New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 2871455257 (1.090)3 (0.020) 3/216 NT 1.4% intergenic (+478/+473) iap/ygbF aminopeptidase in alkaline phosphatase isozyme conversion/CRISPR adaptation ssRNA endonuclease
?CP009273 2871641 = 220 (1.200)intergenic (+664/+287) iap/ygbF aminopeptidase in alkaline phosphatase isozyme conversion/CRISPR adaptation ssRNA endonuclease
Rejected: Frequency below/above cutoff threshold.

Only 100 of 362 total aligned reads displayed.

TATCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCG  >  CP009273/2871309‑2871603
                                                                                                                                                  |                                                                                                                                                    
 aTCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGACCTCTAGt                                                                                                                                                   >  1:1421790/1‑149 (MQ=255)
  tCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGACCTCTAGtt                                                                                                                                                  >  2:2683192/1‑149 (MQ=255)
  tCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGtt                                                                                                                                                  >  1:2250481/1‑149 (MQ=255)
  tCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGtt                                                                                                                                                  >  2:3420384/1‑149 (MQ=255)
   ccccGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGttt                                                                                                                                                 >  1:3886587/1‑149 (MQ=255)
    cccGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTc                                                                                                                                                <  2:1820166/149‑1 (MQ=255)
    cccGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTc                                                                                                                                                <  2:2209429/149‑1 (MQ=255)
       gCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGGTGGCGAGGTGACCTGTCGCCTGGTCGGAAACTCCTCCGGGGGGTGGCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGt                                                                                                                                             <  1:9244/149‑1 (MQ=255)
         tGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTAt                                                                                                                                           <  1:787899/149‑1 (MQ=255)
          ggCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTAtc                                                                                                                                          >  1:1070956/1‑149 (MQ=255)
           gcgcGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTAtct                                                                                                                                         <  1:182348/149‑1 (MQ=255)
              cgGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCg                                                                                                                                      <  1:2675962/149‑1 (MQ=255)
               ggggAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCgg                                                                                                                                     >  2:2016051/1‑149 (MQ=255)
                gggAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGa                                                                                                                                    <  1:1909502/149‑1 (MQ=255)
                    aCTCTCGGCGGATTCGGTTGAAGGCACCTCCAGCCGCGGTTTATCCCCGCTGGCGCGGGGAACTCACGGCGGCTGGCATTCCCGACCGCGGCGCGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTta                                                                                                                                <  2:1625697/149‑1 (MQ=16)
                       ctGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATaa                                                                                                                             <  2:1389531/149‑1 (MQ=255)
                        tGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATaaa                                                                                                                            <  2:1895406/149‑1 (MQ=255)
                             ggcTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGa                                                                                                                       >  1:1021291/1‑149 (MQ=255)
                                ttgccttgcAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTGTATCCCCGCTGGCGCGGGGACCTCTCGTTTCCGGATCTCCGGATTTCTCCAGCTGACgg                                                                                                                    >  2:2639481/1‑149 (MQ=255)
                                 tgccttgcAGCCAGCTCCAGCAGCGGTTTAGCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGt                                                                                                                   <  2:503818/149‑1 (MQ=255)
                                          gccagcTCCAGCAGCGGTTTAGCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCg                                                                                                          <  2:2487487/149‑1 (MQ=255)
                                           ccagcTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTGTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGc                                                                                                         <  1:865691/149‑1 (MQ=255)
                                            cagcTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCt                                                                                                        <  2:1855510/149‑1 (MQ=255)
                                            cagcTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCt                                                                                                        <  1:3028972/149‑1 (MQ=255)
                                             agcTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTg                                                                                                       <  1:802585/149‑1 (MQ=255)
                                              gcTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCACCCTGGCGGGAAAGCACATGCTGTGAGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTGGGTTCCCGATCACCGGATGTTTAGAGGAGACGGTTTATCCCCGCTgg                                                                                                      >  2:2002107/1‑149 (MQ=255)
                                                   agcagcGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGTTTTATAAAGCTGACGGTTTATCCCCGCTGGCGCgg                                                                                                 <  1:2028080/149‑1 (MQ=255)
                                                   agcagcGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCgg                                                                                                 <  1:3613445/149‑1 (MQ=255)
                                                       gcGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGaa                                                                                             >  1:1870807/1‑149 (MQ=255)
                                                       gcGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGaa                                                                                             <  1:2134761/149‑1 (MQ=255)
                                                       gcGGTATCTCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTATCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGaa                                                                                             <  1:3524834/149‑1 (MQ=255)
                                                          gTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTc                                                                                          >  1:2782315/1‑149 (MQ=255)
                                                          gTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTc                                                                                          >  2:1035108/1‑149 (MQ=255)
                                                           tttATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTACGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGACCTCg                                                                                         >  1:39111/1‑149 (MQ=255)
                                                                ccccGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAggc                                                                                    >  2:3500555/1‑149 (MQ=255)
                                                                 cccGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAggcg                                                                                   <  2:2281628/149‑1 (MQ=255)
                                                                       ggCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCAGTATCTCCGGATTTATAAAGCTGACGGTTTATGCCCGCTGGCGCGGGGACCTCGCTGGCGGCGCcg                                                                             >  2:2533489/1‑149 (MQ=255)
                                                                              ggAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAggg                                                                      >  1:1526209/1‑149 (MQ=255)
                                                                                aaCTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTa                                                                    >  2:3745173/1‑149 (MQ=255)
                                                                                aaCTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTa                                                                    >  1:610741/1‑149 (MQ=255)
                                                                                aaCCCATGCTGGCTGGAAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttg                                                                    <  2:610742‑M1/149‑83 (MQ=255)
                                                                                  cTCAAGCTGGCTGGCTATCTCGTCCCGGGTGAGTCCGGTTTATCCCCGCTGGCGCTGGGAACTCTAGTTTCCGTATCTCCGGCTTTATTAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATg                                                                  <  2:2367368/149‑1 (MQ=255)
                                                                                  cTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATg                                                                  >  1:3347244/1‑149 (MQ=255)
                                                                                   tccaGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATgc                                                                 <  1:1160926/146‑1 (MQ=255)
                                                                                   tCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggct                                                                 <  1:2638203‑M1/149‑86 (MQ=255)
                                                                                   tCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTCGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATgc                                                                 >  2:3253973/1‑149 (MQ=255)
                                                                                   tCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATgc                                                                 <  1:813599/149‑1 (MQ=255)
                                                                                      aGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGcgcg                                                              >  1:1947812/1‑149 (MQ=255)
                                                                                      aGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGAGCAGGGTATGcgcg                                                              >  1:2727386/1‑149 (MQ=255)
                                                                                       gctggctgGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGa                                                             >  1:2718251/1‑149 (MQ=255)
                                                                                       gctggctgGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGa                                                             >  1:3974183/1‑149 (MQ=255)
                                                                                        ctggcgggCAATCTCTCTCCGGGTGAGTCCGGTTTATCCCCGCTCGCGCGGGGAACTCTAGGTTCCGTATCGCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGAt                                                            <  2:2148181/149‑1 (MQ=255)
                                                                                         tggctggcAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGAtt                                                           >  1:3694512/1‑149 (MQ=255)
                                                                                                cAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGtt                                                    <  1:2750098/149‑1 (MQ=255)
                                                                                                  aTCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTa                                                  >  1:3551879/1‑149 (MQ=255)
                                                                                                   tctcTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGACCTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTAt                                                 >  1:313900/1‑149 (MQ=255)
                                                                                                               tGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCTGCGACGCGCAGCGTATGAGCGATTCGCGGTTTATCCCCGCTGgcgc                                     >  1:2558504/1‑149 (MQ=255)
                                                                                                                  gTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCggg                                  >  2:859580/1‑149 (MQ=255)
                                                                                                                  gTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGGTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGACCTCGCAGGCGGCGACGCGCAGGGGCGGCGCGATTCGCGGGTTATCCCCGCTGGCGCggg                                  >  1:1384036/1‑149 (MQ=255)
                                                                                                                     cGGTTTATCCCCGCTGGCGCGGGGAACTCTcaacattatcaattacacccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaac                               <  2:3317519‑M1/149‑120 (MQ=255)
                                                                                                                      ggTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAAc                              <  1:1345578/149‑1 (MQ=255)
                                                                                                                       gTTTATCCCCGCTGGCGCGGGGAACTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactc                             >  2:3382605‑M1/1‑28 (MQ=255)
                                                                                                                        tttATCCCCGCTGGCGCGGGGAACTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactct                            <  1:171022‑M1/149‑123 (MQ=255)
                                                                                                                          tATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCCGGCGGCGACGCGCAGCGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGCACTcgc                          >  2:3016831/1‑149 (MQ=255)
                                                                                                                          tATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTcgc                          >  1:4075885/1‑149 (MQ=255)
                                                                                                                          tATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTcgc                          >  1:2873422/1‑149 (MQ=255)
                                                                                                                          tATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTcgc                          <  1:2863271/149‑1 (MQ=255)
                                                                                                                           aTCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTcgcg                         >  1:3215906/1‑149 (MQ=255)
                                                                                                                            tCCCCGCTGGCGCGGGGAACTCTcaacattatcactcccaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgt                        <  2:3917446‑M1/149‑127 (MQ=255)
                                                                                                                            gccccGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGa                        <  1:3430809/148‑1 (MQ=255)
                                                                                                                             ccccGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGAc                       <  2:3000186/149‑1 (MQ=255)
                                                                                                                              cccGCTGGCGCGGGGAACTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtga                      >  2:1069344‑M1/1‑21 (MQ=255)
                                                                                                                               ccGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCg                     >  2:1967141/1‑149 (MQ=255)
                                                                                                                                 gCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGAtt                                                           <  1:2951792/109‑1 (MQ=255)
                                                                                                                                  cTGGCGCGGGGAACTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgt                  >  1:3734729‑M1/1‑17 (MQ=255)
                                                                                                                                  cTGGCGCGGGGAACTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgt                  >  1:1689375‑M1/1‑17 (MQ=255)
                                                                                                                                  cTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTc                  <  1:1035144/149‑1 (MQ=255)
                                                                                                                                  cTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTc                  <  2:1515594/149‑1 (MQ=255)
                                                                                                                                   tGGCGCGGGGAACTCTcaacattatcaattacacccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgta                 <  1:658010‑M1/149‑134 (MQ=255)
                                                                                                                                   tGGCGCGGGGAACACTcaccattaacacttacccccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgta                 <  1:3790167‑M1/149‑134 (MQ=255)
                                                                                                                                    ggCGCGGGGAACTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgtat                <  1:1965834‑M1/149‑135 (MQ=255)
                                                                                                                                    ggCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAg                <  2:1070974/149‑1 (MQ=255)
                                                                                                                                     gcgcGGGGAACTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgtatc               >  2:1734984‑M1/1‑14 (MQ=255)
                                                                                                                                       gcgGGGAACTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgtatcgc             <  2:3604215‑M1/149‑138 (MQ=255)
                                                                                                                                       gcgGGGAACTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgtatcgc             <  2:2782315‑M1/149‑138 (MQ=255)
                                                                                                                                          gggACCTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgtatcgccgc          >  2:2430084‑M1/1‑9 (MQ=255)
                                                                                                                                          gggAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTc          >  2:3790167/1‑149 (MQ=255)
                                                                                                                                          gggAACTCTAGGTTCCGGATCGCCGGATTTATAAAGCTGACGGTTGATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTc          <  2:4020631/149‑1 (MQ=255)
                                                                                                                                             aaCTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAg       >  2:412655/1‑149 (MQ=255)
                                                                                                                                              aCTCTcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgtatcgccgcgcgt      >  1:3383431‑M1/1‑5 (MQ=255)
                                                                                                                                              aCTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGa      >  2:3151881/1‑149 (MQ=255)
                                                                                                                                               ctctcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgtctcgccgcgcgtc     >  1:1079042‑M1/1‑4 (MQ=255)
                                                                                                                                               ctctAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGACCTCGCGACCGCTCAGAACTTCCAGAc     >  2:2915455/1‑149 (MQ=255)
                                                                                                                                               ctctAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGAc     <  2:3342796/149‑1 (MQ=255)
                                                                                                                                                 ctcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgtatcgccgcgcgtctg   >  1:42636‑M1/1‑2 (MQ=255)
                                                                                                                                                 ctcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgtatcgccgcgcgtctg   >  2:597262‑M1/1‑2 (MQ=255)
                                                                                                                                                 ctcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcgtcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgtatcgccgcgcgtctg   >  2:1885491‑M1/1‑2 (MQ=255)
                                                                                                                                                  tcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcggctgcggtttatccccgctggcgcggggaactctgcgtgagcgtatcgccgcgcgtctgc  >  2:3316025‑M1/1‑1 (MQ=255)
                                                                                                                                                  tAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGCAATTCCAGACCCg  >  2:3818728/1‑149 (MQ=255)
                                                                                                                                                  tAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCg  >  1:2315426/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
TATCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCG  >  CP009273/2871309‑2871603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.