978‑4603272 | cAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCa < 2:3632642/148‑1 (MQ=255)cAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCa < 2:3632651/148‑1 (MQ=255)cAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTAGCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCa < 2:2949176/148‑1 (MQ=255) aTTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACg > 2:1690153/1‑148 (MQ=255) aTTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTGCTC‑GCCCCg > 2:2913402/1‑148 (MQ=255) tttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTACTA‑GCCACgg > 1:3365071/1‑148 (MQ=255) ttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGt < 1:2531370/148‑1 (MQ=255) ttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGt < 1:2458629/148‑1 (MQ=255) ttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGt < 2:2638834/148‑1 (MQ=255) ttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGt < 1:1561166/148‑1 (MQ=255) agaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTTCTC‑GCCACGGGTGGCaa > 1:914285/1‑148 (MQ=255) agaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCTC‑GCCACGGTTGGCaa > 1:2828982/1‑148 (MQ=255) gaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAg < 1:1290307/148‑1 (MQ=255) gaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTGCTC‑GCCCCGGTTGGGAAg > 1:1463992/1‑148 (MQ=255) aaaCCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTTCGC‑GCCCCGGTTGGCCAGc > 1:3376627/1‑148 (MQ=255) aaCCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCt < 1:1518284/148‑1 (MQ=255) accaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGcga > 2:253178/1‑146 (MQ=255) ccaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTAt > 2:2474463/1‑148 (MQ=255) ccaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTTCTCGGCCCCGGTGGGCagcgct > 1:3514562/1‑143 (MQ=255) caccGGGCAAGCTGCGGATATTCGTAAGTTCTCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCAGGTTTGGCAAGCTAtt < 2:1273957/148‑1 (MQ=255) caccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTAtt < 2:3179469/148‑1 (MQ=255) accGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTa < 1:618248/148‑1 (MQ=255) accGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTa < 1:2389621/148‑1 (MQ=255) ccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTaa < 1:1986672/148‑1 (MQ=255) gCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGa < 2:938222/148‑1 (MQ=255) gCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTACTA‑GCCCCCGGTGGGCAGCCATTAAATGaaaaa > 1:2271571/1‑148 (MQ=255) gCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTC‑GCCACGGTTGGCAAGCGATTAACTGaaaaa > 2:878385/1‑148 (MQ=255) gCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAgcg > 2:3793493/1‑148 (MQ=255) gCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAgcg < 1:989038/148‑1 (MQ=255) tatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCt < 2:1782984/148‑1 (MQ=255) tatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTACGC‑GCCCCCGTTGGCAACCGCATAACGGAAAAAAcgccccg > 1:3719176/1‑145 (MQ=255) tatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTACAC‑GCCCCGGGTGGCAACCGATTAACGTAAAAAAccccgcg > 1:3719568/1‑147 (MQ=255) atTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTTCTC‑GCCACGGTTGGCAAGCGATTAAATTAAAAATCGCCGCtt > 1:200724/1‑148 (MQ=255) atTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAATCGCCGCtt > 2:2928043/1‑148 (MQ=255) atTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTC‑GCCACGGTTGGCAAGCTATTAAATGAAAAAGCGCCGCtt > 2:494628/1‑148 (MQ=255) aaaTTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCAC‑GCCACGGTTGGCAAGCTATTAACGGAAAAAGCGCCGCTTACCCg > 2:913834/1‑148 (MQ=255) aaaTTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTAATC‑GCCACGGTTGGCAAGCGATTAACTGAAAAAACGCCCCTTACCCg > 2:1379300/1‑148 (MQ=255) aaTTTATCCGCCGAAGAAATTAATTAGTATGGCGCTTGGATGTCGGATTCCGGCGCTGCGTTAAGAATATAAACTTGGGCTTTTATGCGGTCGTTTTTTCCTC‑GCCACGGTTGGCAAGATATTAACTTAAAAAGCGCCGCTTACCCGc < 2:650759/148‑1 (MQ=255) aTTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCTTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGcc < 2:983184/148‑1 (MQ=255) ttATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCAt < 2:1826163/148‑1 (MQ=255) tATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATc < 2:1476108/148‑1 (MQ=255) ccgccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTgg > 2:3437189/1‑148 (MQ=255) ccgccgAAGCCATTACATAGGATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTgg < 2:2176494/148‑1 (MQ=255) cgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCATGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGcc < 2:845411/148‑1 (MQ=255) cgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGcc < 2:845348/148‑1 (MQ=255) ccaaGCAATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCTTGAAGACTATAAACTTGGGCGTTTATGGGGTCTTTATTTCCAC‑GCCACGGTGGGAAAGATATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGcc < 1:417308/146‑1 (MQ=255) gAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCTG‑CCCCCGGGTGGGAAGCTATTAACAGAAAAAACCCCGCTTACCCGCCCACTGGTGGCa > 1:1187840/1‑148 (MQ=255) aGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgt > 2:2687641/1‑148 (MQ=255) aGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACAC‑CCCACCGTTTTCAACAGATTAAATGAAAAAGCGCCCCTAACCCCCCATCTGGTGCCacg > 1:2195477/1‑146 (MQ=255) ccATTACATCTTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCTTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATAAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtgg < 1:2758332/148‑1 (MQ=255) ccATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCAGGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtgg < 1:3042964/148‑1 (MQ=255) ccATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTA‑GCCACCGTTTGCAAGCGATTAAATGAAAAATCGCCGCGTACCCGCCCACGGGTGcccgggg > 1:3761186/1‑143 (MQ=255) tAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACAA‑GCCCCGGTTGGCAAGCTATTAAATGAAAAATCGCCCCCTACCCCCCAACTGGTGCCAGTGGTGACGCCg > 2:1552878/1‑148 (MQ=255) aTCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAAATGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAAt < 1:2951306/148‑1 (MQ=255) cgcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTGGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGAt < 1:428742/148‑1 (MQ=255) tGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTc > 2:1865782/1‑148 (MQ=255) ggCAGTCGGATTCCGGCGCTGCGTTAAGACTATAACCTTGGGCGTTTATGCGGTCGTTATTCCCCC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCa < 1:2035153/148‑1 (MQ=255) ggCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCa < 2:152156/148‑1 (MQ=255) ggCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCa < 2:975408/148‑1 (MQ=255) ggCAGTCGGATTCCGGCGCTGCGTGAAGAATATAAACTTGGGGTTTTATGGGGTCGTTATTGCCTC‑GCCAGGGTTGGCAAGCTATTAACTCAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCa < 1:1690153/148‑1 (MQ=255) tCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTTCTC‑CCCCCCGTTGGCCAGCGAATTAATGTAAAAGCGCCGCGTACCCCCCAACAGGTGGCAGTGGTGTCGCCGGGATCGATTGTCAttacc > 2:977307/1‑145 (MQ=255) tCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTGCTC‑GCCACGGGTGGGAAGCAATTAAATGAAAAAGCGCCGCTTACCCGCCAAATGGTGGCAGTGGTGTCGCCGGAATAGATTGTCATTCCg > 2:1342258/1‑148 (MQ=255) ggATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGcc < 1:2437581/148‑1 (MQ=255) ttCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTAATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCCCTTACCCGCCAAATGGTGCCAGTGGTGACGCCGGAATCGAATGTCAGTCCGCCTgc > 2:2852781/1‑148 (MQ=255) tCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTCTTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTgcg > 2:2744649/1‑148 (MQ=255) gCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCCCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTTTCAATACGCCTGCGCCCGTCGcc > 2:837047/1‑148 (MQ=255) gCGTGAAGACTATAAACTTGGGCGTTTATGCGGTAGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGcc > 2:2389329/1‑148 (MQ=255) gaagaaTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGAAAGCTATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACg < 1:2951978/148‑1 (MQ=255) gAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACg < 1:2150959/148‑1 (MQ=255) aCTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTC‑GCCACGGTTTGCAACCTATTAACTGAAAAAGCGCCGCGTAACCCCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATAc > 2:1206879/1‑148 (MQ=255) aaCTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGt < 2:1937860/148‑1 (MQ=255) aCTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCGATTAACTGAAAAAGCGCCGCTTACCCGCCATATGGTGCCCGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGAAACGCTGGtt > 2:2131863/1‑148 (MQ=255) cTTGGGCGTTTATGCGGTCGTTTTTTACGC‑CCCACCGGTTGCAAGCGATTAACTTAAAAATCGCCGCGTACCCCCCCACAGGTGCCCCTGGGGACGCCCGAAAAGAATTTGATTACGCCTTCGCCCCTCGCCCACCAAAAGCAGGttt > 2:355274/1‑147 (MQ=255) gggCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGTCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCg < 2:1969004/148‑1 (MQ=255) gCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGaa < 1:2041263/148‑1 (MQ=255) gCGTTGATGCGGTCGTTATGTCCGC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGaa < 2:2734322/148‑1 (MQ=255) cttttATGGGGTCTTTTTTTCCTC‑GCCACGTTTGGCAAGCTATAAACTCAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAg < 1:1943269/146‑1 (MQ=255) ttATGCGGTCTTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGa < 1:3268927/148‑1 (MQ=255) ttATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCCGAATCGATTGTAATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGa > 2:3485283/1‑148 (MQ=255) tCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAAACGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCt > 2:3597389/1‑148 (MQ=255) ggTTATTTCCTC‑GCCACGGTTGGCAAGATATTAACTCAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGAGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTc < 1:449870/147‑1 (MQ=255) cGTTATTTCCTC‑GCCCCGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGAGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTc < 1:447845/148‑1 (MQ=255) cGTTACTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAATAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCGGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTc < 2:1579827/148‑1 (MQ=255) ttATTTCCTC‑GCCAGGGTTGGAAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCg < 1:1710038/148‑1 (MQ=255) tATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGACGTGAGCGACGCTCCGc > 2:3016083/1‑148 (MQ=255) tATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc > 1:2113680/1‑148 (MQ=255) tATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc > 2:2470237/1‑148 (MQ=255) tATTTCCTC‑GCCACGGTTGGCAAGCTATGAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCTCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc > 1:2929852/1‑148 (MQ=255) tATTTCCCC‑GCCACGGTTGGCAAGCTATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc < 1:1379300/148‑1 (MQ=255) tttCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAg < 2:2232960/148‑1 (MQ=255) tttCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAg < 2:400056/148‑1 (MQ=255) tttCCTC‑GCCACGGTTGGAAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAg < 1:1300465/148‑1 (MQ=255) cgc‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGa < 1:2744649/146‑1 (MQ=255) tC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa < 2:3376544/148‑1 (MQ=255) c‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAAc > 2:1050852/1‑148 (MQ=255) gCCACGGTTGGCAAGCTATTACCTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACg < 2:3422552/148‑1 (MQ=255) cACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGACTCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAc > 2:3789641/1‑148 (MQ=255) cACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAc > 2:1236348/1‑148 (MQ=255) aCGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAcc > 1:847823/1‑148 (MQ=255) aCGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAcc > 1:328063/1‑148 (MQ=255) | CAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTC‑GCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACC > CP009273/4602978‑4603272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |