BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP009273	3,822,345	T→G	9.3%	V14G (GTT→GGT)	xanP →	xanthine permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	3,822,345	0	T	G	9.3%	391.1 / 4.7	187	V14G (GTT→GGT)	xanP	xanthine permease
Reads supporting (aligned to +/- strand): ref base T (74/90); new base G (19/4); total (93/94)
Fisher's exact test for biased strand distribution p-value = 7.31e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 192 total aligned reads displayed.

AAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGGTTTA  >  CP009273/3822197‑3822493

aaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTGTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGt                                                                                                                                                      <  2:3438388/149‑1 (MQ=255)

 aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGtt                                                                                                                                                     >  2:1166192/1‑149 (MQ=255)

 aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGtt                                                                                                                                                     <  2:1885852/149‑1 (MQ=255)

   aGTGCATGTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTgc                                                                                                                                                   <  2:2635723/149‑1 (MQ=255)

    gTGCATGTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTgcg                                                                                                                                                  <  2:2597559/149‑1 (MQ=255)

     tGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTgcgc                                                                                                                                                 >  2:839951/1‑149 (MQ=255)

         tttATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATTCGCAAACGGTTTCGCAGAc                                                                                                                                             >  1:2171637/1‑149 (MQ=255)

           tATCTAATTTAAATATTTAGATGAGTATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTGGCGCAGACTc                                                                                                                                           <  2:3151206/149‑1 (MQ=255)

              ctcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCaaa                                                                                                                                        >  2:3571612/1‑149 (MQ=255)

                cATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCaaaaa                                                                                                                                      >  1:3381941/1‑148 (MQ=255)

                  tttAAATATTTAGATGAGGATGTGGCAAACGATTTCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAATATGCGCAACCGGTTGCGCAGACTCaaatgcg                                                                                                                                    >  2:4066084/1‑145 (MQ=255)

                    tAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGGTGCGCAGACACAAAAAAGCg                                                                                                                                  >  1:1908319/1‑149 (MQ=255)

                     aaaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCACACACAAAAAAGCGa                                                                                                                                 >  1:2674888/1‑149 (MQ=255)

                       atatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGTTGTGTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGTTTGCGCAGACTCAAAACAGCGAAc                                                                                                                               <  2:3510763/149‑1 (MQ=255)

                       atatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAAc                                                                                                                               >  2:1515643/1‑149 (MQ=255)

                           ttAGTTGTGGTTGTGGAAACCGTTGGATTTTCTCTTTCGGTCAGATAAAATGCCCGGTTTGCTACCACGGGTTTGTTTTGGATGTCTGTTTCCCCCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGAt                                                                                                                           <  1:1367900/149‑1 (MQ=255)

                             aGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAAATGAttt                                                                                                                         >  2:458275/1‑149 (MQ=255)

                              gATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTa                                                                                                                        >  2:2441037/1‑149 (MQ=255)

                               aTGAGTTTGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGTTGTCTGTTGCCACCCTCGAGTCAGAAAATGCGCAACGGGTTGCGCAGACTCAAAACAGCGAACTGATTTAc                                                                                                                       <  2:49823/149‑1 (MQ=255)

                                       gtgGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGa                                                                                                               >  2:3310378/1‑149 (MQ=255)

                                        tgGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGGCAACCGCGTGCGCACACTCAAAACACCGAAAAGATTTAACGGCTTGaa                                                                                                              >  1:826915/1‑149 (MQ=255)

                                         ggCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGTTTTGTTTTCGATGTCTGTTTCCACCCTCGAGTAAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAg                                                                                                             <  2:80533/149‑1 (MQ=255)

                                         ggCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGGAACCCGTTGGGCAGACTCAAAAAAACGAACAGATTTACACTGTTGaat                                                                                                             >  1:778316/1‑148 (MQ=255)

                                          gCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGa                                                                                                            >  2:1379226/1‑149 (MQ=255)

                                          gCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGa                                                                                                            >  2:2750075/1‑149 (MQ=255)

                                             aaCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCCCCGGGTGCGCAGACTCAAAAAACCGAACAGATTTAACCTCTTGAAGATCg                                                                                                         >  1:2582364/1‑149 (MQ=255)

                                             aaCGTTGGGTTTTCTCTTTCGGTCAGATAAAATGCCCGCTTTGCTACCACGGGTTTGTTTTCGATGTCTGTTTCCACCCGCGAGTCACAAAAGGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCg                                                                                                         <  2:1065650/149‑1 (MQ=255)

                                              aCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGt                                                                                                        >  2:2709196/1‑149 (MQ=255)

                                               ggTTTGCTTTTGTCTTTCGGTCAGATAAAAGGCCCGCTTTGCTACCAGGGGTTTGTTTTCGTTGTGTGTTACCACCCTCGAGTCACAAATTGCCCAACCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTc                                                                                                       <  1:119836/148‑1 (MQ=255)

                                               cGTTTGCTTTTCTCTTTCGTTCAGATAAAATGCCCTCTTTGCAACCACGGGATTTTTTTCGATGTGTGTTTCCACCCTCGTGACAGAAAAGGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTc                                                                                                       <  2:907427/149‑1 (MQ=255)

                                               cGTTTGCTTTTCTCTTTCGGTCACCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTc                                                                                                       <  2:1875989/149‑1 (MQ=255)

                                                gTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTGCGCAGACACAAAACAGCGAACAGATTTACCGTCTTGAAGATAGTcc                                                                                                      >  1:3290960/1‑149 (MQ=255)

                                                     cTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCCCCGGTTGCGCAGACTCAAAACACCGAACTCCTTTAACGTCTTGAATATAGGCcgccgc                                                                                                 >  1:3984081/1‑149 (MQ=255)

                                                        ttCTCTTTGGGACCGATAAATGGCCGGGTTTGCTACCCGGGTTTTGTTTTCGTTGTCGGTTTCCCCCCCCGCGACAGAAAAGGCGCACCGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTc                                                                                              <  1:3403400/149‑1 (MQ=255)

                                                        ttCTCTTTCGTTCAGAAAAACTCCCCTCTTTGCTACCTGGGTTTTGTTTTCGTTGTCTTTTACCCCCCTCTAGTCACAAAAGCCGCAACGGGGGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTc                                                                                              <  1:781275/149‑1 (MQ=255)

                                                        ttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTc                                                                                              <  2:782127/149‑1 (MQ=255)

                                                        ttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGGTGCGCAGTCTCAAAACAGCGCACGGATTTACCGTCTTGACGATCGTCCGCCGCTTc                                                                                              >  2:2513180/1‑149 (MQ=255)

                                                        ttCTCTTGCGGTCAGCTAAAATGCCCGCATTGCTACCACGGGATTGTTTTCGATGTCGGGTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTc                                                                                              <  2:782071/149‑1 (MQ=255)

                                                        ttCTCTTGCGGACACCTAAACGCCCCGCTTTGCTACCAGGGTTTTGTTTTCGTTGTGTGTTTCCACCCGCGAGTCATAATCTGCGCAACGGGGGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTc                                                                                              <  1:3690840/149‑1 (MQ=255)

                                                         tctcTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTAAAAAAAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCGTcc                                                                                             >  2:1414132/1‑149 (MQ=255)

                                                         tctcTTGCGGTCAGCAAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAAGGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTcc                                                                                             <  2:3183895/149‑1 (MQ=255)

                                                          ctctTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCt                                                                                            <  2:1292709/149‑1 (MQ=255)

                                                          ctcgTTCGGTCAGCTAAAAGGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTGCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCt                                                                                            <  2:235760/149‑1 (MQ=255)

                                                             tttCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTGCGCAGACTCAAAACAGCGAACAGATTTAACGTCTTGTAGATCGTCCGCCGCTTCCTCaa                                                                                         >  1:2413900/1‑149 (MQ=255)

                                                                 ggTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGGTGCGCCGACACAAAACATCGAACGGATTTACCGTCTTGAAGATCGGCCGCCGCTGCCTCAAAccc                                                                                     >  1:708888/1‑149 (MQ=255)

                                                                  gTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCCCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCt                                                                                    >  2:2791161/1‑149 (MQ=255)

                                                                    cAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCTACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGt                                                                                  <  2:3578024/149‑1 (MQ=255)

                                                                     agaaaaaaTGCCCGATTTGCTACCAGGGTTTTTTTTTCTTTGTCTGTTCCCACCCTCTAGTCAGAAATTGCGCACCCGGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGtt                                                                                 <  1:193062/145‑1 (MQ=255)

                                                                     aGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATTCGCAACACGGTGCGCAGTCACAAAAAAGCGAAAAGATTTAGCGTCTTGAATATCTTCCGCCCCATCCTCAAAcacagat                                                                                 >  1:276096/1‑143 (MQ=255)

                                                                     aGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGGTGCGCCGACTCAAAACAGCGAACTGATTTTACGTCTTGTAGATCGTCCGCCGCGTCCTCAAACCCGGtt                                                                                 >  1:2575564/1‑149 (MQ=255)

                                                                     aGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACAGCTTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGtt                                                                                 >  2:1888404/1‑149 (MQ=255)

                                                                     aGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACACAAAAAAACGAACAGATTTAAAGTCTTTTGGATCGTCCGCCGCTTCCTCAAAACCTGtt                                                                                 >  1:471202/1‑149 (MQ=255)

                                                                      gCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGTTGCGCAGACTCAAAACAACGAACTGATTTACCGTCTTGAATATCGTGCCCCCCGTCCTCAAACCCGGttt                                                                                >  1:1013858/1‑149 (MQ=255)

                                                                      gCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACACAAAAAAGCGAACTGATTTTCCGTCTTGTAGTTCGTCCGCCGCTTCCTCAAACCCTGttt                                                                                >  1:298604/1‑149 (MQ=255)

                                                                        tAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgc                                                                              <  2:200773/149‑1 (MQ=255)

                                                                        tAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACAGATTTAACGTCTTGAAGATAGTGCGCCGCTTCCGCCAACCCAGTTTgc                                                                              >  1:3197587/1‑149 (MQ=255)

                                                                        tAAAATGCCCGCTTGGCTACCACGGGATTGTTTGCGATGTCTGTTTCCACCCTCGAGTCATAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgc                                                                              <  2:2993953/149‑1 (MQ=255)

                                                                            aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccgcc                                                                          >  2:682754/1‑149 (MQ=255)

                                                                            aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccgcc                                                                          >  2:2860891/1‑149 (MQ=255)

                                                                                    tttGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCa                                                                  <  2:2258317/149‑1 (MQ=255)

                                                                                    ttggCTACCACGGGATGGTTTTCGATGTCTGTTTCCACCCTCGATTCACAAAATGCGAAACCGGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCa                                                                  <  2:346489/146‑1 (MQ=255)

                                                                                         tACCACGAGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCCGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCGGTTTGCCGCCTGGCAGCATctgg                                                             >  2:1779238/1‑148 (MQ=255)

                                                                                          aCCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATctgct                                                            >  2:1948755/1‑149 (MQ=255)

                                                                                             aCGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGGTGCGCACACACAAAAAAGCGAACAGATTTAACGTCTTTAAGATAGTCCGCCGCGTCCTCAAAACCGGTTTTCCGCCTGTCAGCAACAGCTGGc                                                         >  1:544563/1‑149 (MQ=255)

                                                                                               gggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGTAGATCGTACGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGa                                                       >  2:3833216/1‑149 (MQ=255)

                                                                                                gttttGTTTGCGTTGTCTTTTTCCACCCTCGCGACACAAATGGCGCACCCGGGTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCAGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGAt                                                      <  1:984873/146‑1 (MQ=255)

                                                                                                ggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCCGCATCTGCTGGCGAt                                                      >  2:2123970/1‑149 (MQ=255)

                                                                                                   ttGTTTTCGTGGTCTGTTTCCACCCTCGAGACAGAAAAGGCGCACCGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGtt                                                   <  1:2667008/149‑1 (MQ=255)

                                                                                                   ttGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGAAACCGTTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGtt                                                   <  2:1172028/149‑1 (MQ=255)

                                                                                                   ttGTTTTCGATGTCGGTTTCCACCCTCGAGTCCGAAAATGCGCAACCGGTGGCGCAGACTCAAACCAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGtt                                                   <  2:4114257/149‑1 (MQ=255)

                                                                                                      ttttCGATGTCTTTTTCCACCCTCGAGTAATAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGt                                                <  2:306169/149‑1 (MQ=255)

                                                                                                       tttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCggt                                               >  2:1334444/1‑147 (MQ=255)

                                                                                                       tttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAAAAACGAACTGATTTAACGTCTTGAAGATCGTCCGCCGCGTCCTCAAACCCTGTTTTCCGCCTGTCAGCATCAGCTGGCGATGTTCGtt                                               >  1:2310690/1‑149 (MQ=255)

                                                                                                         gggttgtgtgTTCCCACCCTCGATTCACAAACGGCGCACCGGGTCGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGc                                             <  1:1166192/145‑1 (MQ=255)

                                                                                                           gATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCgg                                           <  2:1852317/149‑1 (MQ=255)

                                                                                                                cTGTTCCCCCCCTCGAGACAGAAATGGCGCACCGGGTGCCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATc                                      <  1:3464500/149‑1 (MQ=255)

                                                                                                                  ttttCCCCCCTCGAGTCCGAAAATGCGCACCGGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCAc                                    <  1:3667753/148‑1 (MQ=255)

                                                                                                                   tttCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACg                                   >  2:433804/1‑149 (MQ=255)

                                                                                                                    ttCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGc                                  <  2:2156668/149‑1 (MQ=255)

                                                                                                                    ttCCACCCTCGAGCCAGAAAAGGCGCAACCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGc                                  <  2:2156699/149‑1 (MQ=255)

                                                                                                                    taccccccTCGAGTCACAAAATGCGCACCGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGc                                  <  1:1619909/144‑1 (MQ=255)

                                                                                                                     accACCCTCCAGACAGAAAATGCGCACCGGGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGcc                                 <  1:911499/148‑1 (MQ=255)

                                                                                                                      ccACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCa                                <  2:1558946/149‑1 (MQ=255)

                                                                                                                        ccccTCGAGTCAGAAAAGGCGCACGGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAgc                              <  1:1486145/148‑1 (MQ=255)

                                                                                                                          ccTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAgcgc                            >  2:3920777/1‑149 (MQ=255)

                                                                                                                            tCGAGTCACAAAAGGCGCCACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                          <  2:3798395/149‑1 (MQ=255)

                                                                                                                            tCGAGACACAAAAGGCGCACCCGGTGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                          <  1:1379226/149‑1 (MQ=255)

                                                                                                                            gcGAGTCAGAAAATGCGCCACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                          <  2:1757047/148‑1 (MQ=255)

                                                                                                                               aGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTa                       >  2:3940574/1‑149 (MQ=255)

                                                                                                                                 tCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAAt                     <  2:3978876/149‑1 (MQ=255)

                                                                                                                                 tCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGGCCGCCGCATCCGCAAACCCTGGTTGCCGCCTGTCAGCATCTGCTGGCCAGGTTCGTTGCGGTGATCACGACCGCGCTATTAAt                     >  2:2262966/1‑149 (MQ=255)

                                                                                                                                    gAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACAGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTTCTGGCGATGTTCGTTGCGGTGATCACGCCCGCGCGAGTAAACTg                  >  2:1443602/1‑149 (MQ=255)

                                                                                                                                      aattGCGCACCGGGTGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGcc                <  1:3170170/146‑1 (MQ=255)

                                                                                                                                      aaaTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGcc                <  2:3453812/149‑1 (MQ=255)

                                                                                                                                       aaTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGGTGCGGTGATCACGCCAGCGCTATTAATCTGCCa               >  2:3555601/1‑149 (MQ=255)

                                                                                                                                        aTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAg              <  2:2252627/149‑1 (MQ=255)

                                                                                                                                        aTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAg              >  1:1222643/1‑149 (MQ=255)

                                                                                                                                            gccaCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGgcgc          <  2:920197/146‑1 (MQ=255)

                                                                                                                                                 cGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGGt     <  2:2413900/149‑1 (MQ=255)

                                                                                                                                                   gTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGGttt   >  2:697062/1‑149 (MQ=255)

AAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGGTTTA  >  CP009273/3822197‑3822493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`