| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 2,080,274 | IS2 (–) +5 bp | 100% | coding (266‑270/1359 nt) | plaP ← | putrescine importer, low affinity |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2062422 = | NA (NA) | 209 (0.890) | 113/276 | NT | 98.1% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | CP009273 | = 2080278 | 4 (0.020) | coding (266/1359 nt) | plaP | putrescine importer, low affinity | |||||
| * | ? | CP009273 | = 2063752 | NA (NA) | 229 (0.970) | 115/276 | NT | 98.2% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | CP009273 | 2080274 = | 4 (0.020) | coding (270/1359 nt) | plaP | putrescine importer, low affinity | |||||
Only 100 of 488 total aligned reads displayed.
AGGCCACCAGCGCCACCACAAACATCCACGATGGGATGGAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCGGCACATGACCATCCGTGAGGCCTGAAACGATAC > CP009273/2080126‑2080422 | tcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAt < 2:3423022‑M2/3‑1 (MQ=255) aCCAGCGCCACCACAAACATCCACGATGGGATGGAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGt > 2:2233483‑M2/1‑148 (MQ=255) ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGAt < 2:329480‑M2/7‑1 (MQ=255) tcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGAtt < 2:443961‑M2/8‑1 (MQ=255) tcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGAtt < 2:1637341‑M2/8‑1 (MQ=255) cAGCGCCACCACAAACATCCACGATGGGATGGAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtgg > 2:586502‑M2/1‑146 (MQ=255) gcgcCACCACAAACATCCACGATGGGATGGAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggat > 2:3941519‑M2/1‑144 (MQ=255) ctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaaatgtctatc > 1:758937‑M2/140‑143 (MQ=255) ctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTc < 1:3679328‑M2/10‑1 (MQ=255) ctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTc > 2:2281396‑M2/140‑149 (MQ=255) ctccaccacaAAAATCCACGATGGGATGGAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATTGtggatt > 2:530084‑M2/3‑143 (MQ=255) tgtggtacgccgtctgcggttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTgg < 2:2221187‑M2/13‑1 (MQ=255) ccaccaCAAACATCCACGATGGGATGGAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttg < 1:42382‑M2/149‑9 (MQ=255) gggacgccgtcagcgattctccggccctcagacatcactcatctgttctccaatgactagtcgacaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCg < 2:2126133‑M2/16‑1 (MQ=255) acacaTCCACGATGGGATGGAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctat > 1:100430‑M2/3‑134 (MQ=255) aaaCATCCACGATGGGATGGAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctat > 1:2307625‑M2/1‑134 (MQ=255) ccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAgtg < 2:2760700‑M2/22‑1 (MQ=255) gtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTa < 1:3322138‑M2/24‑1 (MQ=255) aTCCACGATGGGATGGAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatattt < 2:135895‑M2/149‑20 (MQ=255) ctgcgtttctccggccctaagacatcaatcatctgttctccaaggactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATg < 2:2463889‑M2/26‑1 (MQ=255) ccACGATGGGATGGAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttcc > 2:2195345‑M2/1‑128 (MQ=255) gatgtgatggAACGCACCAGAGCTTCAAAATAGATTTTAGACAGTATAATGTTTATCATCGTCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGATTTCTGGGGGTAAGTGTATGCaga < 2:3576207/149‑1 (MQ=255) gatgggatggAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagac < 1:2765776‑M2/149‑26 (MQ=255) tttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCagag > 1:1574866‑M2/119‑149 (MQ=255) tttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCagag > 1:3564108‑M2/119‑149 (MQ=255) atggAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgt > 1:3597298‑M2/1‑118 (MQ=255) tggAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgtt > 1:2475814‑M2/1‑117 (MQ=255) gccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGa > 2:1143419‑M2/111‑149 (MQ=255) gAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttat < 1:1654050‑M2/149‑35 (MQ=255) aGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatca < 1:2746135‑M2/149‑37 (MQ=255) aagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGAt < 2:785430‑M2/44‑1 (MQ=255) aagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGAt < 2:965956‑M2/44‑1 (MQ=255) cAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaac < 2:2550196‑M2/149‑43 (MQ=255) atcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctcAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAgcgg > 1:3853731‑M2/101‑149 (MQ=255) atcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAgcgg > 1:2671855‑M2/101‑149 (MQ=255) aatcatctgttctccaatgactagtctaaaaactagtattaagactatcacaaatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGa > 2:67510‑M2/98‑149 (MQ=255) ttCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccatta < 2:1733401‑M2/149‑49 (MQ=255) atcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGGATTTCTGGGCGTACGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGaa > 2:3471976‑M2/97‑149 (MQ=255) aaaaTAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaa > 2:1441345‑M2/1‑98 (MQ=255) aaaaGAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaa > 2:3145476‑M2/1‑98 (MQ=255) tctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAg < 2:2701263‑M2/57‑1 (MQ=255) tgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCt > 2:3520299‑M2/91‑149 (MQ=255) aTAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcc < 1:3046865‑M2/149‑55 (MQ=255) tAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGAAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagccc < 2:3040761‑M2/149‑56 (MQ=255) ttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTc > 2:1900872‑M2/89‑149 (MQ=255) aTTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct > 2:1539829‑M2/1‑91 (MQ=255) ttttCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctg < 1:293315‑M2/149‑60 (MQ=255) cAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcaga > 2:3317531‑M2/1‑83 (MQ=255) aGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagat < 1:3896486‑M2/149‑68 (MQ=255) agtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattctgggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCagag > 1:1374146‑M2/76‑149 (MQ=255) agtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCagag < 1:3414817‑M2/74‑1 (MQ=255) aGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatt < 1:1173830‑M2/149‑71 (MQ=255) aGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACAAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccataacaagcccgatgccgcagatatt < 2:843261‑M2/149‑71 (MQ=255) tctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGcc > 1:2510795‑M2/74‑149 (MQ=255) gAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattc > 2:249790‑M2/1‑78 (MQ=255) aTGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattccc > 2:1421718‑M2/1‑76 (MQ=255) aaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTaaa < 1:2048586‑M2/81‑1 (MQ=255) aactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAAc > 2:180933‑M2/68‑149 (MQ=255) gATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggc > 1:210105‑M2/1‑71 (MQ=255) tagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAgg < 1:2038350‑M2/85‑1 (MQ=255) atcGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagc < 2:1274528‑M2/149‑83 (MQ=255) tattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATc < 2:2006532‑M2/88‑1 (MQ=255) attaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCg > 2:3772521‑M2/61‑149 (MQ=255) taagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGca > 1:800700‑M2/59‑149 (MQ=255) aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGcaa > 1:577166‑M2/58‑149 (MQ=255) aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGcaa > 2:1941728‑M2/58‑149 (MQ=255) gcgAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac > 1:3485908‑M2/1‑61 (MQ=255) gcgAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac > 2:2648721‑M2/1‑61 (MQ=255) gactatcacttatttaagtgatcttggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGcaatc < 2:3664332‑M2/94‑1 (MQ=255) cAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagc < 1:1735298‑M2/149‑94 (MQ=255) acttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGa > 1:4019458‑M2/49‑149 (MQ=255) aTAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgca < 1:3202856‑M2/149‑97 (MQ=255) cttatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGaa < 1:3099904‑M2/102‑1 (MQ=255) tatttaagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACg > 2:1031988‑M2/46‑149 (MQ=255) tCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactat > 1:1540712‑M2/1‑49 (MQ=255) tCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactat > 1:1215415‑M2/1‑49 (MQ=255) aGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcg < 2:1583311‑M2/149‑104 (MQ=255) gCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgg < 2:2583546‑M2/149‑105 (MQ=255) aagtgatattggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCANCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAg < 1:2085349‑M2/109‑1 (MQ=255) gaagaCCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcc > 2:3224463‑M2/1‑40 (MQ=255) agaCCAACCCACCATAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccat < 2:287756‑M2/149‑112 (MQ=255) ttggttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCgg > 2:3799285‑M2/33‑149 (MQ=255) ttgtctggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCGGcaca < 1:163748‑M2/121‑1 (MQ=255) caccaTAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataa > 1:2245294‑M2/1‑29 (MQ=255) tggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCGGCACATGAcc > 1:1340444‑M2/24‑149 (MQ=255) ggagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCGGCACATGACCa < 1:1947972‑M2/127‑1 (MQ=255) gagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCGGCACATGACCAt > 1:507369‑M2/22‑149 (MQ=255) gagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCGGCACATGACCAt > 1:1906312‑M2/22‑149 (MQ=255) gagattcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCGGCACATGACCAt > 1:282635‑M2/22‑149 (MQ=255) tAAAGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctc < 1:1445850‑M2/149‑126 (MQ=255) ttcagggggccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCGGCACATGACCATCCGt > 1:3983901‑M2/18‑149 (MQ=255) aGCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaa < 1:913151‑M2/149‑129 (MQ=255) gCCGACAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac > 2:2843857‑M2/1‑20 (MQ=255) aCAGTCGGGCTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcct < 2:4016982‑M2/149‑134 (MQ=255) ccagtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCGGCACATGACCATCCGTGAGGCCTGa > 1:2365630‑M2/9‑149 (MQ=255) agtctaAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCGGCACATGACCATCCGTGAGGCCTGaaa > 1:2622205‑M2/7‑149 (MQ=255) cTAATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggt < 2:1148451‑M2/149‑143 (MQ=255) aAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCGGCACATGACCATCCGTGAGGCCTGAAACGATa > 1:2569207‑M2/2‑149 (MQ=255) aaTGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttc < 1:1096796‑M2/149‑145 (MQ=255) aaTGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgc < 2:2939591‑M2/142‑138 (MQ=255) | AGGCCACCAGCGCCACCACAAACATCCACGATGGGATGGAAGGCACCAGAGCTTCAAAATAGATTTTCGCCAGTAGAATGTTGATCATCGGCGCGAACAGATAGTCGAGCAGAGAAGACCAACCCACCATAAAGCCGACAGTCGGGCTAATGGATTTCTGGGCGTAAGTGTATGCAGAGCCAGCAGAAGGATAGCGGCGAACCAGCTTCCCGTAGCTCAGAGCCGTAAACAGGATCGCAATCAATGCGAACGCATAGGCTGTCGGCACATGACCATCCGTGAGGCCTGAAACGATAC > CP009273/2080126‑2080422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |