| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,022,562 | C→T | 100% | G577R (GGA→AGA) | ygfT ← | putative oxidoreductase, Fe‑S subunit/nucleotide‑binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,022,562 | 0 | C | T | 98.4% | 575.3 / ‑1.4 | 175 | G577R (GGA→AGA) | ygfT | putative oxidoreductase, Fe‑S subunit/nucleotide‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/3); new base T (97/75); total (97/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.66e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 176 total aligned reads displayed.
TGCCTTCCTGCGGCCATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCCGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTACGAAT > CP009273/3022417‑3022706 | tgcctTCCTGCGGCCATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGc > 1:436586/1‑148 (MQ=255)tgcctTCCTGCGGCCATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGc < 1:2078302/148‑1 (MQ=255) tGCGGCCATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGc > 2:148235/1‑148 (MQ=255) cGGCCATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCaa < 2:2700691/148‑1 (MQ=255) cATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCAc > 1:1692201/1‑148 (MQ=255) aTTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACg > 1:1828650/1‑148 (MQ=255) ttGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTCAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACgg > 2:3044480/1‑148 (MQ=255) ttGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACgg > 1:3356864/1‑148 (MQ=255) ttGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACgg > 2:3129808/1‑148 (MQ=255) tGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACggc > 1:1487146/1‑148 (MQ=255) gCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACggca < 1:3450560/148‑1 (MQ=255) cAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGcc > 2:2096991/1‑148 (MQ=255) cAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGcc < 1:1811060/148‑1 (MQ=255) cAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCCGCTGCCCTGCAACCACGGCATGGCATGCGcc < 1:1778981/148‑1 (MQ=255) aGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCt < 2:3012117/148‑1 (MQ=255) aGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCt > 1:2274472/1‑148 (MQ=255) aGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCt > 1:2274476/1‑148 (MQ=255) aTCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTgg > 1:1857356/1‑148 (MQ=255) aTCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTgg > 1:3281353/1‑148 (MQ=255) aTCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTgg > 1:606550/1‑148 (MQ=255) tCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGa > 2:2150595/1‑148 (MQ=255) cATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCaaa > 1:3566517/1‑148 (MQ=255) cATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCaaa > 1:3074322/1‑148 (MQ=255) aTGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAg > 2:816881/1‑148 (MQ=255) tGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAACgg > 2:1977042/1‑148 (MQ=255) tGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAgg > 1:3176776/1‑148 (MQ=255) aaCGGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGcc < 2:3640122/148‑1 (MQ=255) tGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATa < 2:3458120/148‑1 (MQ=255) tGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATa < 1:1401380/148‑1 (MQ=255) gCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATaa > 2:925774/1‑148 (MQ=255) cATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAAt > 2:219926/1‑148 (MQ=255) cATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAAt > 2:355879/1‑148 (MQ=255) tCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCa > 1:2607011/1‑148 (MQ=255) tCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCa > 1:2172259/1‑148 (MQ=255) caccacCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAg > 2:1936427/1‑148 (MQ=255) caccacCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAg > 2:1936757/1‑148 (MQ=255) accaccAGCAAAGACTTTTTTCAGATGCGTCTTGGTTGGTAAATACCCGACGTCTCCGGTTTGAATCAGGACCCATTTATCGAGTTTAATTCCGCTGCCCTGCAACCACGGCATTGCATGCGCCTGGAAAACAAAGGCCATAATCAGa < 2:768679/148‑1 (MQ=255) ccaccaGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGaa < 1:872141/148‑1 (MQ=255) ccaccaGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGaa < 1:2009736/148‑1 (MQ=255) accaGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACa < 1:3787108/148‑1 (MQ=255) accaGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACa < 1:1144769/148‑1 (MQ=255) ccaGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCCGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACAt < 1:2752404/148‑1 (MQ=255) gaGCATAGACTTTTTTCAGATGCGTCTGGTTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTTCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATc < 2:2033747/147‑1 (MQ=255) caGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATc < 2:2032180/148‑1 (MQ=255) cAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATcggc > 2:3064789/1‑148 (MQ=255) aaaGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATcggcg < 1:3314163/148‑1 (MQ=255) aaGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATcggcgg > 2:2287271/1‑148 (MQ=255) aaGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATcggcgg > 1:2623551/1‑148 (MQ=255) aaGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGAATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATcggcgg > 1:384552/1‑148 (MQ=255) aGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCggg > 2:2985649/1‑148 (MQ=255) gACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAACGGCCATAATCAGAACATCGGCGGGc > 1:2009848/1‑148 (MQ=255) gACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGc > 2:3503222/1‑148 (MQ=255) gACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGc > 1:1481126/1‑148 (MQ=255) ttttttCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAAt > 1:2874096/1‑148 (MQ=255) ttttttCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAAt > 1:2871097/1‑148 (MQ=255) ttttttCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAAt > 2:1167052/1‑148 (MQ=255) tttttCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAAtt > 1:1061265/1‑148 (MQ=255) tttttCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAAtt > 1:3101645/1‑148 (MQ=255) tttCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCa > 2:2936233/1‑148 (MQ=255) aGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAAct < 1:2844436/148‑1 (MQ=255) aGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAAct < 1:3609499/148‑1 (MQ=255) gATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAActc < 2:2525602/148‑1 (MQ=255) gATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAActc < 1:3693760/148‑1 (MQ=255) gATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAActc < 1:3693231/148‑1 (MQ=255) aTGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGACACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAActct > 2:2854267/1‑148 (MQ=255) aTGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAActct > 1:183094/1‑148 (MQ=255) aTGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAActct > 1:1184673/1‑148 (MQ=255) gCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGa < 1:3024616/148‑1 (MQ=255) gCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGa > 1:1645765/1‑148 (MQ=255) tCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAAcc < 2:3356864/148‑1 (MQ=255) cTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAAccc > 1:1677517/1‑148 (MQ=255) tGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCg < 2:1376193/148‑1 (MQ=255) tGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCg < 2:1376334/148‑1 (MQ=255) gggTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGc < 2:277045/148‑1 (MQ=255) gtaAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCgg > 2:956684/1‑148 (MQ=255) taAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCgga > 2:88500/1‑148 (MQ=255) taAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCgga < 1:3723573/148‑1 (MQ=255) taAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCgga > 2:3591930/1‑148 (MQ=255) aTACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggacga < 2:1228147/148‑1 (MQ=255) aCCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggacgagg < 1:2405339/148‑1 (MQ=255) aCCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggacgagg < 1:2595024/148‑1 (MQ=255) cccGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGTGCAATTCAAACTCTGAACCCGCTACCggacgagga < 2:537968/148‑1 (MQ=255) cccGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggacgagga < 1:3647053/148‑1 (MQ=255) gTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAAGTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACgg < 1:326515/148‑1 (MQ=255) cGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGAcc > 1:1966855/1‑148 (MQ=255) tttGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTCCCGGACGAGGACGACGGCGACCATc > 2:364268/1‑148 (MQ=255) tttGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATc > 2:2944300/1‑148 (MQ=255) tttGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATc < 2:436586/148‑1 (MQ=255) ttGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATcc > 2:2905144/1‑148 (MQ=255) aTCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGcc < 1:2960955/148‑1 (MQ=255) gCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTGCCGGACGAGGACGACGGCGACCATCCGGCCCCGGc > 1:1624175/1‑148 (MQ=255) gCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGc > 1:760389/1‑148 (MQ=255) gCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGc > 1:2309200/1‑148 (MQ=255) ccccATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCt < 1:97349/148‑1 (MQ=255) ccccATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCt > 2:187311/1‑148 (MQ=255) ttATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCa > 1:490825/1‑148 (MQ=255) cGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGc > 2:1705969/1‑148 (MQ=255) tttAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTa > 2:246324/1‑148 (MQ=255) tttAATTCTGCTGCCCTGCAACCACGGCATGGCAAGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCAACCGGCCCCGGCTCACCCAAGGCGGtc > 2:2537013/1‑147 (MQ=255) ttCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTACGAAt < 1:3503222/148‑1 (MQ=255) | TGCCTTCCTGCGGCCATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCCGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTACGAAT > CP009273/3022417‑3022706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |