Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,017,285 G→T 100% D871Y (GAC→TAC)  xdhD → putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,017,2850GT100.0% 813.4 / NA 243D871Y (GAC→TAC) xdhDputative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (147/96);  total (147/96)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 244 total aligned reads displayed.

CACGCGTACGGGTGAAATCCGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATGACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCGGAAATC  >  CP009273/3017140‑3017428
                                                                                                                                                 |                                                                                                                                               
cacGCGTACGGGTGAAATCCGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTAc                                                                                                                                               <  1:3795053/148‑1 (MQ=255)
 acGCGTACGGGTGAAATCCGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTACGAGCGAAGAGATCATTTATTACg                                                                                                                                              <  2:3568704/148‑1 (MQ=255)
     gTACGGGTGAAATCCGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGa                                                                                                                                          <  2:1929343/148‑1 (MQ=255)
              aaaTCCGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCAccc                                                                                                                                 >  2:1146288/1‑148 (MQ=255)
               aaTCCGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCg                                                                                                                                >  2:1577690/1‑148 (MQ=255)
                aTCCGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGt                                                                                                                               >  1:3581805/1‑148 (MQ=255)
                  ccGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTa                                                                                                                             <  2:2749590/148‑1 (MQ=255)
                    gCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAAc                                                                                                                           >  1:1186504/1‑148 (MQ=255)
                       tGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCCCCCGTTAAcgcg                                                                                                                        >  2:2157681/1‑148 (MQ=255)
                        ggATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGt                                                                                                                       >  2:512263/1‑148 (MQ=255)
                          aTAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGa                                                                                                                     <  1:625034/148‑1 (MQ=255)
                           tAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGAt                                                                                                                    >  2:2523021/1‑148 (MQ=255)
                            aaaTTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGAtt                                                                                                                   <  1:1538377/148‑1 (MQ=255)
                            aaaTTCTACGCCTTGCTGGACTGCGGTACAACGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGAtt                                                                                                                   <  1:2046740/148‑1 (MQ=255)
                             aaTTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACACGTTAACGCGTGAttt                                                                                                                  >  1:971209/1‑148 (MQ=255)
                              aTTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTa                                                                                                                 <  2:857788/148‑1 (MQ=255)
                                      ccTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTa                                                                                                         <  2:3488624/148‑1 (MQ=255)
                                      ccTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTa                                                                                                         >  1:1118905/1‑148 (MQ=255)
                                          gCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGgc                                                                                                     >  2:734821/1‑148 (MQ=255)
                                             ggACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCGACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCa                                                                                                  >  1:2251218/1‑148 (MQ=255)
                                              gACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCAc                                                                                                 >  1:46668/1‑148 (MQ=255)
                                              gACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCAc                                                                                                 >  1:45694/1‑148 (MQ=255)
                                                    ggTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGaaaa                                                                                           <  2:1470406/148‑1 (MQ=255)
                                                     gTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAAt                                                                                          >  1:834809/1‑148 (MQ=255)
                                                     gTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAAt                                                                                          <  2:633210/148‑1 (MQ=255)
                                                      tACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACTGCGCACCGACAAtt                                                                                         >  1:984496/1‑148 (MQ=255)
                                                      tACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAAtt                                                                                         >  2:248015/1‑148 (MQ=255)
                                                         acCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGt                                                                                      >  2:1700144/1‑148 (MQ=255)
                                                         acCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGt                                                                                      <  2:820178/148‑1 (MQ=255)
                                                         acCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGt                                                                                      >  2:533415/1‑148 (MQ=255)
                                                           cGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGa                                                                                    >  2:86068/1‑148 (MQ=255)
                                                             gTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACa                                                                                  <  2:3113794/148‑1 (MQ=255)
                                                                  tCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCcg                                                                             >  1:1054242/1‑148 (MQ=255)
                                                                   ccAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCcgc                                                                            >  1:1842377/1‑148 (MQ=255)
                                                                     agagTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGt                                                                          >  2:1047650/1‑148 (MQ=255)
                                                                       agTGAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGa                                                                        <  2:3289873/148‑1 (MQ=255)
                                                                         ttAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGAtt                                                                      >  2:1999856/1‑148 (MQ=255)
                                                                          tAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGAttt                                                                     >  2:901609/1‑148 (MQ=255)
                                                                          tAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGAttt                                                                     <  2:3786816/148‑1 (MQ=255)
                                                                             cGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCcg                                                                  <  2:1194619/148‑1 (MQ=255)
                                                                               ttGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCcgcg                                                                <  2:1988133/148‑1 (MQ=255)
                                                                               ttGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCACTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCcgcg                                                                <  1:3299205/148‑1 (MQ=255)
                                                                                tGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCgcgc                                                               >  2:2585577/1‑148 (MQ=255)
                                                                                  ggACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCtg                                                             >  1:2515852/1‑148 (MQ=255)
                                                                                  ggACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCtg                                                             >  1:2438621/1‑148 (MQ=255)
                                                                                    aCAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCtgtg                                                           <  2:3815572/148‑1 (MQ=255)
                                                                                     cAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGc                                                          <  1:2628828/148‑1 (MQ=255)
                                                                                     cAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGc                                                          >  1:1972196/1‑148 (MQ=255)
                                                                                        aTCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTgg                                                       >  2:769019/1‑148 (MQ=255)
                                                                                        aTCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTgg                                                       >  2:1702130/1‑148 (MQ=255)
                                                                                         tCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGt                                                      >  1:794846/1‑148 (MQ=255)
                                                                                         tCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGt                                                      >  1:2711464/1‑148 (MQ=255)
                                                                                              ggTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGa                                                 <  1:2813998/148‑1 (MQ=255)
                                                                                               gTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAg                                                <  1:3812374/148‑1 (MQ=255)
                                                                                                     cccTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGcgacga                                          >  1:3180743/1‑148 (MQ=255)
                                                                                                     cccTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGcgacga                                          <  1:3373650/148‑1 (MQ=255)
                                                                                                       cTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATa                                        <  2:1611804/148‑1 (MQ=255)
                                                                                                        tGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATaa                                       <  1:1235348/148‑1 (MQ=255)
                                                                                                        tGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATaa                                       <  2:295604/148‑1 (MQ=255)
                                                                                                         gCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATaaa                                      <  2:2043651/148‑1 (MQ=255)
                                                                                                         gCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATaaa                                      <  1:661890/148‑1 (MQ=255)
                                                                                                          cGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAg                                     <  2:3432298/148‑1 (MQ=255)
                                                                                                           gTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGt                                    <  2:608949/148‑1 (MQ=255)
                                                                                                           gTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGt                                    <  2:2788099/148‑1 (MQ=255)
                                                                                                             gCTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCg                                  >  2:2367441/1‑148 (MQ=255)
                                                                                                              cTATCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCgg                                 <  1:3073408/148‑1 (MQ=255)
                                                                                                                aTCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGcc                               >  1:1448825/1‑148 (MQ=255)
                                                                                                                 tCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGccc                              >  2:1915973/1‑148 (MQ=255)
                                                                                                                 tCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGccc                              >  2:3646309/1‑148 (MQ=255)
                                                                                                                 tCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGccc                              >  2:1328504/1‑148 (MQ=255)
                                                                                                                 tCGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGccc                              >  2:2314578/1‑148 (MQ=255)
                                                                                                                  cGGCCACAGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCg                             <  1:950896/148‑1 (MQ=255)
                                                                                                                        caGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCggg                       >  1:2191795/1‑148 (MQ=255)
                                                                                                                        caGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCggg                       >  2:3051401/1‑148 (MQ=255)
                                                                                                                         aGTATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCgggg                      >  1:2485636/1‑148 (MQ=255)
                                                                                                                           tATGAGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCg                    <  1:512263/148‑1 (MQ=255)
                                                                                                                               aGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAAt                >  1:1365212/1‑148 (MQ=255)
                                                                                                                               aGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAAt                >  2:1830775/1‑148 (MQ=255)
                                                                                                                               aGCGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAAt                >  1:821778/1‑148 (MQ=255)
                                                                                                                                 cGAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCg              >  2:2912353/1‑148 (MQ=255)
                                                                                                                                  gAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAACTTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGa             <  2:3235773/148‑1 (MQ=255)
                                                                                                                                  gAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGa             <  1:3464340/148‑1 (MQ=255)
                                                                                                                                  gAAGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGCTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGa             <  1:3468288/148‑1 (MQ=255)
                                                                                                                                   aaGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCTAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGAt            <  2:4675/148‑1 (MQ=255)
                                                                                                                                   aaGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGAt            >  2:2397267/1‑148 (MQ=255)
                                                                                                                                   aaGAGATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGAt            >  2:1190399/1‑148 (MQ=255)
                                                                                                                                    agagATCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGAtc           >  1:3532055/1‑148 (MQ=255)
                                                                                                                                     gagaTCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGAtct          >  2:2198423/1‑148 (MQ=255)
                                                                                                                                     gagaTCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGAtct          <  1:1702099/148‑1 (MQ=255)
                                                                                                                                     gagaTCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGAtct          >  2:271243/1‑148 (MQ=255)
                                                                                                                                     gagaTCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGAtct          <  1:3597499/148‑1 (MQ=255)
                                                                                                                                      agaTCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGAtctc         >  2:1813296/1‑148 (MQ=255)
                                                                                                                                       gaTCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCg        >  2:2283703/1‑148 (MQ=255)
                                                                                                                                        aTCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCgg       >  1:1601602/1‑148 (MQ=255)
                                                                                                                                         tCATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCGGa      >  2:963423/1‑148 (MQ=255)
                                                                                                                                          cATTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCGGaa     <  2:834809/148‑1 (MQ=255)
                                                                                                                                           aTTTATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCGGaaa    <  1:734821/148‑1 (MQ=255)
                                                                                                                                            tttATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCGGAAAt   >  2:3755665/1‑148 (MQ=255)
                                                                                                                                            tttATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCGGAAAt   <  1:1647184/148‑1 (MQ=255)
                                                                                                                                            tttATTACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCGGAAAt   >  2:1281105/1‑148 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
CACGCGTACGGGTGAAATCCGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATGACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCGGAAATC  >  CP009273/3017140‑3017428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: