| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 763,425 | G→C | 12.9% | intergenic (+9/‑9) | mngA → / → mngB | fused 2‑O‑a‑mannosyl‑D‑glycerate specific PTS enzymes: IIA component/IIB component/IIC component/alpha‑mannosidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 763,425 | 0 | G | C | 12.9% | 408.7 / 14.2 | 137 | intergenic (+9/‑9) | mngA/mngB | fused 2‑O‑a‑mannosyl‑D‑glycerate specific PTS enzymes: IIA component/IIB component/IIC component/alpha‑mannosidase |
| Reads supporting (aligned to +/- strand): ref base G (79/33); new base C (2/17); total (82/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.47e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 143 total aligned reads displayed.
GCGCGGGCGGTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAAT > CP009273/763277‑763572 | gcgcGGGCGGTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTACTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAgg < 1:2754014/149‑1 (MQ=255) cgcgGGCGGTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGa < 1:720334/149‑1 (MQ=255) gcgggcggTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGaa < 2:804623/149‑1 (MQ=255) gcgggcggTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGaa < 2:1355222/149‑1 (MQ=255) gcgggcggTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGaa < 2:1490820/149‑1 (MQ=255) gcgggcggTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGaa < 2:2232131/149‑1 (MQ=255) cgggcggTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGaaa < 1:1226913/149‑1 (MQ=255) cgggcggTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGaaa < 2:797814/149‑1 (MQ=255) gcggTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAacga < 1:3425036/149‑1 (MQ=255) gcggTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAacga > 1:3633405/1‑149 (MQ=255) ggTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCTTTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAacgacg < 2:2273331/149‑1 (MQ=255) tgtTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGAt > 2:2943661/1‑149 (MQ=255) tgtGGGTGGTTTGGCGCGGCTTTGGTGGGGGCTGAAATCTCGACTGCAA‑TTCTCCTGTGGTGGCGGCTTCACGGGGTTAAGCAGGGCAACTATCTGACTGCGGGCGTAATGCAATAAACAAAAAGGACACGACGATGAAAGCAGTAtct < 2:626254/147‑1 (MQ=255) tGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACAt > 2:28235/1‑149 (MQ=255) ggCGGGGCTTGGGGGGGGGCTCAAACCTCGAC‑GCAATTTCTCGTGTGGGGGCGGCGTCCCGGGTTTACGCAGGCCAACTATCTGACTGTTGGCTTAATGCAAAAAACAAAACGCAAACGACGATGAAAGCAGTATCTCGCGTTCACATc < 2:498490/149‑1 (MQ=255) cgGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCTTAATGCCATAAAAAAAATGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCAccc < 2:4084796/149‑1 (MQ=255) gCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCg > 1:1625681/1‑149 (MQ=255) gCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCg > 1:1625318/1‑149 (MQ=255) gCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCg > 1:1625309/1‑149 (MQ=255) aTTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCa > 1:1074161/1‑149 (MQ=255) aTTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCa > 1:1074165/1‑149 (MQ=255) ttGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCat > 2:10484/1‑149 (MQ=255) tggtggGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCata > 2:884203/1‑149 (MQ=255) tggtggGGGCTGCAATCTCGACTGAAA‑TTCTCCTGTTGTGGCGGCGTCACGCGTTTAAGCATGGAAACTATCGGACTGTTGGCGTAATGCCATAAACAAAATGTAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCata < 2:332510/149‑1 (MQ=255) tggtggGGGCTGCAATCTCGACTCCAA‑TTCTCCTTTTGGGGCGGCGACAGGGTTTTAAGAATGCAAAATATCTTAGTGTTGGCTTATTCCAATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCata < 2:373992/149‑1 (MQ=255) tggtggGGGCTGCAATCTCGACGGCAT‑TTCTCCTGATGGGGCGGCGTCCCGGGGTTAAGCATGGCAACTTTCTGACTGTTGGCGTATTGCCATAAACAAAAAGGACACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCata < 2:650390/149‑1 (MQ=255) gtggGGGCTGCAATCTCGACTGAAA‑TTCTCCTGTTGTGGCGGGGTCACGCGTTTAAGCATGGAAACTATCTGACTGTTGGCGTAAGGCAATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATg < 2:3822725/149‑1 (MQ=255) gggggCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCa > 1:3907918/1‑149 (MQ=255) ggggCTGCAATCTCGACTGCAA‑TTCTCGTGAGGTGGGGGCGTCACGGGTTTAAGCATGGCAACTATCTGACTGTGGGCTTAATGCAATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCAc < 2:3627197/149‑1 (MQ=255) tGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGa > 1:3729436/1‑149 (MQ=255) cAATCTCGACTCAAT‑TTCTCCTGTTGGGGCGGCTCCAGGGGGTTAAGATTGGAAAATAGCTGACTGAGGGCTTAAGGCAAAAAAAAAAAAGCCCACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATc < 1:2256596/149‑1 (MQ=255) aTCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCga > 1:2599747/1‑149 (MQ=255) tctcGACGGAAT‑TTCTCCTTTTGGGGCGGCGTCACGCTTTTAAGATTGGCAACTATCTGACTGATGGCTTAATGCAAAAAAAAAAAAGGACACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCgag < 1:341927/149‑1 (MQ=255) tcgcGACTGAAT‑TTCTCCTGTTGGGGCGGCGTCCCGCGGTAAAGCATGCCAAATATCTGACTGTGGGCGTACTGCAAAAAAAAAAAAGGACACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCgag < 1:2712437/146‑1 (MQ=255) ctacagCAA‑TCCGCCTGTTGAGGCGCCGTCACGCGCTAAACCCTGCCAACTATCTCACTGTGGCCTTAATCCAATAAAAAAAAAGGACACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGt < 2:1085191/144‑1 (MQ=255) gACTTCAA‑TTCGCCTGTTGTGGCGGCGTCACGCGTTTAAGCATGCAAACTATCTGACTGTTGGCTTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTg < 2:3956813/149‑1 (MQ=255) gACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTg > 2:2432381/1‑149 (MQ=255) gACTGAAA‑TTCTCCTGTGGGGGCGGCGTCACGGGTTTAAGCTGGGCAACTATCTGAGTTTGGGCTTAATGAAAAAAAAAAAAAGCAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTg < 1:2616896/149‑1 (MQ=255) cTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGt > 2:1416735/1‑149 (MQ=255) a‑TTCTCTGGTTGGGGCGGGGACACGCGGTTACGCAGGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAACGCAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTc < 2:3649302/149‑1 (MQ=255) a‑TTCTCCTGTTGTGGCGGCGTCAGGCGTTTACGCTTTCCAACTATCTTACTGATGGCTTAATGCAATAAACAAAAAGCAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTc < 2:1088108/149‑1 (MQ=255) a‑TTCGCCGGATGGGGCGGCGTCCCGCGTTTAAGCAGGGCAACTATCGGACTGTGGGCGTAATGCCAAAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTc < 2:1602559/149‑1 (MQ=255) ctcCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTcacc > 2:3051480/1‑149 (MQ=255) tcCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTcacca > 1:2484052/1‑149 (MQ=255) tcCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTcacca > 2:1796794/1‑149 (MQ=255) ttgttggggcggcggcCCGGGTTTACGCTTGCCAACTATCTGAGTGTTGGCTTATGCCCATAAACAAAAAGCAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCaccacc < 1:2486667/142‑1 (MQ=255) gATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGa > 1:3193154/1‑149 (MQ=255) gATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGa > 1:1227813/1‑149 (MQ=255) gcggggTCCCGCGGTTAAGAAGGGCAACTAGCTGACTGTGGGCGTAATCCCATAAACAAAAAGCAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTc < 2:838680/149‑1 (MQ=255) gcggcgACACGCGGTTAAGCATGGCAACTATCTCACTGATGGCGAAATGCAAAAAACAAAAAGTAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTc < 2:3334494/149‑1 (MQ=255) cggcgTCACGGGTTTAAGCTTGCAAACTAGCTGATTTTTGGCTTAAGGAAATAAACAAAAAGCACACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCa < 1:1584662/149‑1 (MQ=255) gTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTa > 2:1805547/1‑149 (MQ=255) tCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTAt > 2:349348/1‑149 (MQ=255) aCGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTc > 1:407942/1‑149 (MQ=255) aCGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTc > 1:2855354/1‑149 (MQ=255) tgTTAAGAATGGAAAATATCTGACTGTTGGCGTAATCCAAAAAAAAAAAAGCAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTctgct < 1:690348/148‑1 (MQ=255) aaGCATGGCAACTTTCTGCCTGAGGGCGTAATGCCAAAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTc < 1:603017/149‑1 (MQ=255) gcttGGCAACTATCTGACTGTTGGCGTAATGCAATAAACAAAAAGTAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCaa < 2:2276712/146‑1 (MQ=255) aTGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCaata > 1:1871609/1‑149 (MQ=255) tGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCaataa > 1:1410952/1‑149 (MQ=255) gaaaCTATCTGACTTATGGCTTAATGACATAAACAAAATGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAataata < 2:4053820/147‑1 (MQ=255) gCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAataata > 2:1261529/1‑149 (MQ=255) aCTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCTTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATgg > 1:2850442/1‑149 (MQ=255) aCTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATgg > 1:2380354/1‑149 (MQ=255) cTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGa > 2:2761612/1‑149 (MQ=255) cTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGa > 2:2761839/1‑149 (MQ=255) tCTGACTGATGTCTTAATGCAATAAAAAAAAAGTAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAaga < 2:2111095/149‑1 (MQ=255) tCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAaga > 2:3359646/1‑149 (MQ=255) tgactgaTGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAgaga > 2:3394548/1‑149 (MQ=255) tgactgaTGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACAACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAgaga > 2:550080/1‑149 (MQ=255) actgaTGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATc > 1:284163/1‑149 (MQ=255) tgaTGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCt > 1:1080361/1‑149 (MQ=255) gaTGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCtg > 1:2456128/1‑149 (MQ=255) aTGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCtgt > 2:1692048/1‑149 (MQ=255) aTGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCtgt > 2:1607832/1‑149 (MQ=255) aTGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCtgt > 1:2374758/1‑149 (MQ=255) aTGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCtgt > 2:1692322/1‑149 (MQ=255) gCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGcc > 1:2298335/1‑149 (MQ=255) gTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGa > 2:263966/1‑149 (MQ=255) tattgaaaTAAAAAAAAAGCACACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGAc < 1:2943661/142‑1 (MQ=255) tAATGCCATAAACAAAAAGGAAACGACGATGAAAGAAGTATCTCGCGTTCACATCACCCCGCATATGCACATGGATCGAGAGTGGTATTTCACCACAGAAGAGTCACGAATACTGCTGGTCAAAAATATGCAAGAGATCCTCAGCCGAc > 1:2360043/1‑149 (MQ=255) tAATGCAATAAAAAAAAAGCACACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGAc < 2:1074161/149‑1 (MQ=255) aTGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTg > 1:3028671/1‑149 (MQ=255) aTGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTg > 1:3028679/1‑149 (MQ=255) aTGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTg > 2:2553630/1‑149 (MQ=255) aTGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTg > 1:939701/1‑149 (MQ=255) gCCATAAACAACATGTAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGa < 2:2586142/149‑1 (MQ=255) gCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGa > 2:54316/1‑149 (MQ=255) ccATAAAAAAAATGCACACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGaa < 1:2708952/149‑1 (MQ=255) aTAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACa > 1:1808279/1‑149 (MQ=255) aTAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACa > 1:2588848/1‑149 (MQ=255) aaCAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGa > 1:3912272/1‑149 (MQ=255) aaCAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGa > 1:3767230/1‑149 (MQ=255) aaCAAAAACGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGa < 2:3223329/149‑1 (MQ=255) aaaaaGTAAACGACGATGAAAGCAGTATCTCGCGTTCACAACAACCCGCATATGCACAGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGAATTCAGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACaa > 2:1334200/1‑149 (MQ=255) aaaaaGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACaa > 1:2467432/1‑149 (MQ=255) aaGCAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGa > 1:3320930/1‑149 (MQ=255) ggAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAAt < 2:1625318/149‑1 (MQ=255) ggAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAAt > 2:128439/1‑149 (MQ=255) ggAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAAt < 2:1625309/149‑1 (MQ=255) | GCGCGGGCGGTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAA‑TTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAAACAAAAAGGAAACGACGATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAAT > CP009273/763277‑763572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |