| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,135,129 | T→A | 5.2% | K407I (AAA→ATA) | hybC ← | hydrogenase 2, large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,135,129 | 0 | T | A | 5.2% | 777.3 / 24.0 | 247 | K407I (AAA→ATA) | hybC | hydrogenase 2, large subunit |
| Reads supporting (aligned to +/- strand): ref base T (138/96); new base A (10/3); total (148/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 251 total aligned reads displayed.
TGTGATCGCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCCGTCGT > CP009273/3134983‑3135276 | tgtgATCGCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGttt < 2:179699/148‑1 (MQ=255) tgATCGCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCt > 1:1882839/1‑148 (MQ=255) gATCGCCTGTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTg < 2:3530844/148‑1 (MQ=255) tCGCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGAt > 2:1533450/1‑148 (MQ=255) cGCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATa > 2:272398/1‑148 (MQ=255) gCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATaa < 2:2154288/148‑1 (MQ=255) gCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCa < 1:1514385/148‑1 (MQ=255) ccGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCaa < 2:758178/148‑1 (MQ=255) atTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGAtt > 2:2289780/1‑148 (MQ=255) ttGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGAttt < 2:383610/148‑1 (MQ=255) ggTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATttca < 2:2765349/148‑1 (MQ=255) gTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATttcat > 1:3174704/1‑148 (MQ=255) gATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATttcattc < 1:3141316/148‑1 (MQ=255) gATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATttcattc < 1:1388652/148‑1 (MQ=255) aTCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATttcattca > 1:3276159/1‑148 (MQ=255) tCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAg < 1:1002170/148‑1 (MQ=255) aGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGtt > 1:350054/1‑148 (MQ=255) tGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTg < 2:1015122/148‑1 (MQ=255) tGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTg < 2:1276087/148‑1 (MQ=255) cTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCt > 1:677711/1‑148 (MQ=255) cTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCt > 2:2897277/1‑148 (MQ=255) gTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTgg > 1:1763099/1‑148 (MQ=255) agtGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGt < 1:1481307/146‑1 (MQ=255) ttGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTa > 1:3005270/1‑148 (MQ=255) tGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAg > 2:317330/1‑148 (MQ=255) tGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAg > 1:2798717/1‑148 (MQ=255) tGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAg < 1:2016494/148‑1 (MQ=255) ggTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGa < 1:1987645/148‑1 (MQ=255) ttttGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGAtt > 2:1235851/1‑148 (MQ=255) tttGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTc > 2:1870380/1‑148 (MQ=255) ttGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCTACGATTTCATTCAGTTTGTTCTGGGTAGATTcg < 1:2444549/148‑1 (MQ=255) ttGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTcg < 1:1703838/148‑1 (MQ=255) gCAGGAGATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTcgcg < 2:2757235/148‑1 (MQ=255) gATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCt > 2:1973353/1‑148 (MQ=255) atatCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGGGACCTg > 2:227939/1‑148 (MQ=255) atCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGAGTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTgcc > 2:3279465/1‑148 (MQ=255) tCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTgccg > 1:1822510/1‑148 (MQ=255) tGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCa > 1:2804701/1‑148 (MQ=255) cAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGt > 2:1106890/1‑148 (MQ=255) cAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGt < 1:573777/148‑1 (MQ=255) ttCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTc > 2:2206817/1‑148 (MQ=255) tCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCa > 1:1617139/1‑148 (MQ=255) tCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCa > 1:1783425/1‑148 (MQ=255) tCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCa > 1:2429139/1‑148 (MQ=255) gcagTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGc < 1:2727152/148‑1 (MQ=255) cagTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCa < 2:1882839/148‑1 (MQ=255) cagTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCa > 1:2843038/1‑148 (MQ=255) gTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCata > 2:1337610/1‑148 (MQ=255) tGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCatat > 2:3386997/1‑148 (MQ=255) tGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTGTCACCAGCatat > 2:2013008/1‑148 (MQ=255) tGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCatat > 1:987836/1‑148 (MQ=255) aaCGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTa > 2:2448185/1‑148 (MQ=255) ggTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCTCTTCCAGCGTGTTTCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGCTTCGCGACCTGCCGCCAGTTTCACCAGCTTATTAGcc < 2:2580138/148‑1 (MQ=255) ggTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGcc < 2:3625767/148‑1 (MQ=255) gTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCa < 1:2083081/148‑1 (MQ=255) aCCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGc > 2:218687/1‑148 (MQ=255) aCCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGc < 2:3319823/148‑1 (MQ=255) aataatACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGcccc > 1:274116/1‑148 (MQ=255) ataataCGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGAAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGACCGTGGCCCCa > 1:332387/1‑148 (MQ=255) ataCGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACtt < 2:1421251/148‑1 (MQ=255) ataCGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACtt < 1:1221145/148‑1 (MQ=255) aCGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCt < 2:919690/148‑1 (MQ=255) aCGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCt < 2:2524295/148‑1 (MQ=255) cGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTa < 2:1283228/148‑1 (MQ=255) cGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTa < 2:444920/148‑1 (MQ=255) gCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTAcc > 1:1679847/1‑148 (MQ=255) cccAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCg > 2:3506721/1‑148 (MQ=255) cAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGtt < 1:2278607/148‑1 (MQ=255) cAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGtt > 2:2327779/1‑148 (MQ=255) aGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGttt > 1:3627579/1‑148 (MQ=255) gAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGt > 1:695844/1‑148 (MQ=255) cAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGaaa < 2:688786/148‑1 (MQ=255) cAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGaaa < 1:317330/148‑1 (MQ=255) aGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAg > 2:3102799/1‑148 (MQ=255) cTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTc > 2:1189401/1‑148 (MQ=255) cTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATACGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTc > 1:786681/1‑148 (MQ=255) gCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTg < 1:1123842/148‑1 (MQ=255) gCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTg < 2:15475/148‑1 (MQ=255) cACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGAt > 1:2390184/1‑148 (MQ=255) cACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGAt > 1:3546036/1‑148 (MQ=255) aCTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGAtt > 2:1302977/1‑148 (MQ=255) aGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCAccc > 1:2686829/1‑148 (MQ=255) gCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTcacaca > 2:3397697/1‑148 (MQ=255) gCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCa > 2:3186779/1‑148 (MQ=255) cGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAg > 2:2440369/1‑148 (MQ=255) tgtTGCCAGTCAGTATCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGa > 1:769381/1‑148 (MQ=255) ttGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAat < 2:3255085/148‑1 (MQ=255) tGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAata > 2:2655366/1‑148 (MQ=255) gCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAatat < 1:2897302/148‑1 (MQ=255) gCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAatat < 1:451070/148‑1 (MQ=255) cagtcagtTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATAttt < 2:274116/148‑1 (MQ=255) agtcagtTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTc < 1:8117/148‑1 (MQ=255) gtcagtTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTcc > 2:2945664/1‑148 (MQ=255) tcagtTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTccc > 1:557458/1‑148 (MQ=255) cagtTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCcg > 1:1206063/1‑148 (MQ=255) gtTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCcgtc > 1:3816955/1‑148 (MQ=255) gtTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCcgtc > 1:860027/1‑148 (MQ=255) gtTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCcgtc > 1:2773979/1‑148 (MQ=255) tttCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCcgtcg > 2:3458558/1‑148 (MQ=255) tttCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCcgtcg < 2:2529427/148‑1 (MQ=255) | TGTGATCGCCTTTGCCGATATTGGTGATCAGTGCACTGTATTGGTTTTGCAGGATATCCTGCAATTCACAGCAGTGAACGGTACGACCAATAATACGGCCCAGCGTGGAGTGCAGCTGTGCCACTTCCAGCGTGTTGCCAGTCAGTTTCTGATAAATCGCAACGATTTCATTCAGTTTGTTCTGGGTAGATTCGCGACCTGCCGCCAGTTTCACCAGCATATTAGCCAGTGGCCCCACTTCTACCGTTTTGCCGTAGAAAGTCGGTGATTTCACCCAGGAATATTTCCCGTCGT > CP009273/3134983‑3135276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |