Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 108,648 Δ1 bp 100% coding (439/744 nt) zapD ← FtsZ stabilizer

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273108,6480G.100.0% 1296.1 / NA 237coding (439/744 nt)zapDFtsZ stabilizer
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (103/134);  total (103/134)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 250 total aligned reads displayed.

ACCGTTATCCTGATAAAAACCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCTGGGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCC  >  CP009273/108502‑108792
                                                                                                                                                  |                                                                                                                                                
   gTTATCCTGATAAAAACCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCTgggtag                                                                                                                                             >  1:567714/1‑146 (MQ=255)
   gTTATCCTGATAAAAACCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCTgggtag                                                                                                                                             >  1:787379/1‑146 (MQ=255)
     tATCCTGATAAAAACCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGAt                                                                                                                                          <  2:2730051/149‑1 (MQ=255)
       tCCTGATAAAAACCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGc                                                                                                                                        >  2:3874393/1‑149 (MQ=255)
       tCCTGATAAAAACCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGc                                                                                                                                        <  1:554539/149‑1 (MQ=255)
         cTGATAAAAACCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAg                                                                                                                                      >  1:427557/1‑149 (MQ=255)
            aTAAAAACCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCa                                                                                                                                   >  2:1921348/1‑149 (MQ=255)
            aTAAAAACAATTCAGGCTGGTTTGATTAAGGAAGGGGGCCGACTTGCGAATTAAATCCAGCACCAGGGTAAGTGCATGGGTGAGCGGGTTCAGGCTGGCAATCAAGGTTTCTACATGGATGTCGCGCTGCGCCT‑GGGTAGATGCAGCCa                                                                                                                                   >  2:1728284/1‑149 (MQ=255)
              aaaaaCCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCaaa                                                                                                                                 <  1:1309723/149‑1 (MQ=255)
              aaaaaCCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCaaa                                                                                                                                 >  2:2965628/1‑149 (MQ=255)
              aaaaaCCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCaaa                                                                                                                                 >  2:1145995/1‑149 (MQ=255)
              aaaaaCCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCaaa                                                                                                                                 >  2:1848088/1‑149 (MQ=255)
                aaaCCATTCAGGCGGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAAtg                                                                                                                               <  2:543034/149‑1 (MQ=255)
                   ccATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGc                                                                                                                            <  1:1287758/149‑1 (MQ=255)
                   ccATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGc                                                                                                                            >  2:1479556/1‑149 (MQ=255)
                     aTTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCaa                                                                                                                          >  2:2989186/1‑149 (MQ=255)
                     aTTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCaa                                                                                                                          <  2:2486827/149‑1 (MQ=255)
                      ttCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAAt                                                                                                                         <  1:2279199/149‑1 (MQ=255)
                       tCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATg                                                                                                                        >  1:2678333/1‑149 (MQ=255)
                        cAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGt                                                                                                                       <  2:1375466/149‑1 (MQ=255)
                        cAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGt                                                                                                                       <  2:1375442/149‑1 (MQ=255)
                          ggCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAg                                                                                                                     >  1:1513098/1‑149 (MQ=255)
                           gCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAgg                                                                                                                    <  2:2567102/149‑1 (MQ=255)
                           gCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAgg                                                                                                                    <  1:3768570/149‑1 (MQ=255)
                               gtttgtttACGGAAGGGGGCCGACTGGTGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTaaa                                                                                                                <  2:617481/149‑1 (MQ=255)
                               gtttgtttACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTaaa                                                                                                                >  2:4044385/1‑149 (MQ=255)
                                tttgtttACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAAt                                                                                                               <  2:418282/149‑1 (MQ=255)
                                 ttgtttACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATc                                                                                                              <  1:3726851/149‑1 (MQ=255)
                                      tACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGc                                                                                                         <  1:4031954/149‑1 (MQ=255)
                                      tACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGc                                                                                                         <  1:116098/149‑1 (MQ=255)
                                       aCGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCt                                                                                                        <  1:2810902/149‑1 (MQ=255)
                                         ggAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCCATGTAGGTAAATCAAAGCTGc                                                                                                      >  2:3282697/1‑149 (MQ=255)
                                         ggAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTAAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGc                                                                                                      <  1:3953207/149‑1 (MQ=255)
                                           aaGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCaa                                                                                                    <  1:298809/149‑1 (MQ=255)
                                            aGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAAc                                                                                                   <  2:1592282/149‑1 (MQ=255)
                                             gggggCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACa                                                                                                  <  2:767024/149‑1 (MQ=255)
                                               gggCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAgc                                                                                                <  1:2770352/149‑1 (MQ=255)
                                                 gCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAgccg                                                                                              >  1:484646/1‑149 (MQ=255)
                                                     aCTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTg                                                                                          <  1:1274691/149‑1 (MQ=255)
                                                      cTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTgg                                                                                         <  2:2797942/149‑1 (MQ=255)
                                                        ggCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGa                                                                                       <  1:3391841/149‑1 (MQ=255)
                                                           gAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGc                                                                                    <  1:2519943/149‑1 (MQ=255)
                                                           gAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGc                                                                                    >  2:733891/1‑149 (MQ=255)
                                                           gAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGc                                                                                    <  1:2519870/149‑1 (MQ=255)
                                                            aaTTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCt                                                                                   >  1:1357927/1‑149 (MQ=255)
                                                            aaTTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCt                                                                                   >  2:850356/1‑149 (MQ=255)
                                                                       gCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGAc                                                                        >  2:836487/1‑149 (MQ=255)
                                                                        cACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGGAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACg                                                                       >  1:674711/1‑149 (MQ=255)
                                                                           cATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCAc                                                                    >  2:1702309/1‑149 (MQ=255)
                                                                             tGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCGATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCa                                                                  >  2:3887366/1‑149 (MQ=255)
                                                                                 aaGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGc                                                              >  2:885865/1‑149 (MQ=255)
                                                                                 aaGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGAAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGc                                                              >  2:3493778/1‑149 (MQ=255)
                                                                                    tGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAAt                                                           <  1:2578370/149‑1 (MQ=255)
                                                                                    tGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAAt                                                           <  2:3067945/149‑1 (MQ=255)
                                                                                    tGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAAt                                                           <  2:1053354/149‑1 (MQ=255)
                                                                                    tGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAAt                                                           <  1:2578672/149‑1 (MQ=255)
                                                                                      ccTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCa                                                         <  1:967773/149‑1 (MQ=255)
                                                                                       cTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCaa                                                        >  2:2048804/1‑149 (MQ=255)
                                                                                        tGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCaaa                                                       <  2:3832041/149‑1 (MQ=255)
                                                                                         gggTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAAc                                                      >  2:96239/1‑149 (MQ=255)
                                                                                            tGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTAGCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAGATGTGCTATGTTGGTAAATCAAAGCTTCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGAt                                                   <  1:3466381/149‑1 (MQ=255)
                                                                                               gCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCtt                                                <  2:1804773/149‑1 (MQ=255)
                                                                                                cGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTc                                               <  2:1223146/149‑1 (MQ=255)
                                                                                                 gggTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCa                                              >  1:362007/1‑149 (MQ=255)
                                                                                                 gggTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCa                                              >  1:286903/1‑149 (MQ=255)
                                                                                                       aGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGa                                        >  1:3708032/1‑149 (MQ=255)
                                                                                                       aGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGa                                        <  1:1479556/149‑1 (MQ=255)
                                                                                                        ggCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGaa                                       >  2:3654464/1‑149 (MQ=255)
                                                                                                          cTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAAt                                     <  2:3827122/149‑1 (MQ=255)
                                                                                                          cTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAACCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAAt                                     <  1:3831272/149‑1 (MQ=255)
                                                                                                            ggCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTg                                   >  2:800151/1‑149 (MQ=255)
                                                                                                            ggCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTg                                   >  2:800032/1‑149 (MQ=255)
                                                                                                              cAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGcc                                 <  1:1848115/149‑1 (MQ=255)
                                                                                                              cAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGcc                                 <  1:1830771/149‑1 (MQ=255)
                                                                                                               aaTCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACTCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGccc                                <  1:1728284/149‑1 (MQ=255)
                                                                                                               aaTCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGccc                                <  2:1827418/149‑1 (MQ=255)
                                                                                                               aaTCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGccc                                <  1:3941646/149‑1 (MQ=255)
                                                                                                                   cAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATTCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATAAAACGATCTTCACGCAGAAATTGCCCGATa                            >  1:1060577/1‑149 (MQ=255)
                                                                                                                   cAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATa                            <  1:919752/149‑1 (MQ=255)
                                                                                                                   cAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATa                            >  1:3117885/1‑149 (MQ=255)
                                                                                                                   cAGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATa                            <  2:2846018/149‑1 (MQ=255)
                                                                                                                    aGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCTATAc                           >  1:2830434/1‑149 (MQ=255)
                                                                                                                    aGGTTTCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAc                           >  2:4025933/1‑149 (MQ=255)
                                                                                                                       tttCTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcg                        >  1:229348/1‑149 (MQ=255)
                                                                                                                          cTACCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggcg                     >  2:2374332/1‑149 (MQ=255)
                                                                                                                            aCCTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggcgcg                   >  2:3158664/1‑149 (MQ=255)
                                                                                                                             ccTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAACTTGCCCGATAcgcggcgcgg                  >  2:2194818/1‑149 (MQ=255)
                                                                                                                             ccTGGCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggcgcgg                  <  1:306379/149‑1 (MQ=255)
                                                                                                                                ggCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa               <  1:1756035/149‑1 (MQ=255)
                                                                                                                                 gCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAt              <  2:2753987/149‑1 (MQ=255)
                                                                                                                                 gCTGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAt              <  2:3357379/149‑1 (MQ=255)
                                                                                                                                   tGTCGCGCTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTa            <  2:2395043/149‑1 (MQ=255)
                                                                                                                                          cTGCGCCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCt     <  1:3060510/149‑1 (MQ=255)
                                                                                                                                            gcgcCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAGACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc   <  2:674331/149‑1 (MQ=255)
                                                                                                                                            gcgcCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc   <  2:674712/149‑1 (MQ=255)
                                                                                                                                            gcgcCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc   <  1:850340/149‑1 (MQ=255)
                                                                                                                                            gcgcCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc   <  1:3874400/149‑1 (MQ=255)
                                                                                                                                            gcgcCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc   >  2:2251891/1‑149 (MQ=255)
                                                                                                                                             cgcCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTccc  <  2:441477/149‑1 (MQ=255)
                                                                                                                                             cgcCT‑GGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTccc  <  2:202968/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
ACCGTTATCCTGATAAAAACCATTCAGGCTGGTTTGTTTACGGAAGGGGGCCGACTGGCGAATTAAATCCAGCACCATGGTAAGTGCCTGGGTGAGCGGGTTCAGGCTGGCAATCCAGGTTTCTACCTGGCTGTCGCGCTGCGCCTGGGGTAGATGCAGCCAAATGTGCAATGTAGGTAAATCAAAGCTGCAACAGCCGCCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCC  >  CP009273/108502‑108792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑