| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,509,102 | G→T | 100% | S57R (AGC→AGA) | dam ← | DNA adenine methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,509,102 | 0 | G | T | 99.2% | 466.9 / ‑4.1 | 147 | S57R (AGC→AGA) | dam | DNA adenine methyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base T (84/61); total (85/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 148 total aligned reads displayed.
GGAACGGATCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCG‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGCCCCCTGCCCAC > CP009273/3508957‑3509246 | ggaactgaTCCTGGCTTTTTTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTct‑ct < 2:632789/148‑1 (MQ=255) gaacggaTCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTa > 2:2497465/1‑148 (MQ=255) aacggaTCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCTGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTAt > 1:2593292/1‑148 (MQ=255) aacggaTCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTAt > 1:172570/1‑148 (MQ=255) aacggaTCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTAt > 2:3576884/1‑148 (MQ=255) aacggaTCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTAt > 1:2144417/1‑148 (MQ=255) aacggaTCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTAt > 1:2056149/1‑148 (MQ=255) aacggaTCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTAt < 1:1500237/148‑1 (MQ=255) gaTCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGat < 1:2698519/148‑1 (MQ=255) aTCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCCGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGata > 1:2087094/1‑148 (MQ=255) tCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGatat < 2:2274245/148‑1 (MQ=255) tCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGatat > 2:3257306/1‑148 (MQ=255) tCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGatat < 2:2274041/148‑1 (MQ=255) cTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCaa > 2:3182790/1‑148 (MQ=255) tttGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAgg < 2:894545/148‑1 (MQ=255) ttgttgAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGa > 2:2188008/1‑148 (MQ=255) tgttgAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGat < 2:899599/148‑1 (MQ=255) tgttgAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGat < 2:2630271/148‑1 (MQ=255) gAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATaa < 1:2134521/148‑1 (MQ=255) aCTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACg > 1:650725/1‑148 (MQ=255) tctTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACgag < 2:307237/148‑1 (MQ=255) tctTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACgag > 1:453955/1‑148 (MQ=255) tCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGaaa < 2:1602841/148‑1 (MQ=255) gcgGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAg < 1:3747795/148‑1 (MQ=255) cgGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGt < 1:3059899/148‑1 (MQ=255) cgGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGt < 1:2905834/148‑1 (MQ=255) gAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCg > 2:3307655/1‑148 (MQ=255) gAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCg > 1:3568240/1‑148 (MQ=255) aaCTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCgg > 2:1962429/1‑148 (MQ=255) aaCTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCgg > 2:1223257/1‑148 (MQ=255) aaCTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCgg < 2:2680608/148‑1 (MQ=255) aaCTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCgg < 2:759113/148‑1 (MQ=255) aaCTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGGTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCgg > 1:1490211/1‑148 (MQ=255) gATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGtt > 1:2762372/1‑148 (MQ=255) atatTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCTGACTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTg < 1:269136/148‑1 (MQ=255) aaCCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAac < 2:848524/148‑1 (MQ=255) aaCCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAac < 2:1356555/148‑1 (MQ=255) cgcAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGAccc > 1:527132/1‑148 (MQ=255) cgcAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGAccc > 1:1129912/1‑148 (MQ=255) aTTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCa > 1:1307528/1‑148 (MQ=255) ttCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGCCTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACa > 1:356711/1‑148 (MQ=255) ggAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAg > 1:1893650/1‑148 (MQ=255) ggAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAg > 2:1501101/1‑148 (MQ=255) gAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAgg > 2:2321523/1‑148 (MQ=255) caaacaGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTc > 1:111516/1‑148 (MQ=255) caaacaGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTc > 2:454434/1‑148 (MQ=255) caaacaGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTc > 2:1649289/1‑148 (MQ=255) aacaGCTCGCGTGCGGCCTGTACGTACACATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCaa < 2:3739619/148‑1 (MQ=255) acaGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAAc > 2:1117441/1‑148 (MQ=255) cgcgTGCGGCATTTACGTACTCATCAGTACGCATATACACAATGTTATAGAGACTGATCAGGTAT‑CTTTTTATATCGCCAAGGAAATAACGAGAAAAGTCGGTTTTGATAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACa < 1:1595580/148‑1 (MQ=255) gcgTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACAt < 2:3447051/148‑1 (MQ=255) gggCCTTTACTTACTAATCATTACTAATGTTAAAATTTTTATAGACACTGATCTGGTAT‑ATATTTATATCGGAACGGATATAACTACAAAAGTCGGTGTTGATAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGcc < 2:3520168/147‑1 (MQ=255) cGGCCTGTACGTACTCATCAGTACGCATCTCCACAATGTTATAGAGACTGATCAGGGCT‑CTATTGATATCGGCAAGGATATAACGAGAAATGTCGGTGTTGAGAAACACCGACCCGGCACCTACAACAGGCTCAACCAGACATTCGcc < 2:2656404/148‑1 (MQ=255) ggCCTTTACGTACTCATCAGTACGCATCTACACAATGTTATAGAGACTTATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTTAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGccc < 2:1810154/148‑1 (MQ=255) ggCCTGTACGTACTCAACAGTACGCATCTTCACAATGTTATAGAGACTGATCCGGTCT‑CTATTGATATCGGCACGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGccc < 2:3700511/148‑1 (MQ=255) gCCTGTACGTAATATTCAGTACGCATCTTCACAATGTTATAGAGACTTATCTGGTCT‑CTTTTGATATCGGCATGTATATAACGATAAAAGTCGGTTTTGAGAAACCCCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCt < 2:650725/148‑1 (MQ=255) cTGTACGTACTCATCTGTACGAATCTTCAAAATGTTTTAGATCCTGATCAGGTCT‑ATTTTTATATCGGCAAGGATATACCGAGAAAAGTGGGTGTTGAGAAAAACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTg < 2:974611/148‑1 (MQ=255) cTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTTTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTg < 2:1864043/148‑1 (MQ=255) cTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTg < 2:1864083/148‑1 (MQ=255) tGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTgg > 1:1604376/1‑148 (MQ=255) gtacgtacTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTggg > 1:3519722/1‑148 (MQ=255) cgtacTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCaa < 2:1543003/148‑1 (MQ=255) tacTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAAt > 1:1016182/1‑148 (MQ=255) cTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGc > 2:224583/1‑148 (MQ=255) tcatcaGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTTTTGATATCGGCAAGGATATAACGACAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGcc < 2:1085742/148‑1 (MQ=255) atcaGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGt > 2:1327892/1‑148 (MQ=255) caGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGttt > 1:1356122/1‑148 (MQ=255) aGTACGAATCTACACATTGTTATAGAGACTGATCAGGTCT‑CTTTTTATATCGCCAAGTATATAACGACAAAAGTGGGTGTTGACAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTa < 1:2769645/148‑1 (MQ=255) gaccGCATCTTCACAATGTTATAGACACTGATCCGGTCT‑CTTTTGATATCGCCCAGTATATAACGATAAATGTCGGTGTTCACAAACCCCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTaa < 1:3290567/145‑1 (MQ=255) tACGCATCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAat > 1:936889/1‑148 (MQ=255) tACGAATCTTCACATTTTTATAGAGACTGTTCCGGTAT‑CTTTTTTTTTCGGAATGTATATAACTATAATAGTGGGTTTTGAGAACCCCCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAat < 1:2287375/148‑1 (MQ=255) aTCTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATatcat < 2:2450763/148‑1 (MQ=255) cTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACTAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATAtcatca > 2:1820937/1‑148 (MQ=255) cTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATAtcatca > 2:3711429/1‑148 (MQ=255) cTTCACAATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATAtcatca > 1:2989286/1‑148 (MQ=255) cacaATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGTATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGc < 2:2056149/148‑1 (MQ=255) acaATTTTATAGATACTGATCAGGTCT‑TTATTGATATCGGCATGTATATAACGATAAAAGTCGGTTTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCa < 1:2850109/148‑1 (MQ=255) acaATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCa > 2:1712847/1‑148 (MQ=255) caATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAg > 2:742650/1‑148 (MQ=255) caATGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAg > 1:2369764/1‑148 (MQ=255) ccggTTCTAGAGACTGAAC‑CGTCGTCGATTGATATGGGAAAGGATTTAAGGAGAAAACACCGTGTTGAGAAAGACCGACCCGGCACCTACCAATCGCTCAACGATAGATTCGCCATTGGGCAAATGCCTTTTAATATCATCAAGCAgg < 2:2030564/145‑1 (MQ=255) attGTTATTGTGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAgg < 2:1515707/146‑1 (MQ=255) aTGTTATAGCGACTGATCAGGTCT‑ATATTGATATCGGCATGTATATAACGACAAACGTCGGTTTTGACAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAggg < 1:2235622/148‑1 (MQ=255) aTGTTATAGAGACTGATCTGGTCT‑CTTTTTATATCGGCAAGCATATAACGAGAAAAGTCGGTGTTGACAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAggg < 1:2235863/148‑1 (MQ=255) aTGTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAggg > 1:396379/1‑148 (MQ=255) gTTATAGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGTATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGa < 2:399947/148‑1 (MQ=255) tataGAGACTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATa > 1:2562887/1‑148 (MQ=255) gagaCGTATCTGGTCT‑CTATGGATAGGGCCAAGGAAAAAACTACAATAGTGGGTGTTGAGAAAACCCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTg < 1:2752224/148‑1 (MQ=255) agaCTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGc > 2:1964730/1‑148 (MQ=255) agaCTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTGTAATATCATCAAGCAGGGGATCCTTGc > 2:2918660/1‑148 (MQ=255) aCTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGccc > 1:2442799/1‑148 (MQ=255) aCTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGccc > 2:1571461/1‑148 (MQ=255) cTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGcccc < 2:3686003/148‑1 (MQ=255) cTGATCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTGGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGcccc > 2:3102568/1‑148 (MQ=255) aTCAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGCCCCCTg > 2:252080/1‑148 (MQ=255) cAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGCCCCCTGcc > 1:3786391/1‑148 (MQ=255) cAGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGCCCCCTGcc > 2:343149/1‑148 (MQ=255) aGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGGCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGCCCCCTGccc > 2:1231477/1‑148 (MQ=255) aGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGCCCCCTGccc > 1:2500753/1‑148 (MQ=255) aGGTCT‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGCCCCCTGccc > 2:1229187/1‑148 (MQ=255) | GGAACGGATCCTGGCTTTTGTTGAACTCTTCGCGGAACTGATAGTAAACCTCGGCGCAATTTGTTTCGGGAACAAACAGCTCGCGTGCGGCCTGTACGTACTCATCAGTACGCATCTTCACAATGTTATAGAGACTGATCAGGTCG‑CTATTGATATCGGCAAGGATATAACGAGAAAAGTCGGTGTTGAGAAACACCGACCCGGCACCTACAAAAGGCTCAACCAGACATTCGCCCTTGGGCAAATGCCGTTTAATATCATCAAGCAGGGGATACTTGCCCCCTGCCCAC > CP009273/3508957‑3509246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |