Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 647,234 | C→T | 94.6% | E27K (GAA→AAA) | citC ← | [citrate [pro‑3S]‑lyase] ligase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 647,234 | 0 | C | T | 94.6% | 716.9 / 24.3 | 224 | E27K (GAA→AAA) | citC | [citrate [pro‑3S]‑lyase] ligase |
Reads supporting (aligned to +/- strand): ref base C (4/8); new base T (106/105); total (110/114) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.75e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 |
Only 100 of 224 total aligned reads displayed.
GCGCCAGTCCTTCACCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTCATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAATGTTGTTCAATGTTGCAAA > CP009273/647090‑647378 | gcgcCAGTCCTTCACCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGc > 2:10899/1‑149 (MQ=255) cAGTCCTTCACCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGa > 1:1878885/1‑149 (MQ=255) gTCCTTCACCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAAt < 1:463645/149‑1 (MQ=255) tCCTTCACCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAAtt > 2:1036950/1‑149 (MQ=255) tCCTTCACCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAAtt < 2:3578550/149‑1 (MQ=255) tCCTTCACCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAAtt > 2:403920/1‑149 (MQ=255) cTTCACCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTgg < 1:1582656/149‑1 (MQ=255) ttCACCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTggg > 1:3869449/1‑149 (MQ=255) tCACCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGc < 2:866278/149‑1 (MQ=255) tCACCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGc < 1:2888750/149‑1 (MQ=255) aCCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGGTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTGTTATGCAGGAATTGGGCGa > 2:3185801/1‑149 (MQ=255) cgcgGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGAtt < 1:3370025/149‑1 (MQ=255) cggacggaTTCACTGATAGCAACGCATTTAATAATATTTCCGGCACTTCCACCGCACGCGATAAGCTTTTCTTCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTc < 1:4103846/149‑1 (MQ=255) cggacggaTTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTc < 1:4102971/149‑1 (MQ=255) cggacggaTTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTc < 1:504101/149‑1 (MQ=255) gacggaTTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCg > 2:890314/1‑149 (MQ=255) cggaTTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGcc > 1:3600665/1‑149 (MQ=255) ggaTTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCa < 1:1208456/149‑1 (MQ=255) tCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCAtttt > 2:2818749/1‑149 (MQ=255) cACTGATAGCAACGCATTAAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTCATGCAGGAATTGGGCGATTTCCGCCAttttt < 1:1476657/149‑1 (MQ=255) tGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTa > 2:3153170/1‑149 (MQ=255) tGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTa < 1:3946408/149‑1 (MQ=255) gATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTAt < 2:2033872/149‑1 (MQ=255) atcgCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTAtt < 2:143028/146‑1 (MQ=255) aTAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTAtt > 1:3523609/1‑149 (MQ=255) tAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTAttt < 2:1120485/149‑1 (MQ=255) tAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTAttt < 1:1371510/149‑1 (MQ=255) aGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTAtttt < 1:1278725/149‑1 (MQ=255) aGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTAtttt < 1:3193759/149‑1 (MQ=255) aGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTAtttt < 2:208310/149‑1 (MQ=255) gCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTAttttn < 1:2459576/149‑2 (MQ=255) gCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTc < 2:1127971/149‑1 (MQ=255) gCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTc < 2:2143423/149‑1 (MQ=255) cAACGGATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCt > 1:35925/1‑149 (MQ=255) cAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCt < 1:345459/149‑1 (MQ=255) aCGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTCATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGa > 1:1726017/1‑149 (MQ=255) cGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTCATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGaa < 1:2562822/149‑1 (MQ=255) gCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAAc > 1:752939/1‑149 (MQ=255) cATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACg > 2:3496474/1‑149 (MQ=255) cATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACg > 2:2205657/1‑149 (MQ=255) cATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACg > 2:460912/1‑149 (MQ=255) cATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACg > 2:128838/1‑149 (MQ=255) aTTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGt < 1:2808538/149‑1 (MQ=255) aTTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGt > 2:882479/1‑149 (MQ=255) tttAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGtt > 2:2656491/1‑149 (MQ=255) aataatATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTa < 1:2333366/149‑1 (MQ=255) aataTTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTAcgc < 2:2300341/149‑1 (MQ=255) tatTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTAAAAAAAATCTGAACGTTTTACGCgg > 2:1388031/1‑149 (MQ=255) gCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAat > 2:1266252/1‑149 (MQ=255) aaTTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAatat > 2:1444584/1‑149 (MQ=255) ttCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCa < 2:1705990/149‑1 (MQ=255) tCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCAt < 2:2001924/149‑1 (MQ=255) ccACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCAtt < 1:1448586/149‑1 (MQ=255) cACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTg > 2:630973/1‑149 (MQ=255) aCCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGc < 2:542488/149‑1 (MQ=255) aCCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATAATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGc < 1:2818749/149‑1 (MQ=255) ccGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGcc < 2:741015/149‑1 (MQ=255) gcgATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACat < 2:166110/149‑1 (MQ=255) gATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACataa > 1:1098847/1‑149 (MQ=255) gATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACataa > 1:2669689/1‑149 (MQ=255) aTAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACataat < 1:4084057/149‑1 (MQ=255) aaGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACAtaataa > 1:369059/1‑149 (MQ=255) aGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATaataaa > 2:3679421/1‑149 (MQ=255) gCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATaataaat < 1:1084403/149‑1 (MQ=255) cTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATaataaata < 1:3798043/149‑1 (MQ=255) ttttCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAg > 1:1623027/1‑149 (MQ=255) tttCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGt > 1:1718958/1‑149 (MQ=255) tCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCt < 1:1639271/149‑1 (MQ=255) cgGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGaa > 2:3708956/1‑149 (MQ=255) gggTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAg > 1:22950/1‑149 (MQ=255) ttACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTg < 1:604857/149‑1 (MQ=255) ttACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTg < 1:1745517/149‑1 (MQ=255) tACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGc < 2:3869449/149‑1 (MQ=255) cGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCAt < 2:35925/149‑1 (MQ=255) aataaataCTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCAtgttg < 2:3105992/149‑1 (MQ=255) aataaataCTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCAtgttg < 2:3107553/149‑1 (MQ=255) ataaataCTTCGAATGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCGATTTTTTTATTTTCTGAACGTTTTACGCGGTTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCAtgttgt < 2:1876077/149‑1 (MQ=255) taaataCTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATgttgtt > 2:2554761/1‑149 (MQ=255) aaataCTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTa < 2:1936789/149‑1 (MQ=255) aataCTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTAt < 2:3270468/149‑1 (MQ=255) ataCTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATc > 1:3106196/1‑149 (MQ=255) aCTTCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGa > 2:3940248/1‑149 (MQ=255) ttCGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGAtt < 1:1653286/149‑1 (MQ=255) cGACTGTGGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTg > 2:796119/1‑149 (MQ=255) tgtgGTGTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAAc > 1:1266955/1‑149 (MQ=255) tggtgTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGa > 2:3781231/1‑149 (MQ=255) ggtgTCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGaa > 1:1926074/1‑149 (MQ=255) gtgtCAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAAt > 2:311758/1‑149 (MQ=255) gtCAACGCTCAAATCATTTTCATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAAtgt > 1:275134/1‑149 (MQ=255) cAACGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAAtgttg > 1:213401/1‑149 (MQ=255) aCGCTCAAATCTTTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCAGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAATgttgtt < 2:2433694/149‑1 (MQ=255) cGCTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAATGTTGTTc > 1:861809/1‑149 (MQ=255) cTCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAATGTTGTTCaa > 2:3559810/1‑149 (MQ=255) tCAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAATGTTGTTCAAt > 1:3819066/1‑149 (MQ=255) cAAATCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAATGTTGTTCAATg < 2:3600665/149‑1 (MQ=255) aaTCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAATGTTGTTCAATGtt < 1:444629/149‑1 (MQ=255) aTCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAATGTTGTTCAATGTTg < 1:3164871/149‑1 (MQ=255) aTCATTTTTATGCAGGAATTGGGCGATTTCCGCCATTTATTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGGGCATGTTGTTATCGATTTGCTACGAATGTTGTTCAATGTTg > 1:3318041/1‑149 (MQ=255) ttttTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAATGTTGTTCAATGTTGCaaa < 2:1740507/149‑1 (MQ=255) ttttTATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAATGTTGTTCAATGTTGCaaa > 1:1543944/1‑149 (MQ=255) | GCGCCAGTCCTTCACCGCGGACGGATTCACTGATAGCAACGCATTTAATAATATTTCCGGCAATTCCACCGCACGCGATAAGCTTTTCATCGCGGGTTACGGTAATAAATACTTCGACTGTGGTGTCAACGCTCAAATCATTTTCATGCAGGAATTGGGCGATTTCCGCCATTTTTTTATTTTCTGAACGTTTTACGCGGGTGAAAATATCATTGCCGAACATAATAAATAGTATCCTGAAGGTGCATGTTGTTATCGATTTGCAACGAATGTTGTTCAATGTTGCAAA > CP009273/647090‑647378 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |