| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,452,243 | G→T | 5.1% | R79S (CGT→AGT) | nrdD ← | anaerobic ribonucleoside‑triphosphate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,452,243 | 0 | G | T | 5.1% | 786.9 / 11.8 | 212 | R79S (CGT→AGT) | nrdD | anaerobic ribonucleoside‑triphosphate reductase |
| Reads supporting (aligned to +/- strand): ref base G (90/110); new base T (4/7); total (95/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
Only 100 of 217 total aligned reads displayed.
TGGGTTGGAATCACCTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTCCGCTGCT > CP009273/4452095‑4452391 | tGGGTTGGAATCACCTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACACGATGTAAGCACg > 2:3111837/1‑149 (MQ=255) gggTTGGAATCACCTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGa < 1:2393960/149‑1 (MQ=255) ttGGAATCACCTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGcc > 2:49249/1‑149 (MQ=255) gAATCACCTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAgt > 2:927090/1‑149 (MQ=255) gAATCACCTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAgt < 2:3835267/149‑1 (MQ=255) gAATCACCTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAgt < 2:3835626/149‑1 (MQ=255) aTCACCTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAgttg < 1:3919309/149‑1 (MQ=255) aTCACCTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAgttg > 2:3317899/1‑149 (MQ=255) aCCTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGttgttt < 2:2375650/149‑1 (MQ=255) aCCTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCAAGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGttgttt > 2:2263168/1‑149 (MQ=255) ccTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGttgtttg < 2:3942336/149‑1 (MQ=255) ttGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTa > 2:3594672/1‑149 (MQ=255) gTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACAACCGATCTCCTGGTTCAGGCGACCGCGTTTTTCAAGTTCAATGTCGCGATCGTGACGGTAATAGATGTAAGCAAGATCCAGATGTTTGTATGGaa > 2:3280093/1‑148 (MQ=255) tttGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACTAGCCAGTTGTTTGTATTGACCTg > 2:2701879/1‑149 (MQ=255) tttGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGGTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACTAGCCAGTTGTTTGTATGGACCTg > 2:638753/1‑149 (MQ=255) tttGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCACGACCAGACCACGGATCTCCTGGTTAAGGCGAACGCGTTTTTCAAGTTCAATGTCGCGATCGTGACCGTACACGATGTAAGCACGAGCCAGTTGTTTGTATTGACCTg > 2:3185071/1‑149 (MQ=255) ttgttgGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGa < 2:154790/149‑1 (MQ=255) ttgttgGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGGTTGTATGGACCTGa > 2:2403345/1‑149 (MQ=255) ttgGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACAt < 1:3874092/149‑1 (MQ=255) ggCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCa < 2:711443/149‑1 (MQ=255) gCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAg > 2:3694064/1‑149 (MQ=255) ttttCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACCTCAGCTg > 2:4033676/1‑149 (MQ=255) ttttCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTg < 2:2955501/149‑1 (MQ=255) gTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGAtttt < 1:2929089/149‑1 (MQ=255) gTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGAtttt > 2:2442015/1‑149 (MQ=255) gAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCaa < 2:3652126/149‑1 (MQ=255) cGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCgg < 2:337636/149‑1 (MQ=255) gTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGAtctc < 1:4003743/149‑1 (MQ=255) gTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGAtctc > 1:927194/1‑149 (MQ=255) tCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCa < 1:776757/149‑1 (MQ=255) cTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCAt < 1:1089287/149‑1 (MQ=255) gCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTg < 1:720926/149‑1 (MQ=255) cGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGata < 2:814391/149‑1 (MQ=255) cGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGata < 1:3147809/149‑1 (MQ=255) accagaccaCGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATc > 2:3225294/1‑149 (MQ=255) ccagaccaCGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATcc < 1:2250483/149‑1 (MQ=255) ccagaccaCGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATcc < 1:2814543/149‑1 (MQ=255) cagaccaCGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCa < 1:2239691/149‑1 (MQ=255) agaccaCGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCAc < 2:3771020/149‑1 (MQ=255) gaccaCGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCAGATTTTCAACTGCGGTCTGGATCTCATTGATATCCAcc > 2:2550997/1‑149 (MQ=255) ccaCGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTg < 2:1134564/149‑1 (MQ=255) caCGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTgg > 2:832890/1‑149 (MQ=255) aCGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGt < 1:1702602/149‑1 (MQ=255) cGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGtt < 1:168914/149‑1 (MQ=255) ggATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTg < 2:1673706/149‑1 (MQ=255) gATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGc > 2:1816436/1‑149 (MQ=255) gATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGc > 2:3855138/1‑149 (MQ=255) gATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGc < 1:3644369/149‑1 (MQ=255) ccTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGccc < 1:738352/149‑1 (MQ=255) cTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCt > 2:2769259/1‑149 (MQ=255) cTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCt > 2:314005/1‑149 (MQ=255) ttCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCAt < 1:3065068/149‑1 (MQ=255) ttCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCAt < 1:1008023/149‑1 (MQ=255) aGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACTAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTg > 2:2660382/1‑149 (MQ=255) ggCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGc > 1:2810047/1‑149 (MQ=255) cGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTc > 1:3403905/1‑149 (MQ=255) gcgTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGa > 2:1306021/1‑149 (MQ=255) gcgTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGa > 2:202031/1‑149 (MQ=255) tttttCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACaa > 2:1161196/1‑149 (MQ=255) tttttCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACaa < 2:2175496/149‑1 (MQ=255) aCGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACACCCGCgg > 2:1898627/1‑149 (MQ=255) aCGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCgg > 1:3508204/1‑149 (MQ=255) ttCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCaa > 1:43171/1‑149 (MQ=255) cAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTTCTCGCTGACAACCGCGGCAACa < 1:3798114/149‑1 (MQ=255) aaTGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAg > 2:3036273/1‑149 (MQ=255) tGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTg < 1:1122287/149‑1 (MQ=255) gTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTgg > 2:955235/1‑149 (MQ=255) gTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTgg < 1:4010557/149‑1 (MQ=255) gTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTgg < 1:1972811/149‑1 (MQ=255) tCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGgc > 2:1310958/1‑149 (MQ=255) tCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGgc > 2:25333/1‑149 (MQ=255) gTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCaataat < 1:263857/149‑1 (MQ=255) gTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCaataat > 2:2353363/1‑149 (MQ=255) tGACGGTACTCGATGTAAGCACGGGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATc < 1:3694411/149‑1 (MQ=255) gACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCg > 1:1232515/1‑149 (MQ=255) aCGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCgg > 2:187677/1‑149 (MQ=255) ggTACTCGATGTAAGCACTAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGca < 1:2660729/149‑1 (MQ=255) gTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGcat < 1:2562918/149‑1 (MQ=255) aCTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGcatca < 1:3280093/149‑1 (MQ=255) cTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGcatcat > 2:1996042/1‑149 (MQ=255) aTGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACACCCGCGGCAACAGTGGCGCAATAATCGGCATCATCGAc > 2:1496741/1‑149 (MQ=255) aTGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGAc < 2:1007378/149‑1 (MQ=255) aTGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGAc < 1:3840354/149‑1 (MQ=255) aTGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGAc < 1:1159087/149‑1 (MQ=255) tGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACt < 2:445394/149‑1 (MQ=255) tGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACt < 1:1207069/149‑1 (MQ=255) tAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTAATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTc > 1:1583940/1‑149 (MQ=255) aaGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTcc < 1:3578778/149‑1 (MQ=255) aaGCACGAGCCAGTTGATTGTATGGACCTGACATCAGCTGATGTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTcc < 2:1117591/149‑1 (MQ=255) aGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTCCg > 1:2477797/1‑149 (MQ=255) gCACTAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTCCgc < 2:1187719/149‑1 (MQ=255) gCACGAGCCCGTTGTTTGTCTGGACCGGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATCATCGGCATCATCGACTTCCgc < 2:1586503/149‑1 (MQ=255) gCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTCCgc < 2:3866206/149‑1 (MQ=255) gCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTCCgc > 2:2672329/1‑149 (MQ=255) gCACGAGCCAGGTGTTTGGATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTCCgc < 2:3633449/149‑1 (MQ=255) aCGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTCCgctg > 1:1618996/1‑149 (MQ=255) aCGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTCCgctg > 1:1419627/1‑149 (MQ=255) gAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTCCgctgct < 1:3563558/149‑1 (MQ=255) gAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTCCgctgct < 1:2054325/149‑1 (MQ=255) gAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTCCgctgct > 2:3534090/1‑149 (MQ=255) | TGGGTTGGAATCACCTTGCTGTCTTTGTTGGCGTTTTCGTTGAGTAACGAGGCGTTGGTCTGCTCGACCAGACCACGGATCTCCTGGTTCAGGCGACCGCGTTTTTCACGTTCAATGTCGCGATCGTGACGGTACTCGATGTAAGCACGAGCCAGTTGTTTGTATGGACCTGACATCAGCTGATTTTCAACTGCGGTCTGGATCTCATTGATATCCACCTGGTTGCGGCCCTGCATCTGCTCGCTGACAACCGCGGCAACAGTGGCGCAATAATCGGCATCATCGACTTCCGCTGCT > CP009273/4452095‑4452391 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |