| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,590,636 | G→T | 100% | Y95* (TAC→TAA) | livK ← | leucine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,590,636 | 0 | G | T | 99.6% | 891.9 / ‑4.4 | 269 | Y95* (TAC→TAA) | livK | leucine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (146/122); total (147/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 269 total aligned reads displayed.
CCAGCCCGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACGTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCG > CP009273/3590491‑3590780 | ccAGCCCGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTa < 2:2780821/148‑1 (MQ=255) gCCCGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTAttt > 2:1402089/1‑148 (MQ=255) cccGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTa > 2:1798099/1‑148 (MQ=255) cccGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTa > 2:342469/1‑148 (MQ=255) cccGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTa < 1:1605196/148‑1 (MQ=255) ccGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTaa < 2:958407/148‑1 (MQ=255) ccGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTaa < 2:494432/148‑1 (MQ=255) ccGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTaa < 1:1321590/148‑1 (MQ=255) ggCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATg < 1:2902576/148‑1 (MQ=255) gCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGc > 1:2654864/1‑148 (MQ=255) cGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCAt < 2:1496229/148‑1 (MQ=255) aaTGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACg < 2:853729/148‑1 (MQ=255) aaTGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACg > 1:892784/1‑148 (MQ=255) aaTGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACg > 1:3793468/1‑148 (MQ=255) aaTGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACg < 1:2114837/148‑1 (MQ=255) aaTGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACg > 1:3174174/1‑148 (MQ=255) gtgtTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGAtt < 1:773907/148‑1 (MQ=255) ttGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTttg < 2:741042/148‑1 (MQ=255) ttGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTttg < 1:939060/148‑1 (MQ=255) gATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTttgtt < 1:2418972/148‑1 (MQ=255) ttGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCa < 1:1458995/148‑1 (MQ=255) tGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCaa < 1:3697253/148‑1 (MQ=255) tGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCaa > 2:581769/1‑148 (MQ=255) ggTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACg > 2:3266962/1‑148 (MQ=255) tCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGc > 2:1279928/1‑148 (MQ=255) tCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGc < 2:191206/148‑1 (MQ=255) gCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTg < 1:3211372/148‑1 (MQ=255) ggTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCgg > 1:1010663/1‑148 (MQ=255) gTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCAGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCggg > 2:343689/1‑148 (MQ=255) gTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGc < 1:1671623/148‑1 (MQ=255) gTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGc < 2:232084/148‑1 (MQ=255) tCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCa > 2:347398/1‑148 (MQ=255) tCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGcg > 2:3119065/1‑148 (MQ=255) cccGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGcgt < 2:929780/148‑1 (MQ=255) cccGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGcgt > 1:1112853/1‑148 (MQ=255) cccGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGcgt > 2:2006164/1‑148 (MQ=255) cGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCa < 2:417002/148‑1 (MQ=255) gagaTCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCat < 2:3784115/148‑1 (MQ=255) agaTCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCata < 1:260131/148‑1 (MQ=255) gaTCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCatat > 2:2192109/1‑148 (MQ=255) atcatcAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATAtt > 1:508925/1‑148 (MQ=255) tcatcaGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTc < 2:1209016/148‑1 (MQ=255) tcatcaGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTc < 1:3580785/148‑1 (MQ=255) catcaGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTcc < 2:3099752/148‑1 (MQ=255) tcaGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCAc > 1:198826/1‑148 (MQ=255) caGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACg < 1:552136/148‑1 (MQ=255) caGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTGGTTTCGGGTCGCATGCGTCGTCATATTCCACg > 2:1310909/1‑148 (MQ=255) gAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGcc > 2:2703949/1‑148 (MQ=255) gAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGcc > 1:2249023/1‑148 (MQ=255) tACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAAc > 2:148901/1‑148 (MQ=255) aCCTTCGTCTTCATAGATATCTGACGCAGGCTGTTTAGAAGAAGAACACAGATGACCAATACCTTATTTAATGCCGTCATTAACGATTTTGTTGTCGACCGCAACGGCTTGTTTCTGGTCGCATGCGTCGTCATATTCCACGCCAAcc < 2:2468689/148‑1 (MQ=255) aCCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAAcc > 1:790085/1‑148 (MQ=255) ccTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCa > 2:1039625/1‑148 (MQ=255) cTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAg > 1:1642041/1‑148 (MQ=255) gTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTa < 1:1860698/148‑1 (MQ=255) cTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTAta > 1:2858556/1‑147 (MQ=255) cTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATc > 1:2773165/1‑148 (MQ=255) aGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCtt > 2:1047738/1‑148 (MQ=255) aGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCtt > 1:1891562/1‑148 (MQ=255) gATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTa < 1:2459840/148‑1 (MQ=255) atatCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTaa > 2:1692853/1‑148 (MQ=255) atatCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTaa > 2:3331942/1‑148 (MQ=255) atatCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTaa > 2:1329236/1‑148 (MQ=255) tatCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAAt < 2:1762114/148‑1 (MQ=255) atCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAAtt > 1:2915974/1‑148 (MQ=255) tCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATAGCCCTTAATTc < 1:129476/148‑1 (MQ=255) cTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTcc > 1:62380/1‑148 (MQ=255) cTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTcc > 1:3035343/1‑148 (MQ=255) aCGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTccccc < 1:342469/148‑1 (MQ=255) cGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCt < 1:2074958/148‑1 (MQ=255) cGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCt < 2:1239699/148‑1 (MQ=255) cGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCt < 1:886825/148‑1 (MQ=255) gCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGc > 2:928104/1‑148 (MQ=255) gCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATAGCCCTTAATTCCCCCTTTGGc > 2:1184479/1‑148 (MQ=255) ggTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTa < 2:2822422/148‑1 (MQ=255) ggTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTa < 1:373829/148‑1 (MQ=255) ttAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTAATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCATTTTATCGCCCTTAATTCCCCCTTTGGCATTaa < 2:2449657/147‑1 (MQ=255) gTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTaa < 2:758143/148‑1 (MQ=255) agaagaagaACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATg > 1:2107180/1‑148 (MQ=255) gaagaagaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGt < 2:2654864/148‑1 (MQ=255) gaagaagaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGt > 2:1122469/1‑148 (MQ=255) aagaagaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTc < 2:3669577/148‑1 (MQ=255) agaagaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCt > 2:753985/1‑148 (MQ=255) agaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTa < 1:699215/148‑1 (MQ=255) aaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAAt > 1:179644/1‑148 (MQ=255) acaGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGc < 1:347398/148‑1 (MQ=255) caGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATAGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGcc > 1:2614344/1‑148 (MQ=255) gATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTg < 1:2704879/148‑1 (MQ=255) gATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTg > 2:835828/1‑148 (MQ=255) cAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGAcgcgc > 1:2871458/1‑148 (MQ=255) cAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGAcgcgc > 2:2893504/1‑148 (MQ=255) cAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGAcgcgc > 1:464186/1‑148 (MQ=255) aaTAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGAcgcgcg > 1:1168578/1‑148 (MQ=255) tAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGcc > 1:2494847/1‑148 (MQ=255) tAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATAGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGcc > 1:717834/1‑148 (MQ=255) aaCTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCg > 2:3301074/1‑148 (MQ=255) aaCTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCg > 1:2276122/1‑148 (MQ=255) aaCTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCg > 1:2317010/1‑148 (MQ=255) aaCTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCg < 2:3226243/148‑1 (MQ=255) aaCTTATTTAATGCCGTCATTAACGATTTTGGTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCg < 2:3654365/148‑1 (MQ=255) | CCAGCCCGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACGTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCG > CP009273/3590491‑3590780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |