Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,004,533 G→T 100% T151T (ACG→ACT)  yedL → putative acyl transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,004,5330GT100.0% 503.0 / ‑6.7 202T151T (ACG→ACT) yedLputative acyl transferase
Reads supporting (aligned to +/- strand):  ref base G (4/2);  major base T (86/103);  minor base A (7/0);  total (97/105)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 203 total aligned reads displayed.

GATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTG  >  CP009273/2004388‑2004677
                                                                                                                                                 |                                                                                                                                                 
 aTGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTa                                                                                                                                                <  1:1955171/148‑1 (MQ=255)
   gCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTCATTTACTCTATg                                                                                                                                              >  1:2534234/1‑148 (MQ=255)
            gCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAaataa                                                                                                                                    <  1:111615/148‑1 (MQ=255)
            gCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAaataa                                                                                                                                    <  2:42948/148‑1 (MQ=255)
            gCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAaataa                                                                                                                                    <  1:1590005/148‑1 (MQ=255)
               tGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGa                                                                                                                                 <  2:2473056/148‑1 (MQ=255)
               tGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGa                                                                                                                                 <  2:2473395/148‑1 (MQ=255)
                gAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGaa                                                                                                                                <  2:927491/148‑1 (MQ=255)
                      aGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCa                                                                                                                          <  1:259578/148‑1 (MQ=255)
                      aGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCa                                                                                                                          <  1:186407/148‑1 (MQ=255)
                       gAAACGGGTACACAGGCTGGATGTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCAt                                                                                                                         <  2:3300834/148‑1 (MQ=255)
                        aaaCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATg                                                                                                                        >  2:1239167/1‑148 (MQ=255)
                        aaaCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATg                                                                                                                        >  2:3006717/1‑148 (MQ=255)
                          aCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTGACTCTATGCG‑AAAATAATGAATTTCCATGAg                                                                                                                      >  1:1246955/1‑148 (MQ=255)
                           cGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGc                                                                                                                     <  2:2409696/148‑1 (MQ=255)
                            gggTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGcc                                                                                                                    <  2:3096896/148‑1 (MQ=255)
                            gggTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGcc                                                                                                                    <  2:1929564/148‑1 (MQ=255)
                             ggTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTCATTGACTCTATTCG‑AAAATAATGAATTTCCATGAGCCa                                                                                                                   >  1:2829661/1‑148 (MQ=255)
                              gTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTTACTAAATTCG‑AAAATAATTAATTTGCATGATcccg                                                                                                                  >  1:1881281/1‑146 (MQ=255)
                              gTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAg                                                                                                                  <  1:3436212/148‑1 (MQ=255)
                               tACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGa                                                                                                                 <  2:560295/148‑1 (MQ=255)
                               tACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTTTAAATTACTCTATTCG‑AAAATAATGAATTGCCATGAGCCaca                                                                                                                 >  1:2789718/1‑146 (MQ=255)
                               tACACAGGCTGGATTTACGCCCTCCCATCNACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATAATNCACTACAACCACACAGACGATTTTTATGATTGTCACCATTCC‑CAAATAATGAAAAGCCAAGAGcccta                                                                                                                 >  2:1815917/1‑145 (MQ=255)
                                        tGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGcaca                                                                                                        <  1:3176749/148‑1 (MQ=255)
                                         ggATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTTCTCTATTCG‑AAAATAATTAATTTACATGAGCCAGACGCAGCACAt                                                                                                       >  1:3149950/1‑148 (MQ=255)
                                         ggATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTTCTATATTCG‑AAAATAAATAATTTGCATGAGCCAGACGCAGcacaa                                                                                                       >  1:3151010/1‑147 (MQ=255)
                                           aTTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTCTATGCG‑AAAAAAAAGAATTTCCATGAGCCAGACGCCCCACAtta                                                                                                     >  1:2548527/1‑147 (MQ=255)
                                            tttACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTTCTATATGCG‑AAAATAATGAATTTCCCAGAGCCAGACGCAGCACAATCt                                                                                                    >  2:326181/1‑148 (MQ=255)
                                             ttACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAAATGTGTCTATTCG‑AAAATAAATAATTTGCAAGAGCCAGACGCAGCCCAtaaat                                                                                                   >  1:3239713/1‑144 (MQ=255)
                                             ttACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGAATCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCtt                                                                                                   >  2:2693176/1‑148 (MQ=255)
                                                cGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGAATCTATGCG‑AAAAAAATGAATTGCCCTGGTCCAGACGCAGCCCATTATTGCa                                                                                                >  1:2859217/1‑148 (MQ=255)
                                                 ggCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCAt                                                                                               <  2:3471944/148‑1 (MQ=255)
                                                     tGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACAATCTTGCAATCGa                                                                                           >  2:3716636/1‑148 (MQ=255)
                                                     tGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTCTATGCG‑AAAAAAATGAATTGCCAAGAGCCAGACGCAGCACAATATTGCATTCGa                                                                                           >  2:3711290/1‑148 (MQ=255)
                                                       ccATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACg                                                                                         <  2:594983/148‑1 (MQ=255)
                                                        cATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCGATGCG‑AAAAAAATGAATTTGCATGTTCCAGTCGCCGCACATTCATGCAATAGACGt                                                                                        >  2:2245720/1‑148 (MQ=255)
                                                         aTCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATGCG‑AAAATAATTAATTGCCAAGAGCCACACGCAGCACATTCTTGCAATAGACGtg                                                                                       >  2:896745/1‑148 (MQ=255)
                                                         aTCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTTCCATGAGCCAGACGCAGCACATTCTTGCCTTCGACGtg                                                                                       >  2:1898863/1‑148 (MQ=255)
                                                         aTCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGtg                                                                                       <  2:480487/148‑1 (MQ=255)
                                                         aTCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCAATGACTCTATGCG‑AAAATAATGAATTGCCATGATCCAGACGCAGCACATTCTTTCATTAGACGtg                                                                                       >  2:1898349/1‑148 (MQ=255)
                                                             aCTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATGACTCTATGCG‑AAAATAATGAAATTGCATGATCCACACGCAGCACAATCTTGCAATCGACGtgctgc                                                                                   >  2:1056339/1‑148 (MQ=255)
                                                                ttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATGCG‑CAAAAAATTAAATGGCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGcc                                                                                >  2:1634282/1‑148 (MQ=255)
                                                                ttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATTCG‑AAAATAATGAAATTCCATGAGCCAGACGCAGCACAATATTGCATTAGACGTGCTGCGcc                                                                                >  2:1474400/1‑148 (MQ=255)
                                                                ttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATGGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGcc                                                                                <  2:2937745/148‑1 (MQ=255)
                                                                ttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTTCTCTATTCG‑AAAATAATTAAATTCCAAGAGCCAGACGCCCCACAATCTTGCATTAGACCTGGTGCGcc                                                                                >  1:2472962/1‑148 (MQ=255)
                                                                 tATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCt                                                                               <  2:1478575/148‑1 (MQ=255)
                                                                  aTTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtt                                                                              <  1:3289344/148‑1 (MQ=255)
                                                                   tttGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGAATCTATGCG‑AAAATAATGAATTTCCATGAGCCAGACGCAGCACATTCTTTCATTCGACGTGCTGCGCCttt                                                                             >  2:627528/1‑148 (MQ=255)
                                                                     tGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtttat                                                                           <  1:2991750/148‑1 (MQ=255)
                                                                     tGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtttat                                                                           <  1:1725476/148‑1 (MQ=255)
                                                                       aaGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATTATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtttattt                                                                         <  2:2014606/148‑1 (MQ=255)
                                                                       aaGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATTTATATATGCGAAAAAAAATAATTTGCCA‑GAGCCCCACGCACCCCAAAATTGCATTCGAAGTTCTGCGCCggtattt                                                                         >  2:981021/1‑148 (MQ=255)
                                                                       aaGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTTTGAATTTCTCTATTCG‑CAAAAAATTAATTGGCAAGAGCCCCACGCAGCACAATATTTCATTAGACGTGCTGCGGCgttattt                                                                         >  1:202380/1‑148 (MQ=255)
                                                                        aGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtttattta                                                                        <  1:1062334/148‑1 (MQ=255)
                                                                        aGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtttattta                                                                        <  1:3617576/148‑1 (MQ=255)
                                                                           aTGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCa                                                                     <  2:1580594/148‑1 (MQ=255)
                                                                            tGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTCTATTCG‑GAAATAATGTATTTGCCTGAGCCAGAAGCACCACAATATTTCATTAGACCTGGGGCGGCGTTATTTATCAc                                                                    >  1:3782529/1‑148 (MQ=255)
                                                                             ggTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCAcc                                                                   <  1:823529/148‑1 (MQ=255)
                                                                                 tCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTACTCAATGCG‑CAAATAATGAATTTCCAATATCCAGACGCCTCACATTATTGCATTCGAAGTGCTGCGCCTTTATTTATCAAcagca                                                               >  2:382249/1‑148 (MQ=255)
                                                                                 tCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTCTATGCG‑AAAATAATGAATTGCCAAGAGCCAGACGCAGCACATTATTGCATTCGACGTGCTGCGCCTTTTTTTATAACcagca                                                               >  2:382246/1‑148 (MQ=255)
                                                                                     tGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGaa                                                           <  2:2402397/148‑1 (MQ=255)
                                                                                      gATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGaaa                                                          <  2:55298/148‑1 (MQ=255)
                                                                                       aTTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATGCG‑AAAATAATGAATTTCCATGAGCCAGACGCAGCACATTCATTCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGaaaa                                                         >  2:2292413/1‑147 (MQ=255)
                                                                                       aTTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTTCATTAGAAGTGCTGCGCCATTATTTATAACCAGCAGGAAAc                                                         >  2:3420335/1‑148 (MQ=255)
                                                                                         tGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTGAATTTATCTATTCG‑AAAATAATGAAATTGCATGAGCCAGACCCAGCACCTTATTGCATTAGACGTTCTGCGCCTTTTTTTATAAACAGCACGAAACGc                                                       >  1:2189043/1‑148 (MQ=255)
                                                                                         tGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTAATCTATTCG‑AAAAAAATTTATTTGCATGAGCCAGACGCAGCCCAATCTTTAAATAGACGTGGGGGGGCTTTTTTTTTAAACAGCACGAAAAGc                                                       >  1:2715503/1‑148 (MQ=255)
                                                                                         tGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTAAAAAATTCG‑AAAATAATGAAATTCCCTGAGCCACACGCAACACATTCTTTCAATAGACGTTCTGAGCCTTTAATTTTAACACGCATGAAACGc                                                       >  2:3201078/1‑148 (MQ=255)
                                                                                          gCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGcc                                                      <  1:2295385/148‑1 (MQ=255)
                                                                                              aCCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGt                                                  <  2:2343949/148‑1 (MQ=255)
                                                                                              aCCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGt                                                  <  2:151821/148‑1 (MQ=255)
                                                                                              aCCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGt                                                  <  1:1479697/148‑1 (MQ=255)
                                                                                               ccGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACTCTATGCG‑AAAATAATGAATTGCCATGTGCCAGACCCAGCACATTCTTGCCTTCGACGTGCTGCGCCTTTATTTATAACCAGCAGGAAACGCCTTGTc                                                 >  2:446224/1‑148 (MQ=255)
                                                                                                cGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTcc                                                <  1:991735/148‑1 (MQ=255)
                                                                                                  tttGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCAt                                              >  2:205903/1‑148 (MQ=255)
                                                                                                    tGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAg                                            <  1:1851571/148‑1 (MQ=255)
                                                                                                     gCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGa                                           <  2:3583831/148‑1 (MQ=255)
                                                                                                         aTTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑CAAATAATTAATTTCCCTGAGCCCCACGCAGCACATTCTTTCCTTCGAAGTTCTGCGCCGTTATTTATCACCACCAGGAAAACCCATGTCCAAAGACGcc                                       >  2:2341349/1‑148 (MQ=255)
                                                                                                           tATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATTCG‑AAAAAAATGAAATTCCATGAGCCACGAGCACCACATTCTTGCATTCGACGTGCTGCGCCGGTATTTATAACCAGCAGGAAACCCCTTGTCCATATACGcccc                                     >  2:2719037/1‑148 (MQ=255)
                                                                                                              cGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTc                                  <  2:2646335/148‑1 (MQ=255)
                                                                                                                aCTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCca                                <  2:805421/148‑1 (MQ=255)
                                                                                                                 cTTGATCCACACAGTCGATTTTTATCATTTACTCTATGCG‑AAAATAATGAAATGCCATGAGCCAGACGCAGCACAATCTTTCATTCGACGTGCTGCGCCTTTATTTATAACCACCAGGAAAAGCCTTGTCCATAGACGCCCCGTCcac                               >  2:749889/1‑148 (MQ=255)
                                                                                                                      tCCACACAGTCGATTTTTATAAATGACTCTATGCG‑AAAAAAATGAAATTCCATGAGCCAGACGCAGCACAATATTGCATTCGACGTGCTGCGCCGTTATTTATCAACACCAGGAAACGCCGTGTCCATAGACGCCCCGACcacaatcg                          >  2:1719661/1‑144 (MQ=255)
                                                                                                                      tCCACACAGTCGATGTTTATCATTGACTCTATTCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAAAGCCTTGTCCATATACGCCCCATCCACATgcg                          >  2:717807/1‑148 (MQ=255)
                                                                                                                       ccACACAGTCGATTTTTATAAATTAAACAATTCC‑AAAAAAAAGAAATGCCAAGAGCCCGACCCCGCACAATCTTGCATTCGACGTGCTGCGCCTGTATTTTTAACCACCAGCAAACCCCTAGTACAAATAAGCCCCAGACACAAgcgc                         >  2:676005/1‑148 (MQ=255)
                                                                                                                              gTCGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGa                  >  2:3128945/1‑148 (MQ=255)
                                                                                                                                cGATTTTTATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGaaa                <  2:1446486/148‑1 (MQ=255)
                                                                                                                                   tttttATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACct             >  1:546557/1‑148 (MQ=255)
                                                                                                                                   tttttATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACct             <  2:1258941/148‑1 (MQ=255)
                                                                                                                                    ttttATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACctc            >  2:3253903/1‑148 (MQ=255)
                                                                                                                                      ttATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCATTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTa          <  1:683055/148‑1 (MQ=255)
                                                                                                                                       tATCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTAt         <  2:1232470/148‑1 (MQ=255)
                                                                                                                                        aTCTTTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTAtt        <  1:3007866/148‑1 (MQ=255)
                                                                                                                                        aTCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTAtt        <  1:1039000/148‑1 (MQ=255)
                                                                                                                                         tCATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTc       <  1:1238938/148‑1 (MQ=255)
                                                                                                                                          cATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTcc      >  1:1904167/1‑148 (MQ=255)
                                                                                                                                          cATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTcc      <  1:2634411/148‑1 (MQ=255)
                                                                                                                                          cATTGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTcc      >  1:1320803/1‑148 (MQ=255)
                                                                                                                                            ttGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAg    >  1:452630/1‑148 (MQ=255)
                                                                                                                                            ttGACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAg    <  2:1918656/148‑1 (MQ=255)
                                                                                                                                              gACTCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTg  <  2:3150073/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                 
GATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCG‑AAAATAATGAATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTG  >  CP009273/2004388‑2004677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑