| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,543,629 | G→T | 5.3% | F92L (TTC→TTA) | yfeX ← | porphyrinogen oxidase, cytoplasmic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,543,629 | 0 | G | T | 5.3% | 692.3 / 9.3 | 186 | F92L (TTC→TTA) | yfeX | porphyrinogen oxidase, cytoplasmic |
| Reads supporting (aligned to +/- strand): ref base G (114/61); new base T (5/5); total (120/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 186 total aligned reads displayed.
AAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAA > CP009273/2543483‑2543775 | aGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGaa > 1:3749877/1‑148 (MQ=255) gCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAAc > 2:2503274/1‑148 (MQ=255) ccGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACt < 2:2110288/148‑1 (MQ=255) cGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTg < 2:3329777/148‑1 (MQ=255) cTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTggg > 1:82170/1‑148 (MQ=255) ggTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGgtcgt > 1:2476767/1‑148 (MQ=255) ctTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAg > 1:382644/1‑148 (MQ=255) ctTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAg > 1:949673/1‑148 (MQ=255) ttCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAgg < 1:455623/148‑1 (MQ=255) ttCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAgg > 1:2010701/1‑148 (MQ=255) aaCCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCt < 1:2634303/148‑1 (MQ=255) aaCCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCt < 1:1441469/148‑1 (MQ=255) cccAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCAGCGCAAGGCCttt > 1:1137178/1‑148 (MQ=255) cAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTAc < 2:3102129/148‑1 (MQ=255) aaCGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTAcc > 2:252365/1‑148 (MQ=255) aCGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCCAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCCAGGCCTTTACCg > 2:1133537/1‑148 (MQ=255) aCGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCg > 2:3040019/1‑148 (MQ=255) ggAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGACGTTTACGTCGTGACGCAGAGACAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCCAGGCCTTTACCGTa > 2:3069590/1‑148 (MQ=255) ggAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTa > 2:3069806/1‑148 (MQ=255) ggAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTa < 1:2324227/148‑1 (MQ=255) gAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCTAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAg < 2:2614685/148‑1 (MQ=255) aGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGcc > 2:102869/1‑148 (MQ=255) tGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGaa > 2:3391251/1‑148 (MQ=255) tGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGaa > 1:1081717/1‑148 (MQ=255) ggATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCCAGGCCTTTAACGTAGCCCGGaaa > 1:855214/1‑148 (MQ=255) ggATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGaaa < 1:1154714/148‑1 (MQ=255) ggATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGaaa > 1:3433062/1‑148 (MQ=255) ctctTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCt < 1:2304189/148‑1 (MQ=255) ctctTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCt > 1:3449153/1‑148 (MQ=255) tcttctTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTGGTGACGCAGAGACAGAATGTGGATCAACACATCGAACTGGGTCGTAGGCGCAAGGGCTATACCGTCGCCCGGAAAATCtt > 2:2677255/1‑148 (MQ=255) tcttctTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCtt > 2:2677312/1‑148 (MQ=255) cttcttTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCTAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCttt < 1:3313197/148‑1 (MQ=255) cttcttTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCttt < 1:263241/148‑1 (MQ=255) cttcttTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCttt < 1:266749/148‑1 (MQ=255) cttcttTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAACAATGTGGATCAACACATCGACCTGGGTCGTCGGCGCAAGGCCTTGACCGTAGCCCGGAAAATCtgg > 2:977761/1‑146 (MQ=255) ttcttTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTc < 2:3024209/148‑1 (MQ=255) tcttTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCa > 1:585946/1‑148 (MQ=255) cttTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAg > 2:3810357/1‑148 (MQ=255) ttCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGct > 2:1229336/1‑148 (MQ=255) ttCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGGCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGct > 1:1483630/1‑148 (MQ=255) aCTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCtctt < 1:1316423/148‑1 (MQ=255) aCTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCtctt < 1:3224794/148‑1 (MQ=255) tCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCCAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTg > 1:1805936/1‑148 (MQ=255) tCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTg > 2:1083209/1‑148 (MQ=255) tGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGTATCAACACATAGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGcccc > 1:556326/1‑148 (MQ=255) tGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCCAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGcccc > 1:2956931/1‑148 (MQ=255) aGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAAc > 2:2289207/1‑148 (MQ=255) gTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAAcg < 1:2827440/148‑1 (MQ=255) tCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCCTAGCCCGGAAAAACTTTCAGCTCATCTGCCCCAAcgc > 1:1887951/1‑148 (MQ=255) ccAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAAcgccgc < 1:3554094/148‑1 (MQ=255) cAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAAcgccgcc > 2:3269812/1‑148 (MQ=255) aaaGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCGTCTGCCCCAAcgccgccg > 2:20946/1‑148 (MQ=255) aGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCt > 2:1178272/1‑148 (MQ=255) aGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTATTCTGCCCCAACGCCGCCGCt < 1:1657575/148‑1 (MQ=255) gCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCa > 1:2508845/1‑148 (MQ=255) ttCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCaga < 1:521235/148‑1 (MQ=255) tCCATCGCCGCCTGGGCGACAGAGAAGTTAACGTCGTGACGCAGAGAAAGAAAGTGGAACAACACAACGAACTGGGTCGTCGGCGCACGGCCTTTACCGTAGCCCGGAAAATCATTCAGCTCTTCTGCCCCAACGCCGCCGCTCagag > 1:303832/1‑148 (MQ=255) tCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCTAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAgcgcg > 2:3527853/1‑148 (MQ=255) cgccTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAg < 1:2174825/148‑1 (MQ=255) ccTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGgt > 1:2453852/1‑148 (MQ=255) tGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGgtgt < 1:3681562/148‑1 (MQ=255) ggCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGtgttg < 2:2219941/148‑1 (MQ=255) ggCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGtgttg < 2:1841606/148‑1 (MQ=255) ggCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGtgttg < 2:3749877/148‑1 (MQ=255) cAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTAcc > 2:3178254/1‑148 (MQ=255) cAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTAcc > 1:3622250/1‑148 (MQ=255) cAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTAcc > 2:3178258/1‑148 (MQ=255) cAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTAcc > 2:3269598/1‑148 (MQ=255) cAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTAcc > 2:1328263/1‑148 (MQ=255) gaAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAg > 1:3477733/1‑148 (MQ=255) gaAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAg > 1:2094919/1‑148 (MQ=255) aaGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAgg > 2:1300580/1‑148 (MQ=255) ttACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAac > 2:3201515/1‑148 (MQ=255) cgtGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGc > 2:2350373/1‑148 (MQ=255) aCGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCa < 2:1631505/148‑1 (MQ=255) aCGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCa > 1:3082670/1‑148 (MQ=255) gCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAg < 2:1112456/148‑1 (MQ=255) cAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGa < 2:1208090/148‑1 (MQ=255) cAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTGACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGa < 2:2312983/148‑1 (MQ=255) gagaAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATg > 2:1460322/1‑148 (MQ=255) gaaagaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATgcg < 1:373293/148‑1 (MQ=255) gaaagaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATgcg < 1:373237/148‑1 (MQ=255) gaaagaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATgcg < 2:565594/148‑1 (MQ=255) aaagaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATgcgc > 1:19253/1‑148 (MQ=255) aaagaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATgcgc > 1:1526702/1‑148 (MQ=255) gaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTc > 1:246749/1‑148 (MQ=255) gaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTc > 1:1818665/1‑148 (MQ=255) gaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTc > 2:2320203/1‑148 (MQ=255) gaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTc < 2:1378118/148‑1 (MQ=255) gaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTc > 1:2176845/1‑148 (MQ=255) tgtgGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCgg > 1:3199782/1‑148 (MQ=255) tgtgGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCgg > 2:527570/1‑148 (MQ=255) gtgGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCggg > 1:3007996/1‑148 (MQ=255) aaCACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCg < 2:2173079/148‑1 (MQ=255) acacATCTAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAACTCTTTCAGCTCTTCTGCCCCCACGCCGGCGCTCAGAGAGCGCCAGGTGTTGTTACCAAAGGGAACCCCCGCACCAAGATGCGCGTCCGGGAATTTCGc < 1:2416513/148‑1 (MQ=255) acacATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGc > 2:1922924/1‑148 (MQ=255) cacaTCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCt > 1:1054381/1‑148 (MQ=255) caTCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTc > 2:675355/1‑148 (MQ=255) tCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCaa > 1:3654518/1‑148 (MQ=255) cGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCaaa > 2:834380/1‑148 (MQ=255) | AAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAA > CP009273/2543483‑2543775 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |