| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,628,166 | G→T | 15.0% | A192A (GCG→GCT) | xseA → | exonuclease VII, large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,628,166 | 0 | G | T | 15.0% | 734.7 / 71.3 | 238 | A192A (GCG→GCT) | xseA | exonuclease VII, large subunit |
| Reads supporting (aligned to +/- strand): ref base G (101/101); new base T (16/20); total (117/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 241 total aligned reads displayed.
TGTGATCACCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAGCGCCGTCGGGCATGAGACGGAT > CP009273/2628019‑2628313 | gtgATCACCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGa > 2:474000/1‑148 (MQ=255) gtgATCACCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGa > 2:473961/1‑148 (MQ=255) aTCACCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATc < 2:3253538/148‑1 (MQ=255) aTCACCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATc < 2:3253236/148‑1 (MQ=255) tCACCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCa > 2:2786786/1‑148 (MQ=255) tCACCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCa > 2:1031211/1‑148 (MQ=255) tCACCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCa > 1:2477470/1‑148 (MQ=255) tCACCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCa > 1:2352561/1‑148 (MQ=255) aCCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAgc < 1:1101908/148‑1 (MQ=255) aaaaCCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATg < 2:152040/148‑1 (MQ=255) aaaaCCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATg < 1:2967744/148‑1 (MQ=255) aaaaCCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATg > 1:1984889/1‑148 (MQ=255) aaaCCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGa > 2:3125950/1‑148 (MQ=255) aCCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGt > 1:1737874/1‑148 (MQ=255) ctgcGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGt < 1:3609911/148‑1 (MQ=255) tgcGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCTAATCAGCGCAATGAGTGCGACGTa < 1:1019932/148‑1 (MQ=255) gcgcTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTAt < 2:805716/148‑1 (MQ=255) gcgcTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTAt < 1:922941/148‑1 (MQ=255) gcTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTg > 2:2604120/1‑148 (MQ=255) cTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCTAATCAGCGCAATGAGTGCGACGTATTGa < 1:760748/148‑1 (MQ=255) cTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGa < 1:1178260/148‑1 (MQ=255) cTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGa < 2:632582/148‑1 (MQ=255) aCATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCTAATCAGCGCAATGAGTGCGACGTATTGAtc > 1:2676937/1‑148 (MQ=255) cATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCTAATCAGCGCAATGAGTGCGACGTATTGAtcg < 2:1318870/148‑1 (MQ=255) aTGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGAtcgt > 2:531599/1‑148 (MQ=255) gATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGAtcgtcg > 1:3438101/1‑148 (MQ=255) tatTTTGCATGTGTTACAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCggg < 2:216697/148‑1 (MQ=255) tatTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCggg < 1:3378326/148‑1 (MQ=255) atTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCTAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGgc > 1:1830447/1‑148 (MQ=255) tttGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGgcgc > 1:2854581/1‑148 (MQ=255) tgtTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGcggcggcgg > 1:180159/1‑148 (MQ=255) gtTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCTAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGt < 1:3393847/148‑1 (MQ=255) gtTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGt < 1:2604120/148‑1 (MQ=255) gtTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGt < 1:3515543/148‑1 (MQ=255) gtTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGt > 1:1640256/1‑148 (MQ=255) aaaaCGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCg < 1:2165856/148‑1 (MQ=255) aaaCGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGc > 2:105639/1‑148 (MQ=255) aaCGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCt > 2:3288588/1‑148 (MQ=255) tCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGaa > 2:3634912/1‑148 (MQ=255) cgcgATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTg > 1:2139740/1‑107 (MQ=255) cgcgATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGacg > 2:1862851/1‑146 (MQ=255) gcgATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGa < 2:1700772/148‑1 (MQ=255) gcgATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGa < 1:1893590/148‑1 (MQ=255) gcgATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGa < 1:1056830/148‑1 (MQ=255) aTCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCCAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGAttt > 2:2331778/1‑148 (MQ=255) aTCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCTAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGAttt < 2:2903439/148‑1 (MQ=255) aTCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGAttt > 1:1175254/1‑148 (MQ=255) tCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTa > 2:1003285/1‑148 (MQ=255) tCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTa > 2:2470504/1‑148 (MQ=255) ccTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTAt > 1:2730633/1‑148 (MQ=255) ttCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATgg < 2:746485/148‑1 (MQ=255) tctGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCTAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGt < 1:446296/148‑1 (MQ=255) ctGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCTAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGtt < 2:2364257/148‑1 (MQ=255) ctGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGtt > 1:3732997/1‑148 (MQ=255) ctGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGtt < 2:3438101/148‑1 (MQ=255) tGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGttt < 2:2477471/148‑1 (MQ=255) cGGTGCTCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTaa < 2:2582755/148‑1 (MQ=255) gTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAacg < 1:674498/148‑1 (MQ=255) gTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAacg > 2:1959456/1‑148 (MQ=255) tGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTCTGGAGTTTTAacga > 2:2783059/1‑148 (MQ=255) gATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAacgac > 1:446048/1‑148 (MQ=255) atcatcTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAacgacg > 2:65293/1‑148 (MQ=255) tcatcTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCTAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAAcgacga > 2:1481247/1‑148 (MQ=255) tcatcTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAAcgacga > 2:2971976/1‑148 (MQ=255) catcTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGaa < 1:1003896/148‑1 (MQ=255) cTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAAcgc > 1:214552/1‑148 (MQ=255) aCCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGt < 2:1753672/148‑1 (MQ=255) ccTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAg > 2:2254576/1‑148 (MQ=255) gTTCAGGGCGATGACGCGCCGTGGCAAATTGTTCGCGCATTTGAACTGGCTAATCAGCGCTATGAGTGAGTCGTATTGATCGTCTGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGTGTTTTAACGAAGAACGCGTAGCTCGGGCGa < 2:3546103/148‑1 (MQ=255) gTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGa < 1:2219137/148‑1 (MQ=255) gTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGa < 1:975615/148‑1 (MQ=255) ttCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGAt > 1:2668456/1‑148 (MQ=255) ttCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGAt > 1:3301009/1‑148 (MQ=255) ttCAGGGCGATGACGCGCCGGGGCAAATTGTTAGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGAt > 2:1883559/1‑148 (MQ=255) tCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGAtt < 1:473972/148‑1 (MQ=255) tCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGAtt < 2:429604/148‑1 (MQ=255) cAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCACTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGAttt < 2:2204307/148‑1 (MQ=255) gggCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCTAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGAttttt > 2:3188186/1‑148 (MQ=255) ggCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTa < 1:2534667/148‑1 (MQ=255) ggCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTa < 1:134833/148‑1 (MQ=255) aTGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAg > 2:2627331/1‑148 (MQ=255) tGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGc < 2:2658132/148‑1 (MQ=255) gcgcCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCa < 1:1031211/148‑1 (MQ=255) ccGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTc < 1:3056462/148‑1 (MQ=255) ggggCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCg < 2:446048/148‑1 (MQ=255) gggCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCgg < 2:3654684/148‑1 (MQ=255) gggCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCgg > 1:2872502/1‑148 (MQ=255) gggCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCgg > 1:1418978/1‑148 (MQ=255) cAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTg > 1:472891/1‑148 (MQ=255) tGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAgc > 2:3182190/1‑148 (MQ=255) tGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAgc > 2:2091153/1‑148 (MQ=255) tGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAgc > 2:162203/1‑148 (MQ=255) tGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAgc > 1:2066378/1‑148 (MQ=255) cATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAGCGCCGTCggg > 1:577821/1‑148 (MQ=255) aTTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAGCGCCGTCGGGc > 2:3132543/1‑148 (MQ=255) aTTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAGCGCCGTCGGGc < 2:3723398/148‑1 (MQ=255) tGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAGCGCCGTCGGGCAt < 2:1737874/148‑1 (MQ=255) tGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAGCGCCGTCGGGCAt < 2:2061145/148‑1 (MQ=255) cTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAGCGCCGTCGGGCATgaga < 1:286484/148‑1 (MQ=255) gCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAGCGCCGTCGGGCATGAGACgg < 1:3353842/148‑1 (MQ=255) | TGTGATCACCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAGCGCCGTCGGGCATGAGACGGAT > CP009273/2628019‑2628313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |