Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 4,617,341 C→A 100% F70L (TTC→TTA)  nadR → trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,617,3410CA100.0% 568.1 / NA 172F70L (TTC→TTA) nadRtrifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (99/73);  total (99/73)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 172 total aligned reads displayed.

CTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTCGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCG  >  CP009273/4617196‑4617485
                                                                                                                                                 |                                                                                                                                                
cTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAgg                                                                                                                                                >  1:1056477/1‑148 (MQ=255)
   aTGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTaa                                                                                                                                             >  2:970501/1‑148 (MQ=255)
     gCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGTGTTGCACCGTTTTTTGGGGCTTGAGTTTCCTCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGt                                                                                                                                           <  2:2240750/148‑1 (MQ=255)
     gCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCTCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGt                                                                                                                                           <  2:2829125/148‑1 (MQ=255)
     gCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCTCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGt                                                                                                                                           <  2:2240747/148‑1 (MQ=255)
     gCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGt                                                                                                                                           >  1:536029/1‑148 (MQ=255)
     gCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGt                                                                                                                                           >  1:2454678/1‑148 (MQ=255)
       cAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTc                                                                                                                                         <  2:1001047/148‑1 (MQ=255)
          cGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTAc                                                                                                                                      <  2:1450423/148‑1 (MQ=255)
             tATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCa                                                                                                                                   <  2:2908074/148‑1 (MQ=255)
             tATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCa                                                                                                                                   <  2:3413003/148‑1 (MQ=255)
             tATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATCGGTGTCGTATTAGGTAAGTTCTACCCa                                                                                                                                   >  1:332935/1‑148 (MQ=255)
              aTGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCAc                                                                                                                                  >  2:1974917/1‑148 (MQ=255)
              aTGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCAc                                                                                                                                  >  1:3112540/1‑148 (MQ=255)
                 aCCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGc                                                                                                                               >  2:2477769/1‑148 (MQ=255)
                  ccAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCa                                                                                                                              <  2:3559582/148‑1 (MQ=255)
                   cAAAGGGTATTTCAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCAt                                                                                                                             <  2:2166625/148‑1 (MQ=255)
                   cAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCAt                                                                                                                             >  2:1588108/1‑148 (MQ=255)
                      aGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATAcc                                                                                                                          >  1:2732392/1‑148 (MQ=255)
                       gggTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTTGGGCGTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTATACCCACTGCATACCg                                                                                                                         >  2:239119/1‑148 (MQ=255)
                       gggTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCg                                                                                                                         >  1:1156433/1‑148 (MQ=255)
                        ggTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCgg                                                                                                                        >  1:99686/1‑148 (MQ=255)
                        ggTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCgg                                                                                                                        >  1:164596/1‑148 (MQ=255)
                        ggTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTCGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTACCCGGCAGAAGAAAACCATCCGTGTCGTATTAGGTAAGTTCTAACCACAGCATACCgg                                                                                                                        >  1:3572293/1‑148 (MQ=255)
                         gTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGa                                                                                                                       >  2:3271613/1‑148 (MQ=255)
                           aTTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACa                                                                                                                     >  2:2239830/1‑148 (MQ=255)
                            tttAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACat                                                                                                                    >  1:1365150/1‑148 (MQ=255)
                                  ccAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTAc                                                                                                              >  1:3637433/1‑148 (MQ=255)
                                   cAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTAcc                                                                                                             <  1:2896599/148‑1 (MQ=255)
                                     gTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCtt                                                                                                           >  1:840430/1‑148 (MQ=255)
                                     gTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCtt                                                                                                           >  1:1698289/1‑148 (MQ=255)
                                         cTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATcc                                                                                                       >  1:2275922/1‑148 (MQ=255)
                                         cTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATcc                                                                                                       <  2:1245440/148‑1 (MQ=255)
                                         cTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATcc                                                                                                       >  1:2275884/1‑148 (MQ=255)
                                            aaTGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAgc                                                                                                    >  1:3556090/1‑148 (MQ=255)
                                             aTGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAgcg                                                                                                   >  1:3663041/1‑148 (MQ=255)
                                              tGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAgcgc                                                                                                  >  1:1433083/1‑148 (MQ=255)
                                              tGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAgcgc                                                                                                  >  2:3659127/1‑148 (MQ=255)
                                               gCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAgcgcg                                                                                                 >  2:2797237/1‑148 (MQ=255)
                                                  aaaaTCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCt                                                                                              <  2:3122452/148‑1 (MQ=255)
                                                    aaTCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGt                                                                                            >  2:848735/1‑148 (MQ=255)
                                                     aTCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTa                                                                                           >  1:1997634/1‑148 (MQ=255)
                                                      tCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAg                                                                                          >  2:1660134/1‑148 (MQ=255)
                                                            gCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGt                                                                                    <  2:800795/148‑1 (MQ=255)
                                                              cccAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTg                                                                                  >  2:1486316/1‑148 (MQ=255)
                                                               ccAGCGCGCAACAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGa                                                                                 <  1:1766313/148‑1 (MQ=255)
                                                               ccAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGa                                                                                 <  2:1681511/148‑1 (MQ=255)
                                                               ccAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGa                                                                                 <  1:1981033/148‑1 (MQ=255)
                                                               ccAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGATTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGa                                                                                 <  1:1981036/148‑1 (MQ=255)
                                                                cAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGAc                                                                                >  1:1911543/1‑148 (MQ=255)
                                                                 aGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACg                                                                               <  2:1716465/148‑1 (MQ=255)
                                                                 aGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACg                                                                               <  2:1716477/148‑1 (MQ=255)
                                                                   cgcgcAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAg                                                                             >  2:1790037/1‑148 (MQ=255)
                                                                   cgcgcAAAAGCTGGAGCCTTTGCACCGTTTTTTGCGGCTTGAGTTTCCCCGGCAGAAGAAAACCATCGGTGTCGTAGTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCATATCAAGCGCGCCTCTAGACAGCTTGACGAg                                                                             >  2:2489022/1‑148 (MQ=255)
                                                                     cgcAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCt                                                                           >  2:178554/1‑148 (MQ=255)
                                                                        aaaaGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCa                                                                        >  1:1332882/1‑148 (MQ=255)
                                                                         aaaGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGATGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACACACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCat                                                                       <  1:2874645/148‑1 (MQ=255)
                                                                         aaaGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCat                                                                       >  2:2340619/1‑148 (MQ=255)
                                                                         aaaGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCat                                                                       <  1:2874289/148‑1 (MQ=255)
                                                                         aaaGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCat                                                                       >  1:665566/1‑148 (MQ=255)
                                                                          aaGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCata                                                                      >  1:1087399/1‑148 (MQ=255)
                                                                           aGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCatat                                                                     <  2:717967/148‑1 (MQ=255)
                                                                           aGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCatat                                                                     >  2:531892/1‑148 (MQ=255)
                                                                             cTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCa                                                                   <  1:1211932/148‑1 (MQ=255)
                                                                             cTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCa                                                                   <  1:1213072/148‑1 (MQ=255)
                                                                             cTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCa                                                                   <  2:1056477/148‑1 (MQ=255)
                                                                              tGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCAt                                                                  <  1:2762386/148‑1 (MQ=255)
                                                                                      ttGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGtt                                                          <  2:1264533/148‑1 (MQ=255)
                                                                                      ttGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGtt                                                          >  1:3057295/1‑148 (MQ=255)
                                                                                       tGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGttt                                                         <  1:2667329/148‑1 (MQ=255)
                                                                                         cACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTg                                                       <  2:781391/148‑1 (MQ=255)
                                                                                         cACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTg                                                       >  1:725017/1‑148 (MQ=255)
                                                                                          aCCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACTAGCTGCATATCATTATGGGTTTTGa                                                      >  2:1281111/1‑148 (MQ=255)
                                                                                             gTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGa                                                   <  2:1637399/148‑1 (MQ=255)
                                                                                                  ttGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATAccc                                              >  1:3510395/1‑148 (MQ=255)
                                                                                                   tGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCg                                             >  2:51408/1‑148 (MQ=255)
                                                                                                       gCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGAc                                         >  2:2960052/1‑148 (MQ=255)
                                                                                                       gCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGAc                                         >  2:3286977/1‑148 (MQ=255)
                                                                                                          tGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACcgc                                      >  2:360106/1‑148 (MQ=255)
                                                                                                          tGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACcgc                                      >  2:359696/1‑148 (MQ=255)
                                                                                                            aGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACcgcgc                                    >  2:1492256/1‑148 (MQ=255)
                                                                                                             gTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACcgcgcg                                   <  1:1486316/148‑1 (MQ=255)
                                                                                                             gTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACcgcgcg                                   >  1:1248031/1‑148 (MQ=255)
                                                                                                              tttCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCgt                                  >  2:2954831/1‑148 (MQ=255)
                                                                                                                tCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCgttg                                >  2:1484161/1‑148 (MQ=255)
                                                                                                                tCCCCGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCgttg                                <  2:2197826/148‑1 (MQ=255)
                                                                                                                   ccGGCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTc                             >  2:3321919/1‑148 (MQ=255)
                                                                                                                     ggCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGa                           <  2:3109868/148‑1 (MQ=255)
                                                                                                                      gCAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGaa                          >  2:3498668/1‑148 (MQ=255)
                                                                                                                      gCAGAAGAAAACGATCGGTGTCGTATTAGATAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGaa                          >  1:411189/1‑148 (MQ=255)
                                                                                                                       cAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAg                         <  2:1266084/148‑1 (MQ=255)
                                                                                                                       cAGAAGAAAACGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAg                         <  1:3296249/148‑1 (MQ=255)
                                                                                                                           agaaAACGATCGGTGTCGTATTAGGTAGGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAg                     >  2:2873904/1‑148 (MQ=255)
                                                                                                                               aaCGATCGGTGTCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGcc                 <  2:1856283/148‑1 (MQ=255)
                                                                                                                                       gtgtCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCgca         >  2:609619/1‑148 (MQ=255)
                                                                                                                                        tgtCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCgcag        >  2:2050005/1‑148 (MQ=255)
                                                                                                                                         gtCGTATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCgcagc       <  2:2813849/148‑1 (MQ=255)
                                                                                                                                             tATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGcc   >  2:3530384/1‑148 (MQ=255)
                                                                                                                                             tATTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGcc   >  1:2925583/1‑148 (MQ=255)
                                                                                                                                              aTTAGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCg  >  1:2513009/1‑148 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
CTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTCGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCG  >  CP009273/4617196‑4617485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑