| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,890,151 | G→T | 38.8% | A6A (GCG→GCT) | yieH → | phosphoenolpyruvate and 6‑phosphogluconate phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,890,151 | 0 | G | T | 38.8% | 301.3 / 245.1 | 247 | A6A (GCG→GCT) | yieH | phosphoenolpyruvate and 6‑phosphogluconate phosphatase |
| Reads supporting (aligned to +/- strand): ref base G (58/93); new base T (57/39); total (115/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.65e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.24e-01 | |||||||||||
Only 100 of 251 total aligned reads displayed.
GCTATCGTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAATTATCG > CP009273/3890003‑3890299 | gCTATCGTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCg > 1:1938978/1‑149 (MQ=255) cTATCGTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCgg < 2:2469872/149‑1 (MQ=255) tATCGTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAATCGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGt > 2:3567432/1‑149 (MQ=255) aTCGTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTa < 1:1210201/149‑1 (MQ=255) tCGTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTAt > 2:1773429/1‑149 (MQ=255) tCGTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTAt > 2:3815176/1‑149 (MQ=255) gTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTAttt > 2:406955/1‑149 (MQ=255) gTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTAttt < 1:1984970/149‑1 (MQ=255) gTATACCAAAATGCGACAATAGGCGCGGTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTAttt > 2:3742406/1‑149 (MQ=255) ataCCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTAttttt < 2:3952755/149‑1 (MQ=255) taCCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTc > 2:804293/1‑149 (MQ=255) ccAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGa < 2:2831744/149‑1 (MQ=255) cAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGAc < 2:1203728/149‑1 (MQ=255) cAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGAc < 1:2749594/149‑1 (MQ=255) cAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGAc < 2:1894849/149‑1 (MQ=255) cAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGAc < 1:1466911/149‑1 (MQ=255) aTGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCg > 2:2890517/1‑149 (MQ=255) cAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTa < 2:919817/149‑1 (MQ=255) aTAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATAAGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGTAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACg > 2:2643625/1‑149 (MQ=255) tAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGc < 1:1321837/149‑1 (MQ=255) aGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCt > 2:4017112/1‑149 (MQ=255) ggCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTg > 2:3233783/1‑149 (MQ=255) cgcgTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGt < 1:442740/149‑1 (MQ=255) gcgTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTc < 1:2444831/149‑1 (MQ=255) tttGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGAc > 1:368847/1‑149 (MQ=255) tttGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGAc > 1:3810391/1‑149 (MQ=255) ttGTGATAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAACTCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACa < 2:1017900/149‑1 (MQ=255) ttGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACa > 1:3880552/1‑149 (MQ=255) ttGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACa < 2:1957653/149‑1 (MQ=255) gagagaCTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGa > 2:3887307/1‑149 (MQ=255) agagaCTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGaa < 1:1269535/149‑1 (MQ=255) gagaCTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAg > 1:645134/1‑149 (MQ=255) gaCTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTc > 1:3977017/1‑149 (MQ=255) aCTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCa > 1:985248/1‑149 (MQ=255) cTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCAt < 2:3014717/149‑1 (MQ=255) ttttttATTGGATTTACTTATACTTCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCAtt < 1:3603182/149‑1 (MQ=255) ttttttATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCAtt > 1:2354048/1‑149 (MQ=255) aTTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGctct < 1:3548444/149‑1 (MQ=255) aTTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGctct < 1:1677814/149‑1 (MQ=255) ttGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCtctc > 1:2189687/1‑149 (MQ=255) tGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTcg > 2:348048/1‑149 (MQ=255) gATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTcgcg > 1:1484609/1‑149 (MQ=255) tttACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCa > 1:4085599/1‑149 (MQ=255) ttACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCat < 2:2823159/149‑1 (MQ=255) tACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCata < 2:2053449/149‑1 (MQ=255) aCTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCatat > 2:2160337/1‑149 (MQ=255) ataCGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTaa > 1:1314788/1‑149 (MQ=255) aCGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACg < 2:11836/149‑1 (MQ=255) ggCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGAt < 1:2514810/149‑1 (MQ=255) ggCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGAt < 1:3374517/149‑1 (MQ=255) gCAACGATTGCGTTGCGCAAATCGGCTCTACGTAAACGTTACTCTGATTAAAAAGGAAAGGCGTGTCCCGGCTAGACGCTGTCTTTTTCGACTGCGCCGGTACGCTGGTCGAGAGTGTAGTCATGTGCTCTCGCGCATCTGTAACGATg > 2:2376975/1‑149 (MQ=255) gCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCCTATGTAACGATg > 2:2377036/1‑149 (MQ=255) gCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATg < 2:1758928/149‑1 (MQ=255) gCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATg > 2:2800089/1‑149 (MQ=255) cAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGt < 1:591611/149‑1 (MQ=255) cAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGt < 1:592359/149‑1 (MQ=255) cGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTc < 1:471766/149‑1 (MQ=255) ttgcgttgcgCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAgg < 2:1350267/149‑1 (MQ=255) cgttgcgCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAAt < 1:4093846/149‑1 (MQ=255) gttgcgCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAAtt < 1:2001275/149‑1 (MQ=255) ttgcgCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAAttt > 2:2944906/1‑149 (MQ=255) gcAACTCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTa < 2:3333707/149‑1 (MQ=255) aaaTCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTAtt < 1:2227171/149‑1 (MQ=255) aaTCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACCGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTa < 2:3166938/149‑1 (MQ=255) aaTCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTa < 2:3630205/149‑1 (MQ=255) aTCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTAc < 2:3145391/149‑1 (MQ=255) ataagAAAAAGTTAAAGTGATTAAAAAGGAAAGGCATGTACCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGAt < 1:764729/145‑1 (MQ=255) tACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATc > 1:1586840/1‑149 (MQ=255) cGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCt > 1:1883933/1‑149 (MQ=255) cGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCt > 1:3655266/1‑149 (MQ=255) gAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTg < 1:1834146/149‑1 (MQ=255) aaCGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAag > 1:3410179/1‑149 (MQ=255) aCGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAaga < 1:2377245/149‑1 (MQ=255) cGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAagag > 2:2270532/1‑149 (MQ=255) ttAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGt < 1:3899983/149‑1 (MQ=255) ttAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGt < 2:1982733/149‑1 (MQ=255) gATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCaaa > 1:1629000/1‑149 (MQ=255) aTTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAAc < 1:3291431/149‑1 (MQ=255) aTTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAAc > 1:1428928/1‑149 (MQ=255) aTTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAAc < 2:1938699/149‑1 (MQ=255) ttAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACg > 2:782540/1‑149 (MQ=255) aggaaaggCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCaa > 1:3189062/1‑149 (MQ=255) aggaaaggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCaa > 2:2427924/1‑149 (MQ=255) ggaaaggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCaaa > 1:1143628/1‑149 (MQ=255) ggaaaggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCaaa < 2:1446230/149‑1 (MQ=255) gaaaggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAg < 1:3196751/149‑1 (MQ=255) gaaaggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAg < 1:1048601/149‑1 (MQ=255) aaggCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGgt < 1:927379/149‑1 (MQ=255) aggCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGgtg < 1:3335562/149‑1 (MQ=255) aggCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGgtg > 2:44144/1‑149 (MQ=255) aggCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGgtg > 2:44421/1‑149 (MQ=255) ggCATGTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGgtgt > 1:4010849/1‑149 (MQ=255) tGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTaaaa < 2:2032577/149‑1 (MQ=255) gTCCCGGATAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAAc < 1:2914689/149‑1 (MQ=255) cGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGCTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTa < 1:3847263/149‑1 (MQ=255) aTAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGa < 2:1605168/149‑1 (MQ=255) aTAGAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGa < 2:1605062/149‑1 (MQ=255) gAAGCTGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAAt > 1:3213206/1‑149 (MQ=255) gAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAAt < 2:592980/149‑1 (MQ=255) ggTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAATTATCg > 2:471943/1‑149 (MQ=255) | GCTATCGTATACCAAAATGCGACAATAGGCGCGTTTGTGAGAGACTTTTTTATTGGATTTACTTATACGGCAACGATTGCGTTGCGCAAATCGGCTCTACGAAAACGTTAAACTGATTAAAAAGGAAAGGCATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAATTATCG > CP009273/3890003‑3890299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |