Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 4,124,384 | C→A | 100% | H208N (CAT→AAT) | katG → | catalase‑peroxidase HPI, heme b‑containing |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 4,124,384 | 0 | C | A | 99.1% | 692.2 / ‑2.0 | 213 | H208N (CAT→AAT) | katG | catalase‑peroxidase HPI, heme b‑containing |
Reads supporting (aligned to +/- strand): ref base C (0/2); new base A (109/102); total (109/104) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.37e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
Only 100 of 213 total aligned reads displayed.
GGGCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTCATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAACGA > CP009273/4124238‑4124529 | gggCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGCTGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAAt > 2:2452981/1‑149 (MQ=255) gggCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAAt < 1:1428776/149‑1 (MQ=255) gggCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAAt < 2:1072352/149‑1 (MQ=255) gggCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAAt > 1:3978858/1‑149 (MQ=255) ggCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCTTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATc < 2:1447243/149‑1 (MQ=255) ggCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATc < 1:3609295/149‑1 (MQ=255) ggCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATc > 2:2963562/1‑149 (MQ=255) ggCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATc < 2:3495159/149‑1 (MQ=255) ggCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATc < 1:958938/149‑1 (MQ=255) ccGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCg < 2:1020027/149‑1 (MQ=255) cGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCgg > 2:2245632/1‑149 (MQ=255) aCCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGaa > 1:1433078/1‑149 (MQ=255) cTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAgc < 2:63349/149‑1 (MQ=255) gTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAgcgc > 1:748090/1‑149 (MQ=255) gTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAgcgc > 1:3666809/1‑149 (MQ=255) gTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAgcgc < 2:704074/149‑1 (MQ=255) tttATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCt > 1:3442620/1‑149 (MQ=255) tttATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCt > 1:1125217/1‑149 (MQ=255) aTCCTCGCGGGTACCGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGc > 2:2522461/1‑149 (MQ=255) tCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCg > 2:3895254/1‑149 (MQ=255) tCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGaaa < 2:225118/149‑1 (MQ=255) tCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGaaa < 2:3786034/149‑1 (MQ=255) gggTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCAc < 1:3935969/149‑1 (MQ=255) tAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGc < 1:1702394/149‑1 (MQ=255) tAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGc < 1:445075/149‑1 (MQ=255) tGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGt < 2:2413414/149‑1 (MQ=255) gcTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCaa > 2:2571710/1‑149 (MQ=255) gcTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCaa > 1:464802/1‑149 (MQ=255) cTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAAc < 2:3548289/149‑1 (MQ=255) caCTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGAt < 2:3853499/148‑1 (MQ=255) aaCTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGAt > 2:798744/1‑149 (MQ=255) cTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATgg > 1:1537883/1‑149 (MQ=255) gCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTg > 2:2015535/1‑149 (MQ=255) ttCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGAt > 1:87934/1‑149 (MQ=255) tCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGAtt < 1:3673225/149‑1 (MQ=255) tCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGAGAAAGCACCGCTGTGTGCAACCGAGATGGGTCTGAtt > 2:2420306/1‑149 (MQ=255) cGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTa < 2:3213392/149‑1 (MQ=255) cTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTa > 2:2104667/1‑149 (MQ=255) ttCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTaa > 2:219094/1‑149 (MQ=255) ttCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTaa > 2:1627911/1‑149 (MQ=255) tCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAAc < 1:661755/149‑1 (MQ=255) ggTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAAccc < 1:3774863/149‑1 (MQ=255) ggTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAAccc < 2:1536937/149‑1 (MQ=255) ggTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAAccc < 2:3585384/149‑1 (MQ=255) gTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCg > 1:1188557/1‑149 (MQ=255) ggTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAgg < 1:3183922/149‑1 (MQ=255) ggTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAgg < 1:1850216/149‑1 (MQ=255) cGGTCGTGAATACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCgg > 1:3570334/1‑149 (MQ=255) cGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCgg > 1:7545/1‑149 (MQ=255) gTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGAt < 2:2325996/149‑1 (MQ=255) tGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATcaca > 2:3620942/1‑149 (MQ=255) tGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATcaca > 2:1207469/1‑149 (MQ=255) aaGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAgc > 1:3408956/1‑149 (MQ=255) cGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAgcggcg < 2:3258778/149‑1 (MQ=255) cGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAgcggcg < 2:3258887/149‑1 (MQ=255) ggAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGc > 1:1827436/1‑149 (MQ=255) gAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCt < 1:2828957/149‑1 (MQ=255) aCCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCttt > 1:3998073/1‑149 (MQ=255) ccGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTc < 2:1228626/149‑1 (MQ=255) ccGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTc < 1:3083568/149‑1 (MQ=255) gATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGc > 1:1450858/1‑149 (MQ=255) aTCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCg > 2:2063580/1‑149 (MQ=255) ggATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGgcag > 2:2389670/1‑149 (MQ=255) gATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGgcagc > 1:2835810/1‑149 (MQ=255) aTGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGgcagca > 1:1605633/1‑149 (MQ=255) tGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGcagcag > 2:421183/1‑149 (MQ=255) gTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCTAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCagcagc < 2:105690/149‑1 (MQ=255) aaCTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTAt < 1:1088658/149‑1 (MQ=255) aCTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATc < 1:2122029/149‑1 (MQ=255) aCTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATc < 2:1603216/149‑1 (MQ=255) aCTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATc < 1:43335/149‑1 (MQ=255) aCTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATc < 1:1705072/149‑1 (MQ=255) tGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCcg > 1:2357798/1‑149 (MQ=255) atgaAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGAcc > 2:1587904/1‑149 (MQ=255) tgaAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCt < 1:3674794/149‑1 (MQ=255) tgaAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCt < 2:1461936/149‑1 (MQ=255) aaaaaGCCTGGCTGACTCACCGTCATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTc < 1:1125933/149‑1 (MQ=255) aaaaaGCCTGGCTGACTCACCGTCATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTc < 1:1812397/149‑1 (MQ=255) aaaGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCgg > 2:2689253/1‑149 (MQ=255) aaaGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCgg > 1:2323011/1‑149 (MQ=255) aGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCa > 1:2699266/1‑149 (MQ=255) gCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCaa < 2:2872753/149‑1 (MQ=255) cTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACa > 2:1034651/1‑149 (MQ=255) gCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATgg > 1:2398348/1‑149 (MQ=255) cTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAAATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATggg < 1:2522461/149‑1 (MQ=255) gACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCa < 2:2792306/149‑1 (MQ=255) gACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCa > 2:3102197/1‑149 (MQ=255) gACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCa > 2:545031/1‑149 (MQ=255) aCTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCAt < 1:1884079/149‑1 (MQ=255) aCTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCAt < 1:1929794/149‑1 (MQ=255) aCTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCAt > 1:3279462/1‑149 (MQ=255) aCTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCAt < 1:218450/149‑1 (MQ=255) cTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATg > 1:1470024/1‑149 (MQ=255) tCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGa > 1:3440166/1‑149 (MQ=255) tCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGa > 2:3959997/1‑149 (MQ=255) cACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGaa < 2:4004704/149‑1 (MQ=255) cACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGaa < 2:4004615/149‑1 (MQ=255) cACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGaa < 1:2249494/149‑1 (MQ=255) aCCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAac < 1:798446/149‑1 (MQ=255) aCCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAac > 1:1959928/1‑149 (MQ=255) | GGGCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTCATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAACGA > CP009273/4124238‑4124529 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |