| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 361,692 | G→T | 38.2% | Q18K (CAG→AAG) | lacI ← | DNA‑binding transcriptional repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 361,692 | 0 | G | T | 38.2% | 11431.4 / inf | 8496 | Q18K (CAG→AAG) | lacI | DNA‑binding transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base G (2438/2807); new base T (1575/1673); total (4016/4480) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.36e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 8637 total aligned reads displayed.
CAACGCCAATCAGCAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCGCCATTCGATGGTGTCAACGTAAATGCATGC > CP009273/361545‑361836 | aCGCCAATCAGCAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGGAAAACGGTCTGa > 1:682030/1‑148 (MQ=255) cGCCAATCAGCAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTCATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATa > 2:2840990/1‑148 (MQ=255) cGCCAATCAGCAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAAAGGTCTGATa > 1:3070726/1‑148 (MQ=255) cGCCAATCAGCAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCGGGTTCACCACGCGGG‑AAACGGTCTGATa > 2:732419/1‑148 (MQ=255) ccAATCAGCAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCTCCACGCGGG‑AAACGGTCTGATAag < 2:215037/148‑1 (MQ=255) ccAATCAGCAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑TCACGGTCTGATAag > 1:1571562/1‑148 (MQ=255) aTCAGCAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAgaga > 1:1215099/1‑148 (MQ=255) aTCAGCAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTGTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAgaga < 1:2114973/148‑1 (MQ=255) tCAGCAACGACAGTTTGCCCGCCAGTTGTAGTGCCACGCGGATGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGac < 2:3427333/148‑1 (MQ=255) cAGCAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGGCAAACGGTCGGATAAGAGac > 1:1000396/1‑148 (MQ=255) cAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTTATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGacac > 2:3500734/1‑146 (MQ=255) cGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCa > 1:2803639/1‑148 (MQ=255) aCTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATa > 1:3487161/1‑148 (MQ=255) aCTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATa < 2:785715/148‑1 (MQ=255) cTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACGTTTTCCCGCGTTTTCGCAGAAAAGTGGCTGGCCTGGTTCACCACGCGGG‑AAACCGTCTTATAAGAGACACCGGCATAc > 1:9967/1‑148 (MQ=255) tGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATAct > 1:1855155/1‑148 (MQ=255) gTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATActc > 1:1148435/1‑148 (MQ=255) tttGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATActct > 2:658882/1‑148 (MQ=255) ttGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTg > 1:2465753/1‑148 (MQ=255) gCCAGTTGTTGTGCCACGTGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACAt < 2:3351609/148‑1 (MQ=255) ccAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAACCGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCGTATAAGCGACACCGGCCTAGTCTGCGACATc > 2:3634864/1‑148 (MQ=255) cAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCg < 2:1887341/148‑1 (MQ=255) cAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCg > 2:1571640/1‑148 (MQ=255) aGTTGTTGTGCCACGCGGTTGGGAATGTCATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGt < 1:2927667/148‑1 (MQ=255) aGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCTCCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGt < 2:2702736/148‑1 (MQ=255) gttgtaGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGta < 2:2769774/148‑1 (MQ=255) ttgttgTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTGCCGCGTTTTAGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACACAGCGACATCGtat > 1:752677/1‑148 (MQ=255) ttgttgTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGtat > 2:1282149/1‑148 (MQ=255) ttgttgTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGtat > 2:170849/1‑148 (MQ=255) ttgttgTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTACCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑GACCGGGCGGATAAGAGACACCGGCCTACTCTGCGACATCGtct > 1:2583564/1‑146 (MQ=255) ttgtGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAAc > 2:2985531/1‑148 (MQ=255) gCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTa < 1:2387707/148‑1 (MQ=255) aCGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCTCCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTg < 2:202572/148‑1 (MQ=255) cgcgGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTgg < 2:1439442/148‑1 (MQ=255) ttGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGGAAAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTc > 2:2578518/1‑148 (MQ=255) ttGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGtttaa > 1:252770/1‑146 (MQ=255) ttGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTca < 1:2863523/148‑1 (MQ=255) ttGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCAATTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTca > 2:429460/1‑148 (MQ=255) tGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCTCGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTcac < 1:1980144/148‑1 (MQ=255) tGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTcac > 1:2324669/1‑148 (MQ=255) tGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTcac > 1:1917685/1‑148 (MQ=255) ggAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACAt > 1:2673094/1‑148 (MQ=255) ggAATGTAAGTCAGCTCCGCCATCGCCGCTTCCACTTTGTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACAt < 2:1365497/148‑1 (MQ=255) gAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTATCACAtt < 1:337524/148‑1 (MQ=255) tGTAATTCAGCTCCGCCATCGCAGCTTCCACTTTTTCACGCGTTTTATCAGAAACGTTGGTGGCCTGGTTAACAACCAGGG‑AAACCGTCTGATAAGAAACAACGGCATAATCTTCGACATCGTATAACGTTAATTGTTTCAAATTcac > 1:3561321/1‑148 (MQ=255) aaTTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGGAAAACGGGCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTcacca > 1:604659/1‑148 (MQ=255) ttCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCAccc < 2:1500082/148‑1 (MQ=255) tCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGGAAAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCAccc > 1:2242922/1‑148 (MQ=255) tCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCt > 2:1963960/1‑148 (MQ=255) gCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTAGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACAACCTATAACGTTACAGGTTTCACATAAACCACCCTGaa > 1:3303302/1‑148 (MQ=255) cTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAAt < 2:1763106/148‑1 (MQ=255) tCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAAtt < 1:2047687/148‑1 (MQ=255) cGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCTCCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGa < 1:1504451/148‑1 (MQ=255) cGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGa < 2:2637918/148‑1 (MQ=255) cATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGActc > 2:1157511/1‑148 (MQ=255) cATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGActc < 2:610182/148‑1 (MQ=255) aTCGCCGCTTCCACTTTTTACCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCAACAAGCGGG‑GAACGGTCTTATAAGATACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTAACCACCCTGAATTTActct > 1:844037/1‑148 (MQ=255) tCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCTCCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGActctc < 2:1071093/148‑1 (MQ=255) cgccgcTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGActctct < 2:1832565/148‑1 (MQ=255) gccgcTTCCACTATTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCTCCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGTGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCtt < 2:2084794/148‑1 (MQ=255) cgcTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTcc > 1:136713/1‑148 (MQ=255) cTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCgg > 2:487706/1‑148 (MQ=255) tCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGgc > 1:1072367/1‑148 (MQ=255) aCTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTCTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCt < 1:3626279/148‑1 (MQ=255) aCTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTATCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCt > 1:2741680/1‑148 (MQ=255) cTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTa > 2:3055014/1‑148 (MQ=255) tttttCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTAt > 2:122473/1‑148 (MQ=255) tttttCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTAt > 1:2995304/1‑148 (MQ=255) cccGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGc > 2:941788/1‑148 (MQ=255) cgcgTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCa > 2:3276936/1‑148 (MQ=255) cgTTTTCGCAGAAACGTGGCTGGCCTGGTTCTCCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATa > 2:545136/1‑148 (MQ=255) cgTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATa < 1:3230289/148‑1 (MQ=255) ttCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACcgc > 1:1296819/1‑148 (MQ=255) aaaCGTGGCTGGCCTGGTTCTCCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGt < 2:2232938/148‑1 (MQ=255) aaaCGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGt > 1:3759445/1‑148 (MQ=255) aaaCGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGt > 2:868286/1‑148 (MQ=255) aaaCGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGt > 2:2516067/1‑148 (MQ=255) aaCGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGtt < 1:470749/148‑1 (MQ=255) aCGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGttt > 2:320093/1‑148 (MQ=255) aCGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGttt < 1:2185338/148‑1 (MQ=255) ggctggcCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTgca < 1:1790756/148‑2 (MQ=255) gctggcCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTgcac > 1:395469/1‑146 (MQ=255) ggcCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCAt < 2:2304205/148‑1 (MQ=255) gcCTGGTTCTCCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCAtt > 1:3145747/1‑148 (MQ=255) gcCTGGTTCACCACGCGGGAAAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCAt < 2:3736829/148‑1 (MQ=255) gcCTGGTTCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCAtt > 1:909939/1‑148 (MQ=255) tctccacGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGgt < 1:1724303/145‑1 (MQ=255) tCACCACGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGgt > 1:1642617/1‑148 (MQ=255) tCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGgt > 2:2903025/1‑148 (MQ=255) cacGCGGG‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGGTGTCa > 1:540071/1‑148 (MQ=255) gcgGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGGTGTCAAtt > 1:3431562‑M2/1‑146 (MQ=255) ggg‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGGTGTCAAttaa > 1:1440841‑M2/1‑144 (MQ=255) ggg‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGGTGTCAAttaa > 2:3806236‑M2/1‑144 (MQ=255) gg‑AAACGGTCTTATCAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGGTGTCAAttaat > 2:2376022‑M2/1‑143 (MQ=255) gg‑AAACGGTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGGTGTCAAttaat > 2:3129001‑M2/1‑143 (MQ=255) aaaacGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGGTGTCAAttaatt < 2:1633709‑M2/147‑7 (MQ=255) aaaCGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGGTGTCAAttaatta > 2:3696133‑M2/1‑141 (MQ=255) aCGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGGTGTCAAttaattaaa > 1:3698114‑M2/1‑139 (MQ=255) gTCTTATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGGTGTCAAttaattaaaggc > 2:3562921‑M2/1‑136 (MQ=255) gTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCACCATTCGATGGTGTCAAttaattaaaggc < 2:2449863‑M2/148‑13 (MQ=255) | CAACGCCAATCAGCAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGG‑AAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCGCCATTCGATGGTGTCAACGTAAATGCATGC > CP009273/361545‑361836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |