Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,701,282 A→C 12.6% Q36P (CAG→CCG)  rsxC → SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,701,2820AC12.6% 351.6 / 9.8 185Q36P (CAG→CCG) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (89/66);  new base C (24/5);  total (113/72)
Fisher's exact test for biased strand distribution p-value = 1.19e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 186 total aligned reads displayed.

GAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCAC  >  CP009273/1701138‑1701429
                                                                                                                                                |                                                                                                                                                   
gAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAAACCAGTCCAACGGTACACCCCTGCGGCAgtg                                                                                                                                                  >  2:2030532/1‑146 (MQ=255)
   cacCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTAcc                                                                                                                                               >  2:2641332/1‑148 (MQ=255)
    acCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTAccc                                                                                                                                              <  2:1354540/148‑1 (MQ=255)
    acCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTAccc                                                                                                                                              <  1:3234764/148‑1 (MQ=255)
     ccATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTAcccc                                                                                                                                             >  2:733540/1‑148 (MQ=255)
     ccATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTAcccc                                                                                                                                             >  2:2774986/1‑148 (MQ=255)
      cATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCt                                                                                                                                            <  1:3819099/148‑1 (MQ=255)
         tCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGgc                                                                                                                                         >  2:3421622/1‑148 (MQ=255)
            cGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCa                                                                                                                                      >  2:617930/1‑148 (MQ=255)
            cGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCa                                                                                                                                      >  2:3273890/1‑148 (MQ=255)
            cGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCa                                                                                                                                      >  2:1946615/1‑148 (MQ=255)
             gTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGgcgccg                                                                                                                                     >  1:2449581/1‑146 (MQ=255)
               gcttATCATTCCCGTGGAACACCATGCTTATGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCACCGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCg                                                                                                                                   <  1:589271/145‑1 (MQ=255)
                  tATCATTCCGGTGTAACACCTTTATTATTTTTTTCTCTGAATTCATAAAAAATAAAATCTGGTATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCGGCGCCAGGTACCCCTGGCGCAGCGttt                                                                                                                                <  1:1128483/148‑1 (MQ=255)
                     cATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGt                                                                                                                             >  2:96286/1‑148 (MQ=255)
                      aTTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGtt                                                                                                                            <  2:3334929/148‑1 (MQ=255)
                        tCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTAt                                                                                                                          >  1:744984/1‑148 (MQ=255)
                             tgcaaCACCATGTTTATTTTATTCTCTCAATTCAAAAAAAATAAAATCTGGGTTTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCAc                                                                                                                     <  1:1034939/145‑1 (MQ=255)
                             tGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCAc                                                                                                                     >  1:3121399/1‑148 (MQ=255)
                               gAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCCCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGGTCTTCCACTg                                                                                                                   >  2:3242127/1‑148 (MQ=255)
                               gAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGGGCCAGGTAACCCAGGCGCACCCttttttttttaaacag                                                                                                                   >  1:1843592/1‑142 (MQ=255)
                               gAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTg                                                                                                                   >  1:842110/1‑148 (MQ=255)
                               gAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGGTTGTTATTCCACTg                                                                                                                   >  2:3420975/1‑148 (MQ=255)
                                aaCACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGa                                                                                                                  >  2:3729149/1‑148 (MQ=255)
                                  cacCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACGGaaa                                                                                                                >  2:3473621/1‑148 (MQ=255)
                                  cacCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTTTTGCACTGaaa                                                                                                                >  1:3296652/1‑148 (MQ=255)
                                   acaaTGCTTAATTTTTTCTCTGAATTCATAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAAc                                                                                                               <  1:3568673/145‑1 (MQ=255)
                                     cATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTGTTGTTATTCCACTGAAACAg                                                                                                             >  2:1303352/1‑148 (MQ=255)
                                      aTGCTTAAGTTTTTCTCTGAATTCAAAAAAAAAAAAATCTGGGATTACAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGc                                                                                                            <  1:1721880/148‑1 (MQ=255)
                                      aTGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCTTCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTCTTCCACTGAACCAGc                                                                                                            >  2:2167190/1‑148 (MQ=255)
                                      aTGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCTGGCGCCGCGTTTTGTTTTTACACTGAAACAGc                                                                                                            >  1:3395913/1‑148 (MQ=255)
                                         cTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTCCCCCAGGCGCCGCGGTTTGTTTTTACACTGAAACAGCata                                                                                                         >  1:1329640/1‑148 (MQ=255)
                                           tAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCAGGCGCAGCGGTTTGTTATTCCACTGAAACACCataat                                                                                                       >  1:1993766/1‑146 (MQ=255)
                                             aGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGACCAACGGTACACCCCTGCCCCACGTAACCCGCGCGCAGCGTGTTGTTATTACACTGAAACACCacatatg                                                                                                     >  1:1798918/1‑145 (MQ=255)
                                              gTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGgc                                                                                                    >  1:3009485/1‑148 (MQ=255)
                                               ttATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGgcg                                                                                                   <  2:892820/148‑1 (MQ=255)
                                                 aTTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCt                                                                                                 <  2:1883307/148‑1 (MQ=255)
                                                   tctcTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTGTTGTTATTCCACTGAAACAGCATATTGCCGCTGa                                                                                               >  2:2325391/1‑148 (MQ=255)
                                                    ctctTCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGaa                                                                                              <  2:497323/148‑1 (MQ=255)
                                                      ctGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAgg                                                                                            >  1:162234/1‑148 (MQ=255)
                                                      ctGCATACATAAAAAATAAACGCGGGGATTTCAACGGCGGCATCCATCCACCGGATTTGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGTTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAgg                                                                                            <  1:1631267/148‑1 (MQ=255)
                                                      ctGAATACAAAAAAAATAAAATCTGGCATTACACCGGCGGCAACCATCCACCGGAGATGAAAACCCAGTCCACCGGTACACCCCTGCGCCCGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAgg                                                                                            <  1:1629051/148‑1 (MQ=255)
                                                        caaTTCAGAAAAAATAAAATCGGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTg                                                                                          <  1:1151820/146‑1 (MQ=255)
                                                          aTTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAg                                                                                        <  1:3375139/148‑1 (MQ=255)
                                                           tacAGAAAAAATAAACTCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGt                                                                                       <  1:2149344/146‑1 (MQ=255)
                                                            tCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGCAACAGCATATTGGCGCTGAAGGTGCGtt                                                                                      >  2:85741/1‑148 (MQ=255)
                                                            tCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTTGCGCTGAAGGTGAGtt                                                                                      >  1:2348374/1‑148 (MQ=255)
                                                             cAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTtg                                                                                     <  2:2811687/148‑1 (MQ=255)
                                                               gAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTtgtg                                                                                   >  2:1365204/1‑148 (MQ=255)
                                                                aaaaaaTAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCTGGCGCCGCGGTTTGTTATTCCACTGAAACAGCCTATTGGCGCTGAAGGTGAGTtgtgg                                                                                  >  1:2777259/1‑147 (MQ=255)
                                                                aaaaaaTAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGc                                                                                  >  2:2432105/1‑148 (MQ=255)
                                                                 aaaaaTAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGCAAACCCTGGCGCAGCGATTTGTTATTCAACAGTAAAAGGAAATTGGCGCTGACAGTGAGGtgtggg                                                                                 >  1:1528593/1‑146 (MQ=255)
                                                                  aaaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGt                                                                                >  1:3177938/1‑148 (MQ=255)
                                                                   aaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACCCCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGtt                                                                               <  2:2915885/148‑1 (MQ=255)
                                                                   aaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCCTATTTGCGCTGAAGGTGAGTTGTGCggt                                                                               >  1:632171/1‑146 (MQ=255)
                                                                   aaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGtt                                                                               <  2:1005376/148‑1 (MQ=255)
                                                                   aaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACGGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGtt                                                                               >  1:2704902/1‑148 (MQ=255)
                                                                    aataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGTTTTGTTATTGCACTGAAAAAGCATATTGGGGCGGAAGGTGAGTTGTGCGTTa                                                                              >  1:1849521/1‑148 (MQ=255)
                                                                      taaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCAGGCGCAGCGTATTGTTATTCCACTTAAACACCATATTGGCGCTGCAGGGGAGTTGTGCGTTGGc                                                                            >  2:1954012/1‑148 (MQ=255)
                                                                       aaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGGTAGCg                                                                           >  2:425286/1‑148 (MQ=255)
                                                                            cTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGc                                                                      >  2:1654345/1‑148 (MQ=255)
                                                                             tGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCg                                                                     <  2:3164404/148‑1 (MQ=255)
                                                                             tGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCCGCGGTTTGTTTTTCCACTGAAACAGCCGATTGGCGCTGAAGGTGGGTTGTGCGTTAGCGTCGGCg                                                                     >  1:1470292/1‑148 (MQ=255)
                                                                              gggATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCCGTACCCCGGGCGCAGCGTTTTGTTATTCCCCTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGGTAGCGTCGGCgc                                                                    >  1:1834814/1‑147 (MQ=255)
                                                                              gggATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCCTATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGa                                                                    >  1:2555114/1‑148 (MQ=255)
                                                                              gggATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCAGGCGCCGCGGTTTGTTATTGCACTGAAACAGCATAATGGGGCGGAAGGTGTGTTGTGCGTTAGGGTCGGCGa                                                                    >  1:1834855/1‑148 (MQ=255)
                                                                                gATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCGGGCGCCCCGGTTTGTTATTCCACTGAAACACCAGATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATa                                                                  >  1:3097943/1‑148 (MQ=255)
                                                                                 aTTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGGTGAAGGTGAGGTGTGCGTTAGCGTCGGCGATaa                                                                 >  2:2580313/1‑148 (MQ=255)
                                                                                 aTTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATaa                                                                 <  1:3622118/148‑1 (MQ=255)
                                                                                 aTTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATaa                                                                 <  2:842095/148‑1 (MQ=255)
                                                                                   ttCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCGGGCGCCGCGGTTTGTTTTTACACTGGAACAGCATATTGGCGCTGAAGGTGAGTTGTGGGGTTGCGTCGGCGCTAAAg                                                               >  1:2082225/1‑148 (MQ=255)
                                                                                   ttCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTGCACGGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGGTATCGTCGGCGATAAAg                                                               >  1:2288924/1‑148 (MQ=255)
                                                                                   ttCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCGGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAg                                                               >  1:1834288/1‑148 (MQ=255)
                                                                                       aCGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTTCCCCGGGCGCCGCGTTTTGTTTTTCCCCGGAAACACCCTCTTGGCGCTGTAGGTGGGTTGTGGGTTTGCGTCGGCGTTAAattatt                                                           >  1:2926163/1‑148 (MQ=255)
                                                                                        cggcggCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCTGGCGCCGCGTTTTGTTTTTCCACTGAAACACCAGATTTGGGCTGAAGGTGAGGTGTGCGTTTTCGTCGGCGCTAAAGTAttt                                                          >  1:3225708/1‑147 (MQ=255)
                                                                                        cggcggCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTg                                                          >  2:3695681/1‑148 (MQ=255)
                                                                                        cggcggCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTg                                                          <  1:1365204/148‑1 (MQ=255)
                                                                                              catccatcCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTAATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGc                                                    <  1:1749736/148‑1 (MQ=255)
                                                                                               atccatccACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGcc                                                   >  2:2098178/1‑148 (MQ=255)
                                                                                                tccatccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCGGGCGCACCGGGGTGTTTTTAAACGGCTACAGACTATGGGGGCGGAAGGTGAGTTGTGGGTTAGGGTCGGCGCTTAATGATTTCGCgggcc                                                  >  1:320053/1‑145 (MQ=255)
                                                                                                 ccatccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAg                                                 >  2:1607062/1‑148 (MQ=255)
                                                                                                    tccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCg                                              >  2:1253041/1‑148 (MQ=255)
                                                                                                     ccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGc                                             <  2:1024821/148‑1 (MQ=255)
                                                                                                        ccGGAGATGAAAACCCAGTCCACCGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTa                                          <  2:2647358/148‑1 (MQ=255)
                                                                                                        ccGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTa                                          <  2:812572/148‑1 (MQ=255)
                                                                                                               tGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTgg                                   <  1:1537481/148‑1 (MQ=255)
                                                                                                                gAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGt                                  <  1:733540/148‑1 (MQ=255)
                                                                                                                   aaCCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCTGGCGCAGCGTTTTGTTATTCCACGGAAACAGCATATTGGCGCTGTAGGTGAGTTGTGCGTTAGCGTGGGCGATAAAGTATTGCGCGGCCAGCCGCGTACCCGTGGTcgc                               >  1:2109739/1‑148 (MQ=255)
                                                                                                                    aCCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTcgcg                              >  2:125150/1‑148 (MQ=255)
                                                                                                                          tCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGTAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCCGCCGCGTACCCGTGGTCGCGGCaaaa                        >  2:1111222/1‑148 (MQ=255)
                                                                                                                          tCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGCAGGTGAGGTGTGCGTTAGCGGCGGCGATAAAGTATTGCGCGGCCCGCCGCTTACCCGGGGTCGCGGCcaaa                        >  2:1428054/1‑148 (MQ=255)
                                                                                                                          tCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCaaaa                        >  2:3062925/1‑148 (MQ=255)
                                                                                                                               cGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAtgctg                   <  2:1213690/148‑1 (MQ=255)
                                                                                                                               cGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTACACTGAAACAGCAGATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAtgctg                   >  1:2788285/1‑148 (MQ=255)
                                                                                                                                   acacCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTg               <  2:33031/148‑1 (MQ=255)
                                                                                                                                    cacCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGt              >  2:3124545/1‑148 (MQ=255)
                                                                                                                                     acCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGtt             <  1:2992427/148‑1 (MQ=255)
                                                                                                                                     acCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTTTTCCACTGAAACAGCATAATGGCGCGGACGGGGCGTTGTGCGTTAGCGTCGGCGATCAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTGGCGGCCAAATGGTGccgggt             >  2:683685/1‑144 (MQ=255)
                                                                                                                                        ccTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAATATGCTGCCTGTTCAc          >  2:2681990/1‑148 (MQ=255)
                                                                                                                                          tGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCGGTTCAcgc        >  2:3385225/1‑148 (MQ=255)
                                                                                                                                                |                                                                                                                                                   
GAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCAC  >  CP009273/1701138‑1701429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑