| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,831,929 | T→A | 100% | E232V (GAA→GTA) | ascG ← | asc operon transcriptional repressor; prpBC operon repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,831,929 | 0 | T | A | 99.0% | 706.0 / ‑2.5 | 215 | E232V (GAA→GTA) | ascG | asc operon transcriptional repressor; prpBC operon repressor |
| Reads supporting (aligned to +/- strand): ref base T (0/3); new base A (95/117); total (95/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 218 total aligned reads displayed.
GCAATAGCGATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTTCTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATCCATCGAGCCGGTAAGGA > CP009273/2831782‑2832073 | gCAATAGCGATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACAttt < 2:2565591/148‑1 (MQ=255) aTAGCGATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTa < 1:2654996/148‑1 (MQ=255) aTAGCGATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTa < 1:675939/148‑1 (MQ=255) aTAGCGATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGAGCTCGTGTAACTCTTTCATCGCACCTATCTCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTa < 1:2651227/148‑1 (MQ=255) tAGCGATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATtactac < 1:3272990/148‑1 (MQ=255) tAGCGATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATtactac > 1:608904/1‑148 (MQ=255) aGCGATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTAcc > 1:338754/1‑148 (MQ=255) gCGATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTAccc < 1:1615012/148‑1 (MQ=255) gCGATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTAccc > 1:129262/1‑148 (MQ=255) gATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCt < 1:2992895/148‑1 (MQ=255) gATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCt < 1:923140/148‑1 (MQ=255) tatCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTc > 1:1832622/1‑148 (MQ=255) tatCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTAATGGCAACTAACGCGCAAAATTTAGCCCCACGTTCGAGCAACAATACTACCCCATc > 1:1350512/1‑148 (MQ=255) atcatcGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCg > 1:931690/1‑148 (MQ=255) tcatcGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCGAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCgg > 1:3656809/1‑148 (MQ=255) gAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTTACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCg < 2:3755810/148‑1 (MQ=255) ccGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTgg > 1:3406559/1‑148 (MQ=255) aTAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAg > 1:2552583/1‑148 (MQ=255) cTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGt < 1:1585728/148‑1 (MQ=255) acacCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCa > 1:3187031/1‑148 (MQ=255) acacCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCa < 2:3050405/148‑1 (MQ=255) acacCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCa < 1:418527/148‑1 (MQ=255) cacCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCAt < 2:920150/148‑1 (MQ=255) cacCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCAt < 2:3267555/148‑1 (MQ=255) ccTGCTCTGGCACCGCTACGACGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACAGGCAACAAACGCGCGAAAATTATACCCACCTTAGAGCAACATTAATACCCCTTCGGCCCCGCTGGCAGGCGTCCAttt > 1:1471101/1‑148 (MQ=255) cTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTa < 2:2078732/148‑1 (MQ=255) gCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTAcc < 2:1380404/148‑1 (MQ=255) gCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTAcc < 2:281260/148‑1 (MQ=255) gCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTAcc > 2:3353930/1‑148 (MQ=255) cACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCg < 1:2633493/148‑1 (MQ=255) cACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCg < 1:865159/148‑1 (MQ=255) aCCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACAACCCCGTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGa > 1:1907957/1‑148 (MQ=255) ccGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCCTTTACCGTTAGCGAt > 1:56314/1‑148 (MQ=255) cGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTTCTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATa < 2:3799315/148‑1 (MQ=255) gCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCAGATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATaa < 1:3137609/148‑1 (MQ=255) cTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCGATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAg > 1:1404876/1‑148 (MQ=255) cTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAg > 2:1075047/1‑148 (MQ=255) cTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAg > 1:1320557/1‑148 (MQ=255) cTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAg > 1:1404777/1‑148 (MQ=255) cTACGCCGCGCTCGTGAAACGATTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTATCCCCACGTTCGAGCAACAATACTACCCCTACTGCCCCGCTCGCAGGCGTACATTTAACGTTATCGAAAAg > 2:957405/1‑148 (MQ=255) tACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGt < 2:3453191/148‑1 (MQ=255) cgccgcGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGttt > 2:2014386/1‑148 (MQ=255) gccgcGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGtttt < 1:3339461/148‑1 (MQ=255) gccgcGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGtttt < 1:1899533/148‑1 (MQ=255) gcgcTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCa < 1:3554425/148‑1 (MQ=255) cgcTCGTGTAACTGTTTCTTCGGAGCTATCGGGTTATCGTCGTTTCTGTGAACTTACGCGCTATATTTAGGGCCAGTTTCGAGCAACATTTCTACCGCTTCGTCGCCGCTGGGTGGCGTCCTTTTTACGTTAGCGTTTAGTTTTTctt < 2:2927795/148‑3 (MQ=255) cgcTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCAt < 1:2052002/148‑1 (MQ=255) cgcTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCAt < 2:3064359/148‑1 (MQ=255) cTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTg < 2:2121969/148‑1 (MQ=255) tgtAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAgcg < 2:2330307/148‑1 (MQ=255) tgtAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAgcg < 1:675275/148‑1 (MQ=255) tAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCa < 1:1091262/148‑1 (MQ=255) tAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCa < 1:1968506/148‑1 (MQ=255) aaCGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCaa > 2:81899/1‑148 (MQ=255) cTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATAcc < 2:1689765/148‑1 (MQ=255) ttCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCAt > 1:771237/1‑148 (MQ=255) cATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCAtgc < 2:3510552/148‑1 (MQ=255) aTCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCAtgct > 2:3436811/1‑148 (MQ=255) cGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCAtgctgc > 1:1254111/1‑148 (MQ=255) gCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTgcg < 2:1429466/148‑1 (MQ=255) gCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTgcg > 2:1643011/1‑148 (MQ=255) ccATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTc < 2:516898/148‑1 (MQ=255) ccATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTc < 2:2433661/148‑1 (MQ=255) ccATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTc > 2:3651604/1‑148 (MQ=255) tatCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCACTACCATGCTGCGCCAGCGCGTCttt > 2:1034195/1‑148 (MQ=255) tatCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCttt > 2:1485358/1‑148 (MQ=255) atCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTta < 2:177148/148‑1 (MQ=255) tcgtcgTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTtat < 2:1742892/148‑1 (MQ=255) tcgtcgTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTtat < 2:578276/148‑1 (MQ=255) tcgtTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATAcc < 1:3752019/148‑1 (MQ=255) ttACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCgg < 2:1126448/148‑1 (MQ=255) tACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGc > 2:891211/1‑148 (MQ=255) tGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAg < 1:68624/148‑1 (MQ=255) cAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACg > 1:3106441/1‑148 (MQ=255) aCTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGtt > 1:2304846/1‑148 (MQ=255) aCTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGtt < 1:2578194/148‑1 (MQ=255) aCTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGtt < 1:1506221/148‑1 (MQ=255) tAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCa < 1:2865883/148‑1 (MQ=255) aaCGCGCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCaa < 1:3771110/148‑1 (MQ=255) cgcgCTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATg < 1:538561/148‑1 (MQ=255) cgcTAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCt > 1:758380/1‑148 (MQ=255) tAAATTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCtggt < 1:1772799/148‑1 (MQ=255) aaTTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCtggtgg > 2:1306346/1‑148 (MQ=255) aaTTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCtggtgg > 2:2716413/1‑148 (MQ=255) aaTTTAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCtggtgg < 2:2965002/148‑1 (MQ=255) tttAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTgggg > 2:1501825/1‑148 (MQ=255) ttAGCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTggggg < 2:3141542/148‑1 (MQ=255) gCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCCGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAAt > 2:2197686/1‑148 (MQ=255) gCCCCACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAAt < 1:17937/148‑1 (MQ=255) cccACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATcc < 2:3593021/148‑1 (MQ=255) ccACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATCCa < 1:2880715/148‑1 (MQ=255) cACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATCCAt > 2:1943/1‑148 (MQ=255) cACGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATCCAt < 1:2996702/148‑1 (MQ=255) cGTTCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAAAACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATCCATCg > 2:431828/1‑148 (MQ=255) ttCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATCCATCGAg < 2:2343035/148‑1 (MQ=255) ttCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATCCATCGAg > 2:2189320/1‑148 (MQ=255) ttCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATCCATCGAg > 1:1042643/1‑148 (MQ=255) tCGAGCAACATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATCCATCGAGc > 1:1703358/1‑148 (MQ=255) aaCATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATCCATCGAGCCGGTaa < 2:2737643/148‑1 (MQ=255) cATTACTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATCCATCGAGCCGGTAAgg > 2:2650930/1‑148 (MQ=255) | GCAATAGCGATATCATCGAATCCGATAACTGACACCTGCTCTGGCACCGCTACGCCGCGCTCGTGTAACGCTTTCATCGCACCTATCGCCATATCGTCGTTACTGGCAACTAACGCGCTAAATTTAGCCCCACGTTCGAGCAACATTTCTACCCCTTCGGCCCCGCTGGCAGGCGTCCATTTACCGTTAGCGATAAGTTTTTCATTGAGCGCAATACCATGCTGCGCCAGCGCGTCTTTATACCCGGCAAGACGTTCAATGCTGGTGGGGGAATCCATCGAGCCGGTAAGGA > CP009273/2831782‑2832073 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |