| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,466,043 | C→A | 12.7% | A277A (GCG→GCT) | fusA ← | protein chain elongation factor EF‑G, GTP‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,466,043 | 0 | C | A | 12.7% | 772.9 / 58.5 | 235 | A277A (GCG→GCT) | fusA | protein chain elongation factor EF‑G, GTP‑binding |
| Reads supporting (aligned to +/- strand): ref base C (88/117); new base A (23/7); total (111/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.90e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Only 100 of 235 total aligned reads displayed.
TAGCGATTTTGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGC > CP009273/3465898‑3466189 | aGCGATTTTGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGcc < 2:1473958/148‑1 (MQ=255) aGCGATTTTGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGcc < 2:2985718/148‑1 (MQ=255) cGATTTTGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTg > 1:1657474/1‑148 (MQ=255) gAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCt < 1:2672888/148‑1 (MQ=255) ccAGTGCAGAGAACGGCTCGTCATCACTTGCATGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGtt < 1:2923071/148‑1 (MQ=255) tGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTg > 1:3185704/1‑148 (MQ=255) tGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTg > 2:2859139/1‑148 (MQ=255) cAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGaa < 1:3358535/148‑1 (MQ=255) gagaACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACg < 2:1913012/148‑1 (MQ=255) gagaACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACg > 1:2240277/1‑148 (MQ=255) agaACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGc > 1:3488814/1‑148 (MQ=255) agaACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGc > 2:277466/1‑148 (MQ=255) gaACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCa < 2:167649/148‑1 (MQ=255) aaCGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAg < 1:1486237/148‑1 (MQ=255) cGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGaa < 2:3667328/148‑1 (MQ=255) cGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGaa < 2:3790443/148‑1 (MQ=255) cGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACcaca < 1:2039855/148‑1 (MQ=255) cGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACcaca > 2:3245354/1‑148 (MQ=255) cGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACcaca < 1:1621645/148‑1 (MQ=255) catcaCTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGt < 1:5210/148‑1 (MQ=255) catcaCTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGt < 1:6333/148‑1 (MQ=255) caCTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTAc > 1:3439434/1‑148 (MQ=255) caCTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTAc < 2:2755623/148‑1 (MQ=255) caCTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTAc > 2:2324745/1‑148 (MQ=255) caCTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTAc > 1:1372535/1‑148 (MQ=255) aCTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTAcc > 2:1616289/1‑148 (MQ=255) cTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCa > 1:1436176/1‑148 (MQ=255) ttGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAg < 2:1408442/148‑1 (MQ=255) gCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAAGTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGga < 2:2192081/148‑1 (MQ=255) gTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGgatg < 2:1708590/148‑1 (MQ=255) tGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGgatga > 2:2831474/1‑148 (MQ=255) aCGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGAtt < 2:1070576/148‑1 (MQ=255) cGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGAttt < 1:1875470/148‑1 (MQ=255) ttCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCg > 2:3078011/1‑148 (MQ=255) ttCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGAGGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCg < 2:2677242/148‑1 (MQ=255) tCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCgt > 2:2893022/1‑148 (MQ=255) gCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCgttgt < 2:1317650/148‑1 (MQ=255) ccGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCgttgtt > 2:751201/1‑148 (MQ=255) ccGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCgttgtt > 2:2262908/1‑148 (MQ=255) ggAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCa < 1:3693072/148‑1 (MQ=255) gAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAg > 2:1541435/1‑148 (MQ=255) gAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAg > 2:3754184/1‑148 (MQ=255) aGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGa < 1:737731/148‑1 (MQ=255) aGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGa < 1:2544258/148‑1 (MQ=255) aGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGa > 2:1332160/1‑148 (MQ=255) aGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGa < 1:107548/148‑1 (MQ=255) aGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGa > 1:2623822/1‑148 (MQ=255) gtgtCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGaa < 2:322719/148‑1 (MQ=255) tttACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACgcgc > 2:2218877/1‑148 (MQ=255) tttACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACgcgc < 2:2101666/148‑1 (MQ=255) aCCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATTATTTCGTTGTTCAGAACGCGCTGa < 1:2435447/148‑1 (MQ=255) tcgtcCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCa < 1:874725/148‑1 (MQ=255) tcgtcCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCa > 1:1649401/1‑148 (MQ=255) cAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCTTTGTTCAGAACGCGCTGACGCagagaa > 1:1552112/1‑146 (MQ=255) cAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCa < 2:1020950/148‑1 (MQ=255) ggATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCAcc < 2:143639/148‑1 (MQ=255) ggATACCGTTCATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCAcc > 2:3000151/1‑148 (MQ=255) gATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCt > 1:1160915/1‑148 (MQ=255) tACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCttt < 2:1053424/148‑1 (MQ=255) tACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCttt > 1:606618/1‑148 (MQ=255) aCCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTg < 1:1398525/148‑1 (MQ=255) aCCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTg < 1:2556266/148‑1 (MQ=255) aCCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTg < 1:714206/148‑1 (MQ=255) aCCGTTGATCGCAGGTACGTCAACCGGGGATGGAAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTg < 1:3284540/148‑1 (MQ=255) ttGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGAttt > 1:1543110/1‑148 (MQ=255) ttGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGAttt < 1:1198683/148‑1 (MQ=255) tGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTc > 2:3324855/1‑148 (MQ=255) aTCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGTATGATTTCGTTGTTCAGAACGAGATGACGCAGAGCACCTTTGATTTCTg > 2:3475961/1‑148 (MQ=255) tCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGc > 2:1635472/1‑148 (MQ=255) ggTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTtcag > 2:849977/1‑148 (MQ=255) ggTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTtcag > 2:3582718/1‑148 (MQ=255) gTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTcagtcagt < 2:3488814/148‑1 (MQ=255) tCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGtt < 1:889669/148‑1 (MQ=255) tCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGtt < 1:2173103/148‑1 (MQ=255) cAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGttc > 1:2819426/1‑148 (MQ=255) ccGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGttcttc < 1:915908/148‑1 (MQ=255) ccGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGttcttc < 2:52760/148‑1 (MQ=255) ggggATGGCAGTTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTcac < 2:1016640/148‑1 (MQ=255) ggggATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTcac < 2:2928362/148‑1 (MQ=255) tGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGACCACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCAccc < 2:1974591/148‑1 (MQ=255) aGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGt < 1:3639417/148‑1 (MQ=255) aaTCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTAttt > 2:1118203/1‑148 (MQ=255) aaTCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTAttt > 2:548204/1‑148 (MQ=255) aaTCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTAttt < 2:3439241/148‑1 (MQ=255) aaTCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGATTCAGTCAGTTCTTCACCACCCAGGTAttt > 2:1569574/1‑148 (MQ=255) aTCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTAtttt > 2:1141172/1‑148 (MQ=255) tCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTAttttt < 2:134780/148‑1 (MQ=255) tCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTAttttt > 2:1203020/1‑148 (MQ=255) tCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTAttttt > 1:2337011/1‑148 (MQ=255) ttACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCAt > 2:2147317/1‑148 (MQ=255) ttACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCAt > 2:2504131/1‑148 (MQ=255) cGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGc < 1:395727/148‑1 (MQ=255) gCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGct < 2:2498186/148‑1 (MQ=255) gCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGct < 1:2903523/148‑1 (MQ=255) aTCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGctct < 2:2431625/148‑1 (MQ=255) ccAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTc > 1:3151900/1‑148 (MQ=255) aGCATCGCCTGAACACCTTTGTTCTTGATCGCAGAACCAGAGGTTACCAGGATGTTTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCTCCACCCAGGTATTTTTCCATCAGCTCTTCAg < 1:2558401/148‑1 (MQ=255) gCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGa < 2:416676/148‑1 (MQ=255) cATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGaa > 2:1748292/1‑148 (MQ=255) tCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGc < 2:1865347/148‑1 (MQ=255) | TAGCGATTTTGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGC > CP009273/3465898‑3466189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |