| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 96,977 | C→A | 11.7% | H283N (CAT→AAT) | murG → | N‑acetylglucosaminyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 96,977 | 0 | C | A | 11.7% | 498.1 / 21.4 | 177 | H283N (CAT→AAT) | murG | N‑acetylglucosaminyl transferase |
| Reads supporting (aligned to +/- strand): ref base C (72/80); new base A (15/10); total (87/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 180 total aligned reads displayed.
GGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAAC > CP009273/96830‑97124 | gggCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAc < 2:3600433/148‑1 (MQ=255) ccGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAg < 2:2954820/148‑1 (MQ=255) cGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGTGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGa < 2:50627/148‑1 (MQ=255) cagcaTAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACAAAAATAcc > 2:3023044/1‑148 (MQ=255) gcaTAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGc > 2:1926433/1‑148 (MQ=255) aaaGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑TCCGTTTAAACATAAATAACGCCatc > 2:2108070/1‑146 (MQ=255) aaaGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTAAACAAAAATAACCCCAGc > 1:3442859/1‑148 (MQ=255) aaGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTTCCGCACCGGTGCGTTAACGGTGAGTGTAAACGCCCCGGCAGGACTACCCGCGTGGTTTGT‑GCCGGTTCAACAAAAATACCCCCCGCa > 1:1240264/1‑148 (MQ=255) aaGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCa > 2:675895/1‑148 (MQ=255) gTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAAt < 1:1122134/148‑1 (MQ=255) gTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAAt < 2:3363233/148‑1 (MQ=255) gTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAAt < 1:3483960/148‑1 (MQ=255) gTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAGTAAAGACCGCCAGCAAt < 2:3799522/148‑1 (MQ=255) gTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAATAAAGACCGCCAGCAAt < 2:787216/148‑1 (MQ=255) gTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAATAAAGACCGCCAGCAAt < 2:1910978/148‑1 (MQ=255) tGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATa > 2:854725/1‑148 (MQ=255) tGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGGTTAAAAATAAAGAACCCCACCAATa > 1:2860255/1‑148 (MQ=255) gAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGa < 2:2834175/148‑1 (MQ=255) aaTTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCCGGACTACCGGCGGTGGTTTT‑GCCGTTTGAACAAAAAAACCGCCCGCAAAACAggta > 1:2085713/1‑146 (MQ=255) aaTTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTGAACATAAAGAACGCCAGCAATACTggca > 2:3557486/1‑146 (MQ=255) aaTTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTGAAAATAAAGACCGCCAGCAATAATGGaa > 2:1646693/1‑148 (MQ=255) aaTTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGaa < 1:2607430/148‑1 (MQ=255) tttATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATg < 1:684079/148‑1 (MQ=255) ttATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGGGCGTTAACGGGGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTAAACATAAAGACCGCCAGCAAAACTGGAATgc > 2:3452886/1‑148 (MQ=255) tATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATgcg < 1:3578300/148‑1 (MQ=255) tATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGGTTCAACATAAAGACCGCCAGCAATACTGGAATtcg > 2:2779606/1‑148 (MQ=255) gaTTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATgcg < 1:3451248/147‑1 (MQ=255) tgatgaTATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTa < 2:1158910/148‑1 (MQ=255) tgatATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGTGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGGTTGAAAATAAATAACGCCAGCAAAACAGGAAAGCGCTAccc > 1:1888746/1‑147 (MQ=255) gcggcggcgTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGaaa < 1:3816402/148‑1 (MQ=255) ggcggcgTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGaaaaa < 1:3361055/148‑1 (MQ=255) gcggcgTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAg < 1:1443425/148‑1 (MQ=255) tGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGGAAAAGCGGGCGCa > 2:538898/1‑148 (MQ=255) tGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGTCCCCCAGCAATACTGGAAAGCGCTACCGCTGGAAAAAGCGGGCGCAGCCa > 2:1262011/1‑148 (MQ=255) tGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAAAACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCa > 2:3166874/1‑148 (MQ=255) ggCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTTTGGCGGTTGAAAAAAAAAAACCCCCCCCATAAATGGAAT‑CGCTAACCCGGGCAAAAGCGGGGGCCGCCaaa > 1:508425/1‑148 (MQ=255) ggCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTTT‑TCCGTTTGAACATAAATACCGCCCGCCATAAATGAAATAGCTACCGCGGGACAAAACGGGCGGAggccaa > 2:1367633/1‑143 (MQ=255) ggATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAAtt < 2:654736/148‑1 (MQ=255) gATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTa < 2:3126769/148‑1 (MQ=255) gATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTa < 2:3126700/148‑1 (MQ=255) gATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTa < 1:3146671/148‑1 (MQ=255) gATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTAAACATAAAGACCGCCAGCAATCCTGGAATGCGATACCGCTGGAAAAAGCGGGCGCAGCCAAAATTa < 1:3515828/148‑1 (MQ=255) aTGTCGTCGTTTGCCGCTCCGGTGCGTTAAAGGTGAGTGAAAACGCCGCGGCAGGACTACCGGCGTTGTTTTT‑GCCCGTTGAACAAAAATAACCCCCCCAATACTGGAATGAGCAACCCCGGGAAAAAACGGGCGCACCCAAAATTAt > 1:3406962/1‑148 (MQ=255) tcgtTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTTT‑GCCCTTTAAAAAAAAACAACCCCAGCAAAAAATGAAATCGCAACCCCTGGAAAAAACGGGCGCCCCCAAAAatatacacca > 1:3112844/1‑142 (MQ=255) tcgtTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACAAAAATACCGCCAGCAATACTTGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGagca > 2:2434235/1‑148 (MQ=255) tcgtTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAAAAAATACCCCCAGCAATACTTGAATTCGCTACCGCAGGAAAAAGCGGGCGCAGCCCAAATTATCGagca > 1:3112695/1‑148 (MQ=255) cgtTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGagcag > 2:2357903/1‑148 (MQ=255) tGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCcac < 1:978900/148‑1 (MQ=255) tGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCcac < 2:2728277/148‑1 (MQ=255) cTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCtt < 2:1550915/148‑1 (MQ=255) tCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTa < 1:876867/148‑1 (MQ=255) tCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTa < 1:3290737/148‑1 (MQ=255) tCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTa < 2:2009597/148‑1 (MQ=255) ccGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAg < 1:453532/148‑1 (MQ=255) cGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGa < 1:398304/148‑1 (MQ=255) ttAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTTT‑GCCGTTTAAAAATAAAGAACCCCATCAATAATGGAATTCGCTACCGCTGGTAAAATCGGGCGCAGCCAAAAATATAGAGCAGCCACAGCTTAGCGTTGATg > 1:3359459/1‑148 (MQ=255) ttAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑TCCGTTTCAACATAAATACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATg > 1:305203/1‑148 (MQ=255) ttAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATg > 1:2849533/1‑148 (MQ=255) ttAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACAGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATg > 1:305122/1‑148 (MQ=255) tAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTTT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTAACGCAGGAAAAAGCGGGCTCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGAAGc > 2:1195708/1‑148 (MQ=255) tAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTTT‑GCCGTTTACACAAAAAGACCGCCACCCAAACAGGAATTCGCAAACGCAGGTAAAAGCCGGGGCCGCCCAAATTATAGAGCAGCCACACCATAGCGTTGATGc > 1:2917425/1‑148 (MQ=255) tAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGc > 2:529694/1‑148 (MQ=255) tAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGc > 2:302071/1‑148 (MQ=255) tAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCGGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGc > 2:2276076/1‑148 (MQ=255) tAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCCTTTCAAAATAAAGACCGCCAGCAAAACAGGAATGCGCTACCGCGGGAAAAAGCGGGCGCAGCCCAAATTATCGAGCAGCCACACCTTAGCGGGGATGc > 1:1153984/1‑148 (MQ=255) aCGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAAAATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTg < 1:3489571/148‑1 (MQ=255) gtgaAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCaa < 1:1183459/148‑1 (MQ=255) gtcaaaTCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCaa < 1:1731844/145‑1 (MQ=255) gaAATCGCCGCGGCAGGACTACCGGCGTTGGTTGT‑GCCGTTTCCACATAAAGACCGCCCGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCCGCCCCAGCTTAGCGTGGATGCTGTCGCCcaca > 2:1014580/1‑148 (MQ=255) aaTCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACAcc < 1:829992/148‑1 (MQ=255) aTCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACAccc < 1:2048392/148‑1 (MQ=255) gCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCGGGAAAAATCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGggt > 2:1701813/1‑148 (MQ=255) aGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGggtgg < 2:2259861/148‑1 (MQ=255) aGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGggtgg < 1:584001/148‑1 (MQ=255) ggACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGggtggt < 2:2465360/148‑1 (MQ=255) ggACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGggtggt < 2:2339726/148‑1 (MQ=255) tACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTcgcg < 2:631264/148‑1 (MQ=255) cGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAAc > 2:237168/1‑148 (MQ=255) cGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAAc < 2:2859836/148‑1 (MQ=255) cGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAAc < 2:2860255/148‑1 (MQ=255) cGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAAc < 2:1662470/148‑1 (MQ=255) ttgtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCt > 1:1385339/1‑148 (MQ=255) tgtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCtt < 2:2349064/148‑1 (MQ=255) tgtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCtt > 1:1741596/1‑148 (MQ=255) tgtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCtt > 1:110750/1‑148 (MQ=255) tgtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCtt > 1:3453423/1‑148 (MQ=255) gtttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCtta > 1:2560248/1‑148 (MQ=255) tttgt‑GCCGTTTCAACATACAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCttat < 2:1267605/148‑1 (MQ=255) ttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCttatt > 1:1308144/1‑148 (MQ=255) ttgt‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCttatt > 2:1123358/1‑148 (MQ=255) ttgt‑GCCGTTTCAAAATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCttatt > 2:3401321/1‑148 (MQ=255) gCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAAcc < 2:3727368/148‑1 (MQ=255) gCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAAcc < 2:3725950/148‑1 (MQ=255) gCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAAcc > 2:2283768/1‑148 (MQ=255) tttCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATgg > 2:3468083/1‑148 (MQ=255) aaCATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGa < 2:2508676/148‑1 (MQ=255) aCATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGaa < 1:2373802/148‑1 (MQ=255) aCATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGaa > 1:1641267/1‑148 (MQ=255) aCATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGaa > 1:636427/1‑148 (MQ=255) cATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAAc > 2:1793209/1‑148 (MQ=255) | GGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGT‑GCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAAC > CP009273/96830‑97124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |