| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,927,972 | G→T | 100% | E279* (GAA→TAA) | rbsA → | fused D‑ribose transporter subunits of ABC superfamily: ATP‑binding components |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,927,972 | 0 | G | T | 99.3% | 841.2 / ‑2.2 | 268 | E279* (GAA→TAA) | rbsA | fused D‑ribose transporter subunits of ABC superfamily: ATP‑binding components |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base T (136/130); total (138/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.01e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 268 total aligned reads displayed.
GATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGCCTGGCAAA > CP009273/3927828‑3928117 | gATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAAt > 1:307461/1‑149 (MQ=255) ttCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTc > 2:2016471/1‑149 (MQ=255) cGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCtt < 1:398154/149‑1 (MQ=255) cGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCtt < 2:2869215/149‑1 (MQ=255) cGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTAAGCAAAGGCTAAATTCtt > 1:404156/1‑149 (MQ=255) gCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTg < 2:2940908/149‑1 (MQ=255) aTTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGt > 2:1315594/1‑149 (MQ=255) ttGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGtc < 2:1951851/149‑1 (MQ=255) agaTGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTctct < 2:1833950/149‑1 (MQ=255) agaTGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTctct < 2:335479/149‑1 (MQ=255) tgatgGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGt < 1:2030364/149‑1 (MQ=255) tgatgGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGt > 2:2451489/1‑149 (MQ=255) gatgGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGtt < 2:1692101/149‑1 (MQ=255) atgGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAACTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGttt < 2:1317973/149‑1 (MQ=255) tggtggGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTg > 2:523223/1‑149 (MQ=255) gtggGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGAt > 2:1153403/1‑149 (MQ=255) tggGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATg < 2:353011/149‑1 (MQ=255) tggGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATg > 2:3308676/1‑149 (MQ=255) ggTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAGAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATggg > 2:3997435/1‑149 (MQ=255) gTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGgc < 2:2880023/149‑1 (MQ=255) gCACGCTGGAAGATCACTATCCGCACCTGGTCCAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTGTACTTTACGCAAAGGCTTAATTCTTGGCGTCTCTGGTTTGATGGGCGCa < 2:3511664/149‑1 (MQ=255) aaGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAgg < 1:3446279/149‑1 (MQ=255) aaGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAgg < 1:3055832/149‑1 (MQ=255) aGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGt > 1:868136/1‑149 (MQ=255) gCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAACTTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTc < 2:2467438/149‑1 (MQ=255) cTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCg > 1:1678332/1‑149 (MQ=255) tGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGt < 2:3817961/149‑1 (MQ=255) gAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTAc < 1:1802147/149‑1 (MQ=255) gAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTAc > 1:359280/1‑149 (MQ=255) aaGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGGGTCTCTGGTTTGATGGGCGCAGGTCGTAcc < 2:2563000/149‑1 (MQ=255) aTCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGaa < 1:1408533/149‑1 (MQ=255) tCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAAc > 2:141987/1‑149 (MQ=255) tCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAAc < 2:1212458/149‑1 (MQ=255) aaTATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATTTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACtg > 1:1203631/1‑149 (MQ=255) aaTATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACtg > 2:182546/1‑149 (MQ=255) aaTATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACtg > 1:1592684/1‑149 (MQ=255) tCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACtgatga > 1:3129541/1‑149 (MQ=255) ccGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGaa < 2:586996/149‑1 (MQ=255) gCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAg < 2:91807/149‑1 (MQ=255) gCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAg < 2:2847034/149‑1 (MQ=255) aCCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTg > 1:2843687/1‑149 (MQ=255) ggACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGctct < 1:316102/149‑1 (MQ=255) gACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTa > 1:1082286/1‑149 (MQ=255) cAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACg > 2:561209/1‑149 (MQ=255) aaaGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACgg > 2:1458973/1‑149 (MQ=255) aaGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGgc > 2:1615135/1‑149 (MQ=255) aGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGgcg > 1:1009239/1‑149 (MQ=255) aGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGgcg > 1:1807541/1‑149 (MQ=255) aGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTAATTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCCAACTGAAGAAACTGATAGACGgcg > 1:2785444/1‑149 (MQ=255) gcgcCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGgcgc > 2:2336383/1‑149 (MQ=255) gcCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCAc < 2:3389779/149‑1 (MQ=255) gcCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCAc < 1:2324230/149‑1 (MQ=255) ccGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACt < 1:3775455/149‑1 (MQ=255) cGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTa > 1:2150773/1‑149 (MQ=255) gggAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTAc > 2:2784236/1‑149 (MQ=255) tatCCGCCTGAAAGTCGATAATCTCTGCGTACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCa > 1:2939886/1‑149 (MQ=255) tatCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCa < 1:2733587/149‑1 (MQ=255) tGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGt > 1:2264058/1‑149 (MQ=255) gAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGtt < 1:523223/149‑1 (MQ=255) gAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCCACGGCGCACTACCGCGCACCAGCGGtt < 1:2527892/149‑1 (MQ=255) aaGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTAc < 2:1193947/149‑1 (MQ=255) aaGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTAc > 1:2678526/1‑149 (MQ=255) attCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACg > 2:3621997/3‑149 (MQ=255) gTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGt > 2:1043111/1‑149 (MQ=255) gATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCAc > 1:1281027/1‑149 (MQ=255) gATAATCTCTGCGGACCTGGCGATAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCAc < 2:1722156/149‑1 (MQ=255) aTAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTAAGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATTGGCGCAGGTCGTACCGAACTGATGAAATTGCTCTAAGGCGCACTAACGCGCACCAGCGGTTACGTCAcc > 1:3806339/1‑149 (MQ=255) tAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCAccc < 2:1514235/149‑1 (MQ=255) aTCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTTAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTg < 1:3730529/149‑1 (MQ=255) aTCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTg > 2:2818772/1‑149 (MQ=255) aTCTCTGCGGACCTGGCGTTAACGATGTATCATTTAATTTACTCAAACGCTAAATTCTTTGCGTCTCTGTTTTGATGGGCGCAGGTCGTACCGAAATGATGAAAGTGCTCTAAGGCGCACTAACCCGCACCAGCGGTTACGTCAcccag > 1:3821623/1‑147 (MQ=255) gCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATggg > 1:1851157/1‑149 (MQ=255) ggACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATTAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGcc > 1:4010860/1‑148 (MQ=255) ggACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCa < 1:3333522/149‑1 (MQ=255) gACCTGGCGTTAACGATGTCTATTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAATGCTCTACGGCGCACTACCCCGCACCAGCGGTTACGTCACCCTGGATGGGCAt > 1:778099/1‑149 (MQ=255) aCCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATg > 2:2180005/1‑149 (MQ=255) ccTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGa < 1:2787631/149‑1 (MQ=255) cTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGaa < 2:1452715/149‑1 (MQ=255) ggCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGt > 2:3866863/1‑149 (MQ=255) cGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCg < 1:1615135/149‑1 (MQ=255) gATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCg > 2:2288223/1‑149 (MQ=255) aTGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGt < 2:2995138/149‑1 (MQ=255) aTGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGt < 2:1980703/149‑1 (MQ=255) tGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGtt > 1:358046/1‑149 (MQ=255) tGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGtt < 2:378296/149‑1 (MQ=255) tGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGtt < 2:378312/149‑1 (MQ=255) tctTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCAcc > 2:3467462/1‑149 (MQ=255) tttactttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCa < 2:2028641/149‑1 (MQ=255) ttactttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAg < 1:751116/149‑1 (MQ=255) actttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGa < 1:3174525/149‑1 (MQ=255) ctttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGAt < 1:3005231/149‑1 (MQ=255) ctttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGAt > 1:4073606/1‑149 (MQ=255) ctttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGAt < 1:1315594/149‑1 (MQ=255) tttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATg > 1:935597/1‑149 (MQ=255) tttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATg > 1:306083/1‑149 (MQ=255) ttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATgg < 2:3035774/149‑1 (MQ=255) cAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGCCTgg < 2:886970/149‑1 (MQ=255) aaaGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGCCTGGc > 2:2696981/1‑149 (MQ=255) aaaGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGCCTGGc > 1:3322715/1‑149 (MQ=255) aaGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGCCTGGCa > 1:2773674/1‑149 (MQ=255) | GATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGCCTGGCAAA > CP009273/3927828‑3928117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |