| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,724 | G→T | 28.2% | intergenic (‑41/+267) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,724 | 0 | G | T | 28.2% | 368.8 / 34.8 | 200 | intergenic (‑41/+267) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base G (68/67); new base T (34/22); total (107/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 204 total aligned reads displayed.
CTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAT > CP009273/2170578‑2170871 | tACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGAGACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGaa < 2:2014895/148‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGaaa < 1:1740322/148‑1 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTTGTTTTAAAAATAT‑AATTAAat > 2:1002909/1‑148 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAat < 2:1584500/148‑1 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAatt < 1:3170390/148‑1 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAattat < 1:527219/148‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAattatt < 2:1140410/148‑1 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTGAAAATAT‑AATGAAATTAttt > 2:2861805/1‑148 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTAttt < 2:2722200/148‑1 (MQ=255) cTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAATAT‑AAAGAAAATATTTg > 2:3599863/1‑148 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGt < 1:403288/148‑1 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGt < 2:2618872/148‑1 (MQ=255) tGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGTTTTTAAAAAAT‑AATTTAAATAtttttt > 1:459686/1‑148 (MQ=255) cATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGtttt < 1:3054965/148‑1 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAATAT‑AATTAAAATATttttttttt > 2:2743110/1‑147 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCATTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATAT‑AATGAAATTATTTGTTTTT‑a > 2:3628537/1‑148 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑aa < 1:2582942/148‑1 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑aa < 1:2659265/148‑1 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑aa < 2:1867511/148‑1 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGTTTTTTATTTTAAAAAAA‑AAAAAAAATATttttttttta > 1:329233/1‑146 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑aaa < 1:381888/148‑1 (MQ=255) tttCGAGATTGTGAATATTGCATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAat < 2:3131282/148‑1 (MQ=255) ttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAAAAT‑AATGAAATTATTTTTTTTT‑TAata > 2:2978640/1‑148 (MQ=255) ttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTGAAAAAAA‑AAATAAAATATTTTTTTTT‑TAata > 1:2918342/1‑148 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCga < 2:335999/148‑1 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTCAAAATATAAATAAAATTATTT‑TTTTT‑AAATATAgat > 2:821817/1‑147 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCgag < 1:1518731/148‑1 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAAAATagag > 2:2737503/1‑148 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATAT‑AATGAAAATATTTGTTTTT‑AAATATctat > 2:2135214/1‑145 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTTTGTTTTGGATTTCAAAATAT‑AATGAAATTATTTTTTTTT‑AAATATCgag > 2:207761/1‑148 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCgaga < 1:3375811/148‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCgaga < 1:1083454/148‑1 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGTTTTCAAAATAT‑AATTTAATTATTTTTTTTT‑TTatatattgttt > 1:3661593/1‑141 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATa < 2:1353506/148‑1 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAAAAA‑AAAGAAAATATTTTTTTTT‑AAATATCGAGATa > 2:1404085/1‑148 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTCAAAAAAT‑AATGTAATTATTTTTTTTT‑AAATATAGAGTTa > 1:952534/1‑148 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACg < 2:224602/148‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATc < 1:3439991/148‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTGTGTTTTTGATTTCAAAATAT‑AATGAAATTATTTTTTTTT‑TAATATAGAGATAACCAta > 1:2798327/1‑147 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATca < 2:3609271/148‑1 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATAT‑AATGTAATTATTTTTTTTT‑TAATATCGAGATAAAGATAACaaa > 2:517480/1‑148 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACaaaa < 1:1002909/148‑1 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTGTTTGGGTTTAAAAATAA‑AAATAAATTATTTTTTTTT‑TAATATAGAGATAACGATAACaaaaaa > 1:915509/1‑147 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTGAAAAAAT‑AATAAAATTATTTTTTTTT‑TAATATTGAGGTTAAGATaaaaaaaaa > 1:3648489/1‑147 (MQ=255) aaCCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATAT‑AATGAAATTATTTTTTTTT‑AAGAATAGAGATAAAGATAACAAAAAACACaa > 2:1919802/1‑148 (MQ=255) cATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGTTTTTAAAATAT‑AATTGAATTATTTTTTTTT‑AAATATAGGGATTAAGATGAAGAAAACCAccaaattt > 1:1579537/1‑141 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTGAAAATAT‑AATGAAATTATTTGTTTTT‑TAATATCGGGATAACGATCACACAAACGACACTATGgaaa > 2:2786636/1‑148 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGATTTGTCGATACCACGTAAATTTTCATATCCTGTCGTTTGTTTTCTATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGATATAACGATCACAAAAACGACAATATGaaaa < 2:2377077/148‑1 (MQ=255) aaCCGCCGCGCTGTGCGTGGTTAAGAATCTGCTTTGTCGAAACCACTTACTTTTACATCTCCTGGCGTTTTTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGTGATAACTAACACAAACACGACAATATGaaaa < 2:1947946/148‑1 (MQ=255) gccgcGCTGTGCGTTGTTCAGAATCTGCTTTGTCGATACCCCGAACATTTTCATATCCTGTCGTTTTTTTTCGATTTCAAAATAT‑AATTAATTTATTTGTTTTT‑AAATATCGAGATAACTATCACAAACACGACAATATGAAAattat < 2:1699053/148‑1 (MQ=255) cTGTGCGTTGTACAGAATCTGCTTTGTCGATACCACTTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACCATCACAAACACGACAATATGAAAATTATTCgagg < 2:647494/148‑1 (MQ=255) tgtgCGTTGTTCAGCATCTGCTTGGTCGATACCACGAACATTTTCATATCCGGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCgagga < 2:3743191/148‑1 (MQ=255) tgCGTTGTACAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGt < 2:1537703/148‑1 (MQ=255) gatctgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCTTTTTTTTTCTATTTAAAAATAT‑AATTAAATTATTTTTTTTT‑AAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTg < 2:23528/144‑1 (MQ=255) cGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTGAAAAAAT‑AAATAAAATATTTTTTTTT‑TAATATAGAGATAACAAACACAAAAAAAAAAAAAATAAAATTATTAGAGGGGTgt > 1:611044/1‑147 (MQ=255) gttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTGAAAATAT‑AATTTAAATATTTTTTTTT‑AAATATAGAGATAAACATAACAAAAAAGACAATAATAAAAATATTAgaggggggta > 2:3609525/1‑142 (MQ=255) gtgtttCAGAATCTGCTTTGTCGATACAACTTACATTTTAATATCCTGTCTTTTTTTTTCGTTTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGaa < 2:2592512/144‑1 (MQ=255) tgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTTAAAATAT‑AAATAAAATATTTTTTTTT‑TAAAATAGAGATAAAGATAACAAAAAACAAAAAATTAAAATTTTTTGAGGGGTTaaaa > 1:2195763/1‑147 (MQ=255) tgttCAGCATCTGATTTGTCGATCCCCCGTAATTTTTAATATCCTGTCTTTTGTTTTCGATTTAAAAATAT‑AATGAATTTTTTTTTTTTT‑AAATATCGAGATAACTATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAg < 1:489561/148‑1 (MQ=255) ttCTGCTTTGTCTATACAACCTACATTTTAATTTACTTTATTTTTTTTTCCATTTCAAATTTT‑TTTGAAATTATTTGTTTTT‑AATTATCGATAAAACTTTAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaaaa < 2:1085553/147‑1 (MQ=255) cTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAATAT‑AAAGAAAATAATTTTTTTT‑AAATATAGAGATAAACATAAAAAAAAACACAAAAATAAAAAAAATAGAGGAGTTGAATGCaaaaaaaa > 1:635977/1‑147 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTGAAAAAAA‑AATGAAAATATTTTTTTTT‑AAATAAAGAGAGAACCATCACAAAAACGACAATATGAAAATTATTAGTGGTGTGAAAGGCAAAAAAAAGGcc > 2:1032877/1‑148 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAAAAA‑AATTTAAATATTTTTTTTT‑TAAAATCGAGATAAACAACACAAAAACGACAAAATTAAAAATATTAGAGGAGTGAAAGGCaaaaaaaacgcc > 2:88406/1‑143 (MQ=255) ctaTACCACTTAATTTTTATTATCGTTTTTTTTTTTTTCTATTAAAAAATAT‑AATTAATTTTTTTTTTTTA‑AAATATCTATAAAACGAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCg < 1:2743110/146‑1 (MQ=255) cACGTAAATTTTCATATCCTGTCTTTTGTTTTCTATTTCAAATTAA‑AATTAATTTTTTTTTTTTA‑AAATATCGATATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAggg < 1:2476639/148‑1 (MQ=255) ttACTTTTTAATTTCCTTTGTTTTGTTTTGGTTTTAAAATTAT‑ATTTAAATT‑TTTGTTTTTAAAATATCGATATAACTATAAAAAAAACGACAATATGAAAATTATTCGTGGATTGAATGGCAAAAAAACGGCCTCCCGATAGGGAAg < 2:324541/147‑1 (MQ=255) gTACATTTTAATATCCTGTCGTTTGTTTTCGATTTAAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAg < 2:1164807/148‑1 (MQ=255) taaaTTTACATACCGTGTCGTTTGTTTTCGTTTTAAAAATAT‑ACTTAAATTTTTGTTTTTT‑AAATATCGATTTAAGTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc < 2:1329769/145‑1 (MQ=255) aCATTTTCATATCCTGTCGTGTGTTTTAGCTTTAAAAATAT‑AATGAAAATATTTTTTTTT‑AAATATAGAGATAAAGATCACAAAAACGACAATATGGAAAGTATTAGCGGAGGGAAAGGCAAAAAAAAGGCCTCCCGCGAGGGGAGcc > 2:2397784/1‑148 (MQ=255) taatttCCTGTCTTTTTTTTTCGATTTAAAAATAT‑AATTAAATTATTTTTTTTT‑AAATATCGAGATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCa < 2:3661378/143‑1 (MQ=255) tCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACTATCACAAAAAAGACAATAAGAAAATTATTCGAGGACTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgt > 2:182477/1‑148 (MQ=255) cGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg < 2:175238/148‑1 (MQ=255) tttgtttTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 1:2316305/1‑148 (MQ=255) tttgtttTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 1:3578013/1‑148 (MQ=255) tttgtttTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 1:1166691/1‑148 (MQ=255) tttgtttTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 1:3783880/1‑148 (MQ=255) tttttttCTATTTCAAAATAT‑AATCAAATTATTTTTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt < 2:716906/145‑1 (MQ=255) ttgtttTCTATTACAAAATAT‑AATCAATTTTTTTTTTTTT‑AAATATCGATATAACCAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt < 1:90044/148‑1 (MQ=255) tgtttTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt > 2:3541925/1‑148 (MQ=255) tttCTATTAAAAAATAT‑ATTTAATTTTTTTTTTTTA‑AAATATCTAAAAAACTACCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt < 1:2952774/148‑1 (MQ=255) tttCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt > 2:1994526/1‑148 (MQ=255) ttCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 2:941755/1‑148 (MQ=255) ttacAAAATAT‑AAGGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa < 2:2942819/145‑1 (MQ=255) ttCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 1:455547/1‑148 (MQ=255) ttCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 1:2127338/1‑148 (MQ=255) ttCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 1:45515/1‑148 (MQ=255) aaaTAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAATCGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:439633/1‑148 (MQ=255) aaTAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgt > 2:3790743/1‑148 (MQ=255) atat‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg > 1:2033638/1‑148 (MQ=255) tat‑aATGAAATTATTTGTTTTT‑AAATAACGAGATAACGATCACAAAAACGACAATATGAAATTTATTCGAGGAGTGAAAGGCAAAAAAACTGCCTCACGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTATATGCCGGATGCGgtgt > 2:851679/1‑148 (MQ=255) at‑aATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 1:1626447/1‑148 (MQ=255) at‑aATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 1:779224/1‑148 (MQ=255) at‑aATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 1:1225271/1‑148 (MQ=255) aaTGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaaa > 2:44863/1‑148 (MQ=255) aTGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGTCGGATGCGGTGTAAAc > 2:617561/1‑148 (MQ=255) aTGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc > 1:409999/1‑148 (MQ=255) tGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 2:3053534/1‑148 (MQ=255) tGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 1:516930/1‑148 (MQ=255) tGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGAAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 1:1426054/1‑148 (MQ=255) gAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt > 2:405145/1‑148 (MQ=255) | CTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AATGAAATTATTTGTTTTT‑AAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAT > CP009273/2170578‑2170871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |