Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 950,239 C→A 8.3% intergenic (‑317/+89) focA ← / ← ycaO formate channel/ribosomal protein S12 methylthiotransferase accessory factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273950,2390CA 8.3% 729.3 / 2.8 239intergenic (‑317/+89)focA/ycaOformate channel/ribosomal protein S12 methylthiotransferase accessory factor
Reads supporting (aligned to +/- strand):  ref base C (123/86);  new base A (2/28);  total (125/114)
Fisher's exact test for biased strand distribution p-value = 4.19e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 241 total aligned reads displayed.

ACAAATGAGTTGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACG  >  CP009273/950093‑950386
                                                                                                                                                  |                                                                                                                                                   
 cAACTGAGTTGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCaa                                                                                                                                                   <  2:2447351/148‑1 (MQ=255)
 cAAATGAGTTGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCaa                                                                                                                                                   >  2:3743317/1‑148 (MQ=255)
 cAAATGAGTTGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCaa                                                                                                                                                   >  2:504794/1‑148 (MQ=255)
   aaTGAGTTGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAat                                                                                                                                                 <  2:240324/148‑1 (MQ=255)
   aaTGAGTTGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAat                                                                                                                                                 <  2:3794776/148‑1 (MQ=255)
    aTGAGTTGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCaaa                                                                                                                                                  >  2:3167406/1‑146 (MQ=255)
      gAGTTGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAatata                                                                                                                                              <  2:2860514/148‑1 (MQ=255)
      gAGTTGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAatata                                                                                                                                              >  1:553269/1‑148 (MQ=255)
         ttGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGt                                                                                                                                           <  1:3019120/148‑1 (MQ=255)
          tGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTa                                                                                                                                          >  2:1014454/1‑148 (MQ=255)
          tGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTa                                                                                                                                          >  2:1014364/1‑148 (MQ=255)
          tGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTa                                                                                                                                          <  2:1257455/148‑1 (MQ=255)
           gAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTaa                                                                                                                                         <  2:244169/148‑1 (MQ=255)
           gAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTaa                                                                                                                                         <  2:591471/148‑1 (MQ=255)
           gAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTaa                                                                                                                                         <  2:2999281/148‑1 (MQ=255)
           gAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTaa                                                                                                                                         <  1:1164099/148‑1 (MQ=255)
            aaTTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTaaa                                                                                                                                        >  1:382957/1‑148 (MQ=255)
                    ccGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCa                                                                                                                                <  2:222568/148‑1 (MQ=255)
                     cGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCAt                                                                                                                               <  2:1364325/148‑1 (MQ=255)
                       cATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTa                                                                                                                             >  2:2725781/1‑148 (MQ=255)
                          cctccGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTaaaa                                                                                                                          >  1:1266761/1‑148 (MQ=255)
                             ccGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTaaaaaaa                                                                                                                       >  2:409154/1‑148 (MQ=255)
                             ccGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTaaaaaaa                                                                                                                       <  1:1607784/148‑1 (MQ=255)
                               gCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACg                                                                                                                     >  2:1834753/1‑148 (MQ=255)
                                 tAAAACATTTAATTAAAAGGGAGCATCAGGCTAATAAATTAAAAATATCTATCTTATTTATTAAATAAAAATTACCTATATTTAACATTATAATTAAAATTATTTTATTAATGAAAATATATTTAAAGCGGGGCATTAAAAAAACGcc                                                                                                                   <  2:1160823/148‑1 (MQ=255)
                                 tAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGcc                                                                                                                   >  1:3360395/1‑148 (MQ=255)
                                  aaaaCAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGccc                                                                                                                  >  2:3586462/1‑148 (MQ=255)
                                   aaaCAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGcccc                                                                                                                 >  1:2954413/1‑148 (MQ=255)
                                    aaCAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCg                                                                                                                >  2:3746044/1‑148 (MQ=255)
                                    aaCAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCg                                                                                                                >  1:3280204/1‑148 (MQ=255)
                                       atttaattaaAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTTTTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTaa                                                                                                             <  2:2051393/146‑1 (MQ=255)
                                       aGTTAATTAAAAGGGAGCATCAGGCTAATAAAGTAACAATATCGATCTTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTaa                                                                                                             <  1:2490632/148‑1 (MQ=255)
                                            attaaAAGGGAGCATCAGGCTAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATaa                                                                                                        <  2:2942055/148‑1 (MQ=255)
                                            attaaAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATaa                                                                                                        >  2:3229295/1‑148 (MQ=255)
                                              taaAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACt                                                                                                      >  2:3422606/1‑148 (MQ=255)
                                                   gggAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGAc                                                                                                 >  1:1415380/1‑148 (MQ=255)
                                                    ggAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACt                                                                                                >  2:84280/1‑148 (MQ=255)
                                                         aTCAGGCTAATAAAGTAACAATATCGATCTTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCa                                                                                           <  2:2612925/148‑1 (MQ=255)
                                                           cAGGCTAAAAAATTAAAAATATCTATATTATTTATAAAATAAAAATTACCTATATTTAACCTTATAATTAAAATTTTTTTATTAATGAAAATATATTTAAAGGGGGGAATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCAtt                                                                                         <  1:2626397/148‑1 (MQ=255)
                                                            tggataataatTTAAAAATATCTATCGTATTTATAAAATAAAAATTACCTATTTTTAACATTATAATTAATTTTTTTTTATTATTGAAAATATATTTAATGGGGGGAATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTa                                                                                        <  1:1763624/143‑1 (MQ=255)
                                                            aggataaTAAAGAAACAATATCGATCTTATTTATTAAATACAAATTACCTATATTTAACATTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGAATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTa                                                                                        <  1:591805/143‑1 (MQ=255)
                                                             ggCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTaa                                                                                       >  2:2218419/1‑148 (MQ=255)
                                                                  aTAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTa                                                                                  >  1:954644/1‑148 (MQ=255)
                                                                   tAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTAc                                                                                 >  1:1371088/1‑148 (MQ=255)
                                                                      aGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACAtt                                                                              >  1:1335483/1‑148 (MQ=255)
                                                                               atcgatcgTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCt                                                                     >  2:1566506/1‑148 (MQ=255)
                                                                                tctatcgTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTa                                                                    <  1:3122490/145‑1 (MQ=255)
                                                                                tcgatcgTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTa                                                                    >  1:63907/1‑148 (MQ=255)
                                                                                tcgatcgTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTa                                                                    >  2:700725/1‑148 (MQ=255)
                                                                                 ctatctTATTTATTAAATAAAAATTACCGATATTTAACATTATAATTACAATTATTTTATTAATGAAAATATATGTAAAGCGGGGAATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTAt                                                                   <  1:1964413/146‑1 (MQ=255)
                                                                                 cgatcgTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTAt                                                                   <  1:1912671/148‑1 (MQ=255)
                                                                                 cgatcgTATTTATTAAATAAAAATTACCGATATTTAACCTTATAATTAAAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTAt                                                                   <  1:2713342/148‑1 (MQ=255)
                                                                                   atcgTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTAttt                                                                 >  1:3178050/1‑148 (MQ=255)
                                                                                    tcgTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTg                                                                >  1:2912890/1‑148 (MQ=255)
                                                                                    tcgTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTg                                                                >  2:2751763/1‑148 (MQ=255)
                                                                                    tcgTATTTATTAAATAAAAATTACCGATTTTTAACCTTATAATTACAATTATTTTATTAATGAAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTg                                                                <  1:2398029/148‑1 (MQ=255)
                                                                                        attttttAAATACAATTTCCGGATTTTTAACATTATAATTACACTTATTTTATTAATGAAAATATATTTAAAGCGGGGCTTTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGattt                                                            <  1:2810221/148‑1 (MQ=255)
                                                                                        atttattAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGattt                                                            >  1:2368142/1‑148 (MQ=255)
                                                                                        atttattAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGattt                                                            >  1:445960/1‑148 (MQ=255)
                                                                                         tttattAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGatttt                                                           >  1:2412333/1‑148 (MQ=255)
                                                                                         tttattAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGatttt                                                           <  2:72949/148‑1 (MQ=255)
                                                                                          ttattaAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGatttta                                                          >  2:969144/1‑148 (MQ=255)
                                                                                          ttattaAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATAGCGTAGGCTATTTGatttta                                                          >  2:968960/1‑148 (MQ=255)
                                                                                           tattaAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGattttat                                                         <  2:3319971/148‑1 (MQ=255)
                                                                                           tattaAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGattttat                                                         <  2:2426937/148‑1 (MQ=255)
                                                                                           tattaAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGattttat                                                         >  1:2011796/1‑148 (MQ=255)
                                                                                            attaAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGattttatt                                                        <  2:792102/148‑1 (MQ=255)
                                                                                              taAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGattttatttt                                                      >  2:1630588/1‑148 (MQ=255)
                                                                                                  tACAAATTACCGATATTTAACCTTATAATTAAAATTATTTTATTAATGCAAATATATGTAAAGGGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGccc                                                  <  1:2074054/148‑1 (MQ=255)
                                                                                                   aCAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCa                                                 >  1:3649327/1‑148 (MQ=255)
                                                                                                   aCAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCa                                                 >  1:2344739/1‑148 (MQ=255)
                                                                                                    cAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAg                                                >  1:772344/1‑148 (MQ=255)
                                                                                                    cAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAg                                                >  1:3749726/1‑148 (MQ=255)
                                                                                                      aaTTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGaa                                              <  2:1778421/148‑1 (MQ=255)
                                                                                                      aaTTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGaa                                              >  2:2417831/1‑148 (MQ=255)
                                                                                                        ttACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAAtg                                            <  2:2957987/148‑1 (MQ=255)
                                                                                                         tACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAAtgc                                           >  2:3088409/1‑148 (MQ=255)
                                                                                                         tACCGATATTTAACCTTATAATTACAATTATTTTATTAATGAAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAAtgc                                           <  2:3443546/148‑1 (MQ=255)
                                                                                                           ccGTTATTTAACTTTATAATTAAAATTTTTTTATTAATGAAAATATATGTAAAGGGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAAtgctg                                         <  1:2589246/148‑1 (MQ=255)
                                                                                                             gATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGAATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATgctgct                                       <  1:2756716/148‑1 (MQ=255)
                                                                                                             gATATTTAACCTTATAATTACAATTATTTTATTAATGAAAATATATGTAAAGCGGGGCATTAAAAACACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATgctgct                                       <  1:504794/148‑1 (MQ=255)
                                                                                                              atatTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCtt                                      >  1:25257/1‑148 (MQ=255)
                                                                                                               tttttAACATTATAATTACATTTATTTTATTAATGAAATTATTTGTAAAGCGGGGAATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCttt                                     <  1:1014364/146‑1 (MQ=255)
                                                                                                               tatTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAATGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCttt                                     <  1:1014454/148‑1 (MQ=255)
                                                                                                                atTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTg                                    <  2:3268445/148‑1 (MQ=255)
                                                                                                                 tttAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTgg                                   >  1:932291/1‑148 (MQ=255)
                                                                                                                     aCCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGgcgcg                               <  2:1415380/148‑1 (MQ=255)
                                                                                                                        ttATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTg                            >  2:3513634/1‑148 (MQ=255)
                                                                                                                        ttATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTg                            >  2:2087272/1‑148 (MQ=255)
                                                                                                                                 cAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTc                   >  2:1191213/1‑148 (MQ=255)
                                                                                                                                 cAATTATTTTATTAATGAAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTc                   <  1:718160/148‑1 (MQ=255)
                                                                                                                                    ttattttattAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTa                >  1:3474579/1‑148 (MQ=255)
                                                                                                                                    ttattttattAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGAAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTa                >  1:382432/1‑148 (MQ=255)
                                                                                                                                     tattttattAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAg               >  2:1024717/1‑148 (MQ=255)
                                                                                                                                        tttattAATGCAAATAAATGTAAATCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGAAAAATCATTAAGACTACATTGCGTAGGCAATTTGATTTTATTTTGCCCAGAATGCTGCAGTGGCGCGCTGAAGCTTTTAGAAGGcc            >  2:1870172/1‑148 (MQ=255)
                                                                                                                                          tattaATGAAAATATATTTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCtt          <  1:1730772/148‑1 (MQ=255)
                                                                                                                                             taATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTcaa       <  1:2218419/148‑1 (MQ=255)
                                                                                                                                             taATGAAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTcaa       <  2:3533646/148‑1 (MQ=255)
                                                                                                                                             taATGAAAATATATGTAAAGCGGGGAATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTcaa       <  1:3005416/148‑1 (MQ=255)
                                                                                                                                                  cAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACg  >  1:235343/1‑148 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
ACAAATGAGTTGAATTTTTTCCGCATCCTCCGCTAAAACAGTTAATTAAAAGGGAGCATCAGGCGAATAAAGTAACAATATCGATCGTATTTATTAAATACAAATTACCGATATTTAACCTTATAATTACAATTATTTTATTAATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACG  >  CP009273/950093‑950386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: