| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,696,327 | A→T | 43.4% | T294T (ACT→ACA) | dppD ← | dipeptide/heme transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,696,327 | 0 | A | T | 43.4% | 102.9 / 293.6 | 210 | T294T (ACT→ACA) | dppD | dipeptide/heme transporter |
| Reads supporting (aligned to +/- strand): ref base A (76/43); new base T (53/38); total (129/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 212 total aligned reads displayed.
GATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTGAGTATACGGGTGA > CP009273/3696181‑3696471 | gATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGt > 2:268671/1‑149 (MQ=255) aTAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTg > 2:1416714/1‑149 (MQ=255) aGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGc > 2:3257812/1‑149 (MQ=255) gCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCa > 2:1028193/1‑149 (MQ=255) gCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCa < 1:847315/149‑1 (MQ=255) ccTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCAt < 2:3143813/149‑1 (MQ=255) gCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAgg > 1:2237523/1‑149 (MQ=255) aCAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGc > 1:3223220/1‑149 (MQ=255) aCAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGc > 2:3666526/1‑149 (MQ=255) aCAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGc < 1:144656/149‑1 (MQ=255) aCAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGc > 1:1518531/1‑149 (MQ=255) cAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCa > 2:201053/1‑149 (MQ=255) gCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAgc > 2:2722402/1‑149 (MQ=255) gCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAgc > 2:1406998/1‑149 (MQ=255) gCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAgc > 2:2722980/1‑149 (MQ=255) gCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAgc > 1:566201/1‑149 (MQ=255) ggTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAgcgc < 2:679213/149‑1 (MQ=255) gttgCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGt > 1:811670/1‑149 (MQ=255) ttgCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGtt < 2:3134763/149‑1 (MQ=255) ttgCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGtt > 2:2589939/1‑149 (MQ=255) ttgCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGtt < 2:2317231/149‑1 (MQ=255) gCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTaa < 2:1867860/149‑1 (MQ=255) gCAGGGTGGCCTCTTGCGTACTCAGAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTaa < 2:3908398/149‑1 (MQ=255) aGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAgc > 1:1461416/1‑149 (MQ=255) gggTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAgca > 2:4000254/1‑149 (MQ=255) ggTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAgcag < 1:3812507/149‑1 (MQ=255) tctTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCg > 1:1142452/1‑149 (MQ=255) ctTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGt < 2:2329465/149‑1 (MQ=255) ttGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGtt < 1:1178214/149‑1 (MQ=255) tACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGc > 2:3178541/1‑149 (MQ=255) tACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGc > 2:3168451/1‑149 (MQ=255) aCTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCg > 1:3440847/1‑149 (MQ=255) tCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGt < 2:1333655/149‑1 (MQ=255) cATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTc < 2:180943/149‑1 (MQ=255) aTAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCCGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCg > 1:2988616/1‑149 (MQ=255) aTAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCg > 1:3646850/1‑149 (MQ=255) tAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGt > 2:2457301/1‑149 (MQ=255) aGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTa > 2:359957/1‑149 (MQ=255) aGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTa > 2:2430120/1‑149 (MQ=255) gtgtCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTAc > 2:15504/1‑149 (MQ=255) gtgtCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTAc > 2:2333653/1‑149 (MQ=255) gCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCg < 2:697926/149‑1 (MQ=255) tCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGa > 2:1722325/1‑149 (MQ=255) cccGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGaa < 2:3194441/149‑1 (MQ=255) cccGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGaa < 2:1142452/149‑1 (MQ=255) cccGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGaa > 2:3634680/1‑149 (MQ=255) cGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACg > 1:1388404/1‑149 (MQ=255) tcatcaAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACAcc > 1:2069304/1‑149 (MQ=255) tcatcaAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACAcc > 1:1508381/1‑149 (MQ=255) atcaAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTg < 2:2650680/149‑1 (MQ=255) atcaAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTg > 2:2849377/1‑149 (MQ=255) atcaAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTg > 2:3857986/1‑149 (MQ=255) tcaAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTgg > 1:4027592/1‑149 (MQ=255) tcaAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTgg > 2:437251/1‑149 (MQ=255) aGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCaa > 2:468275/1‑149 (MQ=255) aGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCaa < 2:524572/149‑1 (MQ=255) aGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCaa < 1:2160931/149‑1 (MQ=255) gggTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAacga > 2:92443/1‑149 (MQ=255) gggTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAacga > 2:1490595/1‑149 (MQ=255) aTGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCa > 1:2337491/1‑149 (MQ=255) tGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAg > 1:255095/1‑149 (MQ=255) tGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAg > 1:1779260/1‑149 (MQ=255) ggCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGa < 1:3258941/149‑1 (MQ=255) gCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGAc > 1:4056509/1‑149 (MQ=255) tttGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGtt > 1:551768/1‑149 (MQ=255) gACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCttt < 2:2038298/149‑1 (MQ=255) gACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTcc > 1:3143607/1‑149 (MQ=255) gACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTcc > 1:1089692/1‑149 (MQ=255) gACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTcc > 2:1011829/1‑149 (MQ=255) gCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGa < 1:4000254/149‑1 (MQ=255) ccGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGc < 1:3099118/149‑1 (MQ=255) ccGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGc > 2:2097213/1‑149 (MQ=255) gCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTc < 2:315148/149‑1 (MQ=255) gAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTg > 2:1631915/1‑149 (MQ=255) gAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTg > 2:3758877/1‑149 (MQ=255) gCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGc < 1:1028193/149‑1 (MQ=255) ttCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAgcgc < 1:3893458/149‑1 (MQ=255) cAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGcgcac < 2:3368208/149‑1 (MQ=255) ccGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACgcagc > 2:2762790/1‑149 (MQ=255) ggTTCTTCAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCaa > 2:2151351/1‑149 (MQ=255) ggTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCaa < 1:3291887/149‑1 (MQ=255) gTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAAt < 2:295908/149‑1 (MQ=255) gTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAAt < 2:896312/149‑1 (MQ=255) gTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAAt > 1:1035968/1‑149 (MQ=255) gTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAAt > 1:1925482/1‑149 (MQ=255) gTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAAt > 1:200637/1‑149 (MQ=255) ttcttcAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATg > 1:2933634/1‑149 (MQ=255) ttcttcAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATg > 2:3685326/1‑149 (MQ=255) tcAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTg > 2:118466/1‑149 (MQ=255) tcAGCGCGACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTg < 1:1085923/149‑1 (MQ=255) tcAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTg < 1:1319345/149‑1 (MQ=255) cgcgACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTGAGta < 1:249549/149‑1 (MQ=255) cgACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGTGCAAATTCTGGCAGCGCACGCAGCAATGCCTGAGtata > 1:1679706/1‑149 (MQ=255) cgACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTGAGtata > 1:1263979/1‑149 (MQ=255) gACATCTGTCTGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTGAGTATAc < 1:466768/149‑1 (MQ=255) aCATCTGTCTGTGGCATAGGGGCAGCGCGTGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTGAGTATACg > 1:2629156/1‑149 (MQ=255) aTCTGTCAGTTGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTGAGTATACggg > 1:4082190/1‑149 (MQ=255) aTCTGTCAGTTGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTGAGTATACggg > 1:2047958/1‑149 (MQ=255) tctgtctgTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTGAGTATACGGGt < 2:591749/149‑1 (MQ=255) tGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTGAGTATACGGGTGa > 1:2117383/1‑149 (MQ=255) | GATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCATTTGGACTGACGCCCGTCAGCGAGCATATTCAGCGCCGGTTCTTCAGCGCGACATCTGTCAGTGGCATAGGGGCAGCGCGGGTTAAGCAGGCAGCCGTTCGGGCGGTCGTACTTGCCGGGAACGACACCTGGCAACGACGCCAGACGTTCTTTGTCCTGAGCAAATTCTGGCAGCGCACGCAGCAATGCCTGAGTATACGGGTGA > CP009273/3696181‑3696471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |