| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,045,386 | G→T | 16.6% | intergenic (+170/‑19) | yihI → / → hemN | activator of Der GTPase/coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,045,386 | 0 | G | T | 16.6% | 734.5 / 87.1 | 251 | intergenic (+170/‑19) | yihI/hemN | activator of Der GTPase/coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent |
| Reads supporting (aligned to +/- strand): ref base G (95/114); new base T (25/17); total (120/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 252 total aligned reads displayed.
CGTTCTGCTGATAACCCTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCGGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGTTTTTACAAG > CP009273/4045240‑4045534 | cGTTCTGCTGATAACCCTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGcc > 2:3266813/1‑149 (MQ=255) gTTCTGCTGATAACCCTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCa > 2:1836771/1‑149 (MQ=255) ttCTGCTGATAACCCTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCAt < 2:3074143/149‑1 (MQ=255) ctgATAACCCTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGaa < 1:4041339/149‑1 (MQ=255) tgATAACCCTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAg > 1:2606373/1‑149 (MQ=255) gATAACCCTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAgg < 1:3801717/149‑1 (MQ=255) tAACCCTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAg > 1:188137/1‑149 (MQ=255) cccTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGa > 2:2055879/1‑149 (MQ=255) cccTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCAGCGGAAGGAGTGa > 2:2055947/1‑149 (MQ=255) cTTCCGGTTATATTTTATCTGGTGTGTTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAACGGGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGc < 1:2476188/149‑1 (MQ=255) cTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGc > 1:3103502/1‑149 (MQ=255) ttCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCa > 1:1254278/1‑149 (MQ=255) ggTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTc < 1:966562/149‑1 (MQ=255) ttATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTg > 2:3950261/1‑149 (MQ=255) ttATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTg > 2:1826781/1‑149 (MQ=255) tataTGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGt > 1:1467893/1‑149 (MQ=255) tatGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTAc > 2:2556566/1‑149 (MQ=255) atGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACa > 2:322060/1‑149 (MQ=255) atGTTATCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACa < 2:240651/149‑1 (MQ=255) tgtGGTGTGGTTATTCGTTAAACTACAGGTTTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCTAAACGGTCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAAt < 1:1935179/147‑1 (MQ=255) tCTGGTGTGGTTATTCGTTAAACTACCGCTGGTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAAt < 2:1069733/149‑1 (MQ=255) tCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAAt < 1:274966/149‑1 (MQ=255) tCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAAt < 1:2506709/149‑1 (MQ=255) tCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAAt < 2:557369/149‑1 (MQ=255) tCTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAAt > 2:2504969/1‑149 (MQ=255) cTGGTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATc < 2:1454829/149‑1 (MQ=255) ggTGTGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGa < 2:1874080/149‑1 (MQ=255) gtgtGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGAc < 2:654567/149‑1 (MQ=255) gtgtGGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGAc < 2:3813076/149‑1 (MQ=255) tgtgGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACt < 2:3902654/149‑1 (MQ=255) gtgGTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAGGGAGTGAGCATGTCTGTACAGCAAATCGACTg > 2:3622729/1‑149 (MQ=255) gTTATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGa > 1:1700706/1‑149 (MQ=255) ttATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGAt < 2:1275409/149‑1 (MQ=255) tATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATc < 1:2641031/149‑1 (MQ=255) tATTCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATc < 2:105217/149‑1 (MQ=255) ttCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTg < 2:78310/149‑1 (MQ=255) ttCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTg > 2:3615129/1‑149 (MQ=255) ttCGTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTg > 2:1566990/1‑149 (MQ=255) gTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGcc > 2:22735/1‑149 (MQ=255) gTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGcc < 2:3470596/149‑1 (MQ=255) gTTAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGcc > 1:1482141/1‑149 (MQ=255) ttAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGccc > 2:51032/1‑149 (MQ=255) tAAACTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGGACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACAGGGATCTGGCCCt > 2:2365027/1‑149 (MQ=255) aaaCTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTCCGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTg > 2:93283/1‑149 (MQ=255) aaCTACAGCGGTTGGCGCGGCGACAAACGTGGCGGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGa < 1:697565/149‑1 (MQ=255) aCTACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTAATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGCGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGAt > 2:581488/1‑149 (MQ=255) tACAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATcc > 2:3807326/1‑149 (MQ=255) aCAGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCa < 2:3249610/149‑1 (MQ=255) aGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGa > 2:3274076/1‑149 (MQ=255) aGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGa > 2:3756154/1‑149 (MQ=255) aGCTGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGa > 2:1706670/1‑149 (MQ=255) ctgTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGaaa < 2:306753/147‑1 (MQ=255) ctgTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGaaa < 2:212397/147‑1 (MQ=255) gTTGTCGCGTCGACAAATGTGGCTGCGCATCCGGATGATGACCCGAAACGGGCATCCGCGGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGAATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAata < 2:3345748/149‑1 (MQ=255) tCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAAc < 1:3950261/149‑1 (MQ=255) cgcgGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACt < 1:874572/149‑1 (MQ=255) gcggcgACAAATGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTa < 1:2804176/149‑1 (MQ=255) gcgACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTc < 1:2970792/149‑1 (MQ=255) gcgACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTc < 1:1171140/149‑1 (MQ=255) gcgACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTc > 2:1198079/1‑149 (MQ=255) gcgACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTc < 1:3046306/149‑1 (MQ=255) cAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAGATATAACTATTCCggg > 1:2540227/1‑149 (MQ=255) aaaaGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGc < 2:3811644/149‑1 (MQ=255) aaaaGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGc > 2:520902/1‑149 (MQ=255) tGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGa < 2:2702244/149‑1 (MQ=255) tGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACTGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGa < 1:324129/149‑1 (MQ=255) tGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGa < 1:2398078/149‑1 (MQ=255) gCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATa < 1:3489129/149‑1 (MQ=255) tGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATaca < 1:3071931/149‑1 (MQ=255) tGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATaca < 1:2346529/149‑1 (MQ=255) gcAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCt < 1:3393172/149‑1 (MQ=255) tgatgaCCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGa > 1:618294/1‑149 (MQ=255) gatgaCCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGAc < 1:3750510/149‑1 (MQ=255) gatgaCCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGAc > 2:3115791/1‑149 (MQ=255) tgaCCCGAAACGGGAATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGTAAGTAGTGAGCTTGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACcg < 1:2762746/149‑1 (MQ=255) ccGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCt < 1:785431/149‑1 (MQ=255) gAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTgg > 2:277904/1‑149 (MQ=255) aaCGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAg > 1:3437556/1‑149 (MQ=255) cATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCa < 1:3040392/149‑1 (MQ=255) cgccgGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCagaag > 2:2671348/1‑149 (MQ=255) gccgGTACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCagaaga > 2:3530856/1‑149 (MQ=255) cgGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACt < 1:2721801/149‑1 (MQ=255) gTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTc < 2:2452664/149‑1 (MQ=255) tACGCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCg < 1:4079487/149‑1 (MQ=255) gCCGTAGCCGCCAGAGACTCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCg < 2:2760234/149‑1 (MQ=255) gTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAAc > 2:203121/1‑149 (MQ=255) tAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACa < 1:3036971/149‑1 (MQ=255) aGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAg < 1:1834833/149‑1 (MQ=255) aGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAg < 2:2521408/149‑1 (MQ=255) aGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAg < 1:1835369/149‑1 (MQ=255) gccgccAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAgg > 1:979803/1‑149 (MQ=255) agagACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGtttt < 1:2280475/149‑1 (MQ=255) agagACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGtttt < 1:2872498/149‑1 (MQ=255) gagaCGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGttttt > 2:2991555/1‑149 (MQ=255) gaCGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGTTTTTAc > 2:1926656/1‑149 (MQ=255) aCGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGTTTTTACa > 1:3837301/1‑149 (MQ=255) cGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGTTTTTACaa < 1:3615129/149‑1 (MQ=255) cGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGTTTTTACaa < 1:3348992/149‑1 (MQ=255) cGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGTTTTTACaa < 1:1566990/149‑1 (MQ=255) gCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGTTTTTACAAg < 2:110793/149‑1 (MQ=255) | CGTTCTGCTGATAACCCTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACTACAGCGGTTGTCGCGGCGACAAAAGTGGCTGCGCAACCGGCTGATGACCCGAAACGGGCATCCGCCGGTACGCCGTAGCCGCCAGAGACGCCATCGGAAGGAGTGAGCATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGTTTTTACAAG > CP009273/4045240‑4045534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |